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1.
三江源国家公园不同草地土壤微生物功能基因的差异性分析 总被引:1,自引:0,他引:1
土壤微生物在陆地生物地球化学循环过程中起着非常重要的作用。为了探索青藏高原高寒草地类型地上植被特性和地下土壤环境与土壤微生物功能基因之间关系,以三江源国家公园高寒草原、高寒沼泽化草甸及高寒草甸3种典型草地类型为研究对象,利用基因芯片(GeoChip 5.0)技术测定其微生物功能基因丰度,并分析它们之间的差异及影响因素。结果表明:(1)3种草地类型地上群落结构和地下土壤环境存在差异性,其中高寒草原物种多样性指数、pH值较高,沼泽化草甸中土壤含水量、微生物量碳、地上生物量、土壤速效氮含量较高,高寒草甸中则是土壤微生物量氮含量较高;(2)3种高寒草地类型的碳循环、氮循环、磷循环、有机修复的土壤微生物功能基因丰度存在显著差异,其中这些功能基因的丰度在高寒沼泽化草甸最高,高寒草甸、高寒草原次之;(3)地上植物物种多样性虽对功能基因丰度变化的解释率(r2)在57.1%-61.2%之间,但统计学上不显著(P>0.05),而微生物基因丰度随地上生物量的增加而增加,且解释率(r2)为77.5%-80.0%(P<0.05)。在pH、土壤含水量、土壤微生物量等地下土壤环境因子中,pH对功能基因丰度存在显著影响(P<0.01)解释率在83.4%-87.5%间,且土壤微生物功能基因丰度随土壤pH的增加而降低;土壤含水量、土壤微生物量对土壤微生物功能基因丰度的解释率分别为81.9%-83.1%(P<0.05)和76.8%-86.2%(P<0.05),微生物功能基因丰度随这两者含量的增加呈上升趋势。进一步运用RDA分析发现,pH、土壤微生物量、地上生物量是影响微生物功能基因丰度的主要因子,其中土壤微生物量是土壤有机质的重要组成部分,土壤有机质又是通过地上植被凋落物沉积所得到的。因此,地上植被特性的自上而下控制因子影响了土壤环境中自下而上的控制因子,间接的影响了微生物功能基因丰度。由此得出,地上植被特性和地下土壤环境因子共同作用控制了微生物功能基因丰度使其出现差异性。 相似文献
2.
By the 454 pyrosequencing technology, this research compared the bacterial communities in poplar plantation rhizosphere and bulk soil for an accurate understanding of bacterial community colonization in the two soil environments. The species annotation showed that rhizosphere soil contained 145 bacterial genera and bulk soil contained 141 bacterial genera, with 8 common genera shared by both at a relative abundance of more than 4%. The 8 genera in common were Acidobacterium GP1, Acidobacterium GP3, Acidobacterium GP6, Gemmatimonas, Bradyrhizobium, Burkholderia, Streptomyces and Acidobacterium GP4. The relative abundance of the same bacterial community was significantly different between rhizosphere and bulk soil environments. Alpha diversity analysis showed that the bacterial community diversity of rhizosphere soil was higher than that of bulk soil, but the difference was not significant. The results of bacterial communities sorting could reflect the variation of soil bacterial communities from rhizosphere to the bulk and the spatial variation among different sampling points, indicating a contribution of about 21.2% variance of bacterial communities by the effect of rhizosphere. Beta diversity analysis showed great difference between rhizosphere and bulk soil samples in bacterial community composition. There were 15 genera specific to rhizosphere soil and 11 to bulk soil. The abundance of 23 genera, mainly cellulose degrading bacteria and nitrogen-fixing bacteria, changed significantly. Selectivity of root to rhizosphere microorganisms is an important mechanism leading to significant differences in the rhizosphere microbial community composition and structure, which may significantly impact the carbon and nitrogen cycles of the root-soil interface. 相似文献
3.
