Genetic differentiation among populations of a broadcast spawning soft coral, Sinularia flexibilis, on the Great Barrier Reef

The genetic structure of 12 reef populations of the soft coral Sinularia flexibilis (Octocorallia, Alcyoniidae) was studied along the Great Barrier Reef (GBR) at a maximum separation of 1,300 km to investigate the relative importance of sexual and asexual reproduction, genetic differentiation and gene flow among these populations. S. flexibilis is a widely distributed Indo-Pacific species and a gamete broadcaster that can form large aggregations of colonies on near-shore reefs of the GBR. Up to 60 individuals per reef were collected at a minimum sampling scale of 5 m at two sites per reef, from December 1998 to February 2000. Electrophoretic analyses of nine polymorphic allozymes indicated that genotypic frequencies in most populations and loci did not differ significantly from those expected from Hardy–Weinberg predictions. Analysis of multi-locus genotypes indicated a high number of unique genotypes (N _go) relative to the number of individuals sampled (N) in each reef population (range of 0.69–0.95). The maximum number of individuals likely to have been produced sexually (N*) was similar to the number of individuals sampled (i.e. N*:N ˜ 1), suggesting that even repeated genotypes may have been produced sexually. These results demonstrated a dominant role of sexual reproduction in these populations at the scale sampled. Significant genetic differentiation between some populations indicated that gene flow is restricted between some reefs (F _ST=0.026, 95% CI= 0.011 − 0.045) and even between sites within reefs (F _ST=0.041, 95% CI=0.027 − 0.055). Nevertheless, there was no relationship between geographic separation and genetic differentiation. Analyses comparing groups of populations showed no significant differentiation on a north-south gradient in the GBR. The pattern in the number of significant differences in gene frequencies in pairwise population comparisons, however, suggested that gene flow may be more restricted among inner-shelf reef populations near to the coast than among mid/outer-shelf populations further from the coast. Received: 10 July 2000 / Accepted: 5 October 2000     

The 1998 bleaching event and its aftermath on a coral reef in Belize

Widespread thermal anomalies in 1997-1998, due primarily to regional effects of the El Niño-Southern Oscillation and possibly augmented by global warming, caused severe coral bleaching worldwide. Corals in all habitats along the Belizean barrier reef bleached as a result of elevated sea temperatures in the summer and fall of 1998, and in fore-reef habitats of the outer barrier reef and offshore platforms they showed signs of recovery in 1999. In contrast, coral populations on reefs in the central shelf lagoon died off catastrophically. Based on an analysis of reef cores, this was the first bleaching-induced mass coral mortality in the central lagoon in at least the last 3,000 years. Satellite data for the Channel Cay reef complex, the most intensively studied of the lagoonal reefs, revealed a prolonged period of elevated sea-surface temperatures (SSTs) in the late summer and early fall of 1998. From 18 September to 1 October 1998, anomalies around this reef averaged +2.2°C, peaking at 4.0°C above the local HotSpot threshold. In situ temperature records from a nearby site corroborated the observation that the late summer and early fall of 1998 were extraordinarily warm compared to other years. The lettuce coral, Agaricia tenuifolia, which was the dominant occupant of space on reef slopes in the central lagoon, was nearly eradicated at Channel Cay between October 1998 and January 1999. Although the loss of Ag. tenuifolia opened extensive areas of carbonate substrate for colonization, coral cover remained extremely low and coral recruitment was depressed through March 2001. High densities of the sea urchin Echinometra viridis kept the cover of fleshy and filamentous macroalgae to low levels, but the cover of an encrusting sponge, Chondrilla cf. nucula, increased. Further increases in sponge cover will impede the recovery of Ag. tenuifolia and other coral species by decreasing the availability of substrate for recruitment and growth. If coral populations are depressed on a long-term basis, the vertical accretion of skeletal carbonates at Channel Cay will slow or cease over the coming decades, a time during which global-warming scenarios predict accelerated sea-level rise.     

Synchronous spawnings of 105 scleractinian coral species on the Great Barrier Reef

Following observations of mass spawning of hermatypic corals on the Great Barrier Reef in 1981 and 1982, spawning dates were successfully predicted and documented at five reefs on the Central and Northern Great Barrier Reef in 1983. During the predicted times, 105 species from 36 genera and 11 families were observed to spawn. Of these, 15 species were shown to have an annual gametogenic cycle. All but two of the species observed during mass spawnings shed gametes which underwent external fertilization and development. Synchronous spawning was observed both within and between the five reefs studied, which were separated by as much as 5° of latitude (500 km) or almost a quarter of the length of the Great Barrier Reef. The mass spawning of corals took place on only a few nights of the year, between the full and lastquarter moon in late spring. Maturation of gametes coincided with rapidly rising spring sea temperatures. Lunar and diel cycles may provide cues for the synchronization of gamete release in these species. The hour and night on which the greatest number of species and individuals spawned coincided with low-amplitude tides. Multispecific synchronous spawning, or mass spawning, of scleractinian and some alcyonacean corals represents a phenomenon which is, so far, unique in both marine and terrestrial communities.     

Disease and cell death in white syndrome of Acroporid corals on the Great Barrier Reef

White syndromes (WS) are among the most prevalent coral diseases, and are responsible for reef demise on the Great Barrier Reef. The disease manifests as a clear differentiation between tissue and exposed skeleton and results in rapid tissue loss. Fluorescence in situ hybridisation (FISH) was used in conjunction with histology and transmission electron microscopy (TEM) to investigate bacterial communities and cell death associated with WS. No evidence of bacterial communities or microbial association (using six bacterial probes, TEM and histopathology) was evident within the lesion or adjacent tissues, despite the presence of dense possible secondary invaders in the exposed skeletal regions. Despite widespread reference to necrosis in coral disease literature, there was no evidence of necrosis in any WS lesion or the adjacent tissues in this study. However, in situ end labelling, light microscopy and TEM of WS and healthy coral tissue sections showed evidence of extensive programmed cell death (PCD) exclusively in WS. This study provides the first evidence of intrinsic or PCD as a primary mechanism of cell death in WS, and may provide some explanation for the failure to isolate pathogens from over 80% of identified coral diseases, many of which show similar