Yuhong Su Xueyun Yang Cary T. Chiou 《Frontiers of Environmental Science & Engineering》2008,2(4):468-474
To access the influence of a vegetation on soil microorganisms toward organic pollutant biogegration, this study examined the rhizospheric effects of four plant species (sudan grass, white clover, alfalfa, and fescue) on the soil microbial community and in-situ pyrene (PYR) biodegradation. The results indicated that the spiked PYR levels in soils decreased substantially compared to the control soil without planting. With equal planted densities, the efficiencies of PYR degradation in rhizosphere with sudan grass, white clover, alfalfa and fescue were 34.0%, 28.4%, 27.7%, and 9.9%, respectively. However, on the basis of equal root biomass the efficiencies were in order of white clover >> alfalfa > sudan > fescue. The increased PYR biodegradation was attributed to the enhanced bacterial population and activity induced by plant roots in the rhizosphere. Soil microbial species and biomasses were elucidated in terms of microbial phospholipid ester-linked fatty acid (PLFA) biomarkers. The principal component analysis (PCA) revealed significant changes in PLFA pattern in planted and non-planted soils spiked with PYR. Total PLFAs in planted soils were all higher than those in non-planted soils. PLFA assemblages indicated that bacteria were the primary PYR degrading microorganisms, and that Gram-positive bacteria exhibited higher tolerance to PYR than Gram-negative bacteria did. 相似文献
4.
Jun QIAO Chengdong ZHANG Shuiming LUO Wei CHEN 《Frontiers of Environmental Science & Engineering》2014,8(2):293-304
This study evaluated the effectiveness of different amendments--including a commercial NPK fertilizer, a humic substance (HS), an organic industrial waste (NovoGro), and a yeast-bacteria consortium--in the remediation of highly contaminated (up to 6% of total petroleum hydrocarbons) oilfield soils. The concentrations of hydrocarbon, soil toxicity, physicochemical properties of the soil, microbial population numbers, enzyme activities and microbial community structures were examined during the 90-d incubation. The results showed that the greatest degradation of total petroleum hydro- carbons (TPH) was observed with the biostimulation using mixture of NPK, HS and NovoGro, a treatment scheme that enhanced both dehydrogenase and lipase activities in soil. Introduction of exogenous hydrocarbon-degrading bacteria (in addition to biostimulation with NPK, HS and NovoGro) had negligible effect on the removal of TPH, which was likely due to the competition between exogenous and autochthonous microorganisms. None- theless, the addition of exogenous yeast-bacteria consor- tium significantly enhanced the removal of the aromatic fraction of the petroleum hydrocarbons, thus detoxifying the soil. The effect of bioaugmentation on the removal of more recalcitrant petroleum hydrocarbon fraction was likely due to the synergistic effect of bacteria and fungi. 相似文献
5.
石油污染与微生物群落结构的相互影响 总被引:4,自引:2,他引:4
从两种土壤中分别分离出石油烃降解菌,并从中筛选出6株石油烃高效降解菌A1、A2、A6、A8和B2及B5,然后将各菌株鉴定至属,分别为A1假单胞菌属、A2鞘氨醇单胞菌属、A6微球菌属、A8节杆菌属、B2不动杆菌属和B5诺卡氏菌属。另外对比分析了单菌株及不同菌株重组对不同石油烃组分的利用情况,结果发现,从不同石油污染的土壤中分离到的菌株对石油烃组分的利用能力不同,从胜利原油污染的土壤中分离到的菌株A1、A2、A6和A8对石油烃组分的利用范围窄,主要利用饱和烃组分;而从经芳香烃驯化过的土壤中分离到的菌株B2及B5对石油烃利用组分的利用范围较宽,能同时利用饱和烃和芳香烃组分。 相似文献
6.
The adding of a mixed culture of marine hydrocarbon-degrading bacteria to petroleum polluted seawater did not increase the hydrocarbon degradation capability of the water. All the strains of the mixed culture disappeared from the dominant microflora while the autochthonous bacteria showed a capacity for adaptation to petroleum degradation about four days after the oil spill. This confirms the advantage of natural bacterial communities. The oil spilled on the sea surface evolved very quickly under the influence of abiotic factors such as sunlight. Aromatic petroleum fractions were oxidized and polymerized. This chemical evolution causes a drastic decrease of the biodegradability of crude oil. 相似文献
7.
Jibin Li Jinxing Ma Li Sun Xin Liu Huaiyu Liao Di He 《Frontiers of Environmental Science & Engineering》2022,16(7):86
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9.
对克拉玛依采集的部分石油污染土壤进行了筛选,得到了5组石油烃高效降解混合菌,其中混合菌KL9-1在45℃的条件下,通过7 d的降解,稀油的降解率达到43.27%,稠油的降解率达到20.09%。混合菌KL9-1经过多次分离纯化后,获得3株具有石油烃降解能力的优势单菌,3株单菌对稀油的降解率都在30%以上。结合分离单菌株的形态、生理生化特征和16S rDNA基因序列的分析结果,初步鉴定KL9-1-1为Pseudomonas putida,KL9-1-2和KL9-1-3为Pseudomonas sp.。 相似文献
10.
Simone Cappello Santina Santisi Rosario Calogero Christoph Gertler Francesca Crisafi 《Chemistry and Ecology》2013,29(3):239-252
A number of previous studies have shown that the relationships of symbiosis existing between mussels and microorganisms are directly dependent on the environmental conditions. However, little is known about existing relationships between mussels and bacteria in hydrocarbon-impacted marine environments. The aim of this preliminary study is to investigate the presence of oil-degrading bacteria in the mussel Mytilus galloprovincialis during growth in polluted ecosystems. All the experiments were carried out in a mesocosm system designed to simulate chronic pollution and to enable direct exposure of mussels to chemicals. Quantitative (4′,6-diamidino-2-phenylindole, colony-forming units, Most Probable Number) analyses and screening (presence/absence) of metabolic functional genes were performed to analyse bacterial populations inside the gills of mussels exposed and not exposed to hydrocarbons. The data obtained show that the presence of hydrocarbons affected the abundance of bacteria inside the gills of specimens and determines selection for specific (hydrocarbon-degrading) bacteria (i.e. Alcanivorax sp. and Marinobacter sp.). However, is not yet clear whether the presence of such genera of bacteria inside the mussel is due to symbiosis or as a result of filtration. 相似文献
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12.
Zhenyi Zhang Xuan Zhao Yuting Liang Guanghe Li Jizhong Zhou 《Environmental Chemistry Letters》2013,11(1):11-17
This report shows an increase of PAH-related microbial functional genes with PAH concentration in soils. Adaptation of microbial communities to organic pollutants such as polycyclic aromatic hydrocarbons (PAHs) is a crucial issue. However, there is little knowledge on mechanisms ruling microbial community selection. Here, we studied microbial functional genes in soils contaminated by PAHs. We used GeoChip, an advanced functional gene array for gene analysis. Soil PAH concentrations were measured and microbial functional genes were categorized. PAH-related microbial functional genes, bph, nah, nidA, phd, dfb, and qor, were quantitatively expressed. Total microbial functional genes and PAH-related microbial functional genes were compared with PAH concentration by cluster analysis and curve-fitting analysis. We found that the average abundance of PAH-related microbial functional genes increased from 0.13 to 0.33, whereas that of total microbial functional genes decreased from 0.22 to 0.10 when PAHs concentration increased from 1.01 to 164.28 mg kg?1. It was also found that the classification of microbial community structure characteristics based on PAH-related microbial functional genes was closely similar to the classification based on PAHs concentration. Findings reveal that PAH stress promotes the dominance of PAH-related microbial communities. 相似文献
13.
石油烃作为一类持久性难降解有机污染物对土壤环境质量产生严重的危害。以天津大港油田原油污染土壤中筛选出的耐低温高效石油烃降解菌为靶细胞,以小麦、紫花苜蓿作为供试植物,利用盆栽试验,对植物-外源菌协同修复体系中的脱氢酶活性和土壤微生物多样性进行研究,分析其变化及其与石油烃降解率的关系。结果表明植物-微生物协同修复对石油烃具有较好的降解能力,其中小麦-固定化外源菌组具有最高的降解率,石油烃含量从最初的30 600 mg獉kg-1下降为24 300 mg獉kg-1,降解率为20.6%,并且其试验后期石油烃的降解率最大,远远高于其他时期,表现出良好的修复潜力。外源菌投加的初始阶段会迅速提高脱氢酶活性,然而这种影响随着降解时间延长而逐渐减弱。初期脱氢酶活性与总石油烃的降解存在较好的相关性,脱氢酶活性可以在一定程度上表征土壤石油烃的降解情况。微生物多样性与总石油烃降解也存在一定的相关性。 相似文献
14.
Milan Novakovi? Muftah Mohamed Ali Ramadan Tatjana ?olevi? Knudsen Mali?a Anti? Vladimir Be?koski Gordana Gojgi?-Cvijovi? Miroslav M. Vrvi? Branimir Jovan?i?evi? 《Environmental Chemistry Letters》2012,10(3):287-294
Phenanthrene and methyl-phenanthrenes are major aromatic pollutants originating in particular from fuel oil. Phenanthrene is usually degraded faster than methyl-phenanthrenes under geological and environmental conditions. Here, we report a preferential and accelerated biodegradation of methyl-phenanthrenes versus phenanthrene in soil contaminated by fuel oil. The polluted soil was mixed with sawdust and sand to form a homogenized biopile. The biopile was continuously sprayed with microbial consortia isolated from crude oil?Ccontaminated soil and treated by biosurfactants and nutritive substances for biostimulation. During a 6-month bioremediation experiment, a steady increase in the relative abundance of phenanthrene compared to methyl-phenathrenes was observed by gas chromatography?Cmass spectrometry. The increase was the highest for trimethyl-phenanthrenes, with a phenanthrene/trimethyl-phenanthrenes ratio increasing from 0.42 to 2.45. By contrast, the control, non-stimulated samples showed a ratio decrease from 0.85 to 0.11. Moreover, the results showed that the level of degradability depends on the number of methyl groups. 相似文献
15.
Soils from two typical tidal salt marshes with varied salinity in the Yellow River Delta wetland were analysed to determine possible effects of salinity on soil carbon sequestration through changes in soil microbiology. The mean soil respiration (SR) of the salt water–fresh water mixing zone (MZ) was 2.89 times higher than that of the coastal zone (CZ) (4.73 and 1.63?μmol?m?2?s?1, respectively, p?.05), and soil dehydrogenase activity was the main microbial factor influencing SR. In addition to the higher soil microbial biomass, the MZ had more β-Proteobacteria than the CZ, as well as some specific bacteria with strong heterotrophic metabolic activity such as Pseudomonas sp. and Limnobacter sp. that might have led to its higher dehydrogenase activity and respiratory rates. Additionally, the CZ possessed more Halobacteria and Thaumarchaeota with the ability to fix CO2 than the MZ. Significantly lower soil salinity in MZ (4.25?g?kg?1) was suitable for β-Proteobacteria, but detrimental for Halobacteria compared with CZ (7.09?g?kg?1, p?.01), which might lead to the lower microbial decomposition capacity of soils in CZ. As a result, the CZ has a higher soil organic carbon content than the MZ. 相似文献
16.
To access the influence of a vegetation on soil microorganisms toward organic pollutant biogegration, this study examined the rhizospheric effects of four plant species (sudan grass, white clover, alfalfa, and fescue) on the soil microbial community and in-situ pyrene (PYR) biodegradation. The results indicated that the spiked PYR levels in soils decreased substantially compared to the control soil without planting. With equal planted densities, the efficiencies of PYR degradation in rhizosphere with sudan grass, white clover, alfalfa and fescue were 34.0%, 28.4%, 27.7%, and 9.9%, respectively. However, on the basis of equal root biomass the efficiencies were in order of white clover >> alfalfa > sudan > fescue. The increased PYR biodegradation was attributed to the enhanced bacterial population and activity induced by plant roots in the rhizosphere. Soil microbial species and biomasses were elucidated in terms of microbial phospholipid ester-linked fatty acid (PLFA) biomarkers. The principal component analysis (PCA) revealed significant changes in PLFA pattern in planted and non-planted soils spiked with PYR. Total PLFAs in planted soils were all higher than those in non-planted soils. PLFA assemblages indicated that bacteria were the primary PYR degrading microorganisms, and that Gram-positive bacteria exhibited higher tolerance to PYR than Gram-negative bacteria did. 相似文献
17.
Kijune Sung Jaisoo Kim C.L. Munster M. Yavuz Corapcioglu Soyoung Park M.C. Drew Y.Y. Chang 《Ecological modelling》2006,190(3-4):277-286
Microorganisms make an important contribution to the degradation of contaminants in bioremediation as well as in phytoremediation. An accurate estimation of microbial concentrations in the soil would be valuable in predicting contaminant dissipation during various bioremediation processes. A simple modeling approach to quantify the microbial biomass in the rhizosphere was developed in this study. Experiments were conducted using field column lysimeters planted with Eastern gamagrass. The microbial biomass concentrations from the rhizosphere soil, bulk soil, and unplanted soil were monitored for six months using an incubation–fumigation method. The proposed model was applied to the field microbial biomass data and good correlation between simulated and experimental data was achieved. The results indicate that plants increase microbial concentrations in the soil by providing root exudates as growth substrates for microorganisms. Since plant roots are initially small and do not produce large quantities of exudates when first seeded, the addition of exogenous substrates may be needed to increase initial microbial concentrations at the start of phytoremediation projects. 相似文献
18.
Kun Li Tingming Ye Wang Zhang Jianfeng Peng Yaohui Bai Weixiao Qi Huijuan Liu 《Frontiers of Environmental Science & Engineering》2022,16(2):17
19.
微生物是组成生态系统的重要成员,在污染物去除中发挥着重要作用,是生物修复中的主力,然而在石油污染修复过程中,石油烃的疏水性会限制微生物对石油的降解,但一些微生物的细胞代谢物即生物表面活性剂,它是微生物在一定条件下代谢分泌产生的具有一定表面活性,集亲水基和疏水基结构于一分子的两亲性化合物,可以促进油的乳化,提高油的分散程度,增大菌株和油珠的接触机会,促进对石油烃的吸收和降解。在实验室分离得到了7株产表面活性剂石油降解菌株,经分子鉴定可知菌1和菌2都为粘质沙雷氏菌Serratia marcescens,菌3为居植物柔武氏菌Raoultella planticola,菌4,菌6和菌7都为克雷伯氏菌Klebsiella variicola,菌5为蜡状芽孢杆菌Bacillus cereus。主要研究了它们的生长与表面活性剂物质分泌状况的关系,发现随着时间增加,OD值随之增大,表面张力呈现下降趋势;并对菌株产物进行提取和薄层层析,离子型分析和红外光谱分析,初步判断其产物均为阴离子糖脂类;通过pH,初始油质量浓度,接种量和盐度4个单因素的变化研究菌1粘质沙雷氏菌,菌3居植物柔武士菌,菌5蜡状芽孢杆菌和菌6克雷伯氏菌对石油类物质降解能力,发现菌3居植物柔武氏菌和菌5蜡状芽孢杆菌降解性能较好;通过响应曲面法优化蜡状芽孢杆菌的降解条件,得出其最佳降解条件为pH为5.02,油质量浓度为3 g·L-1,接种量为1199.98μL,盐度为0.5 g·L-1时,在此条件下,菌株对石油的降解率为66.94%。 相似文献
20.
Tao Ya Zhimin Wang Junyu Liu Minglu Zhang Lili Zhang Xiaojing Liu Yuan Li Xiaohui Wang 《Frontiers of Environmental Science & Engineering》2023,17(5):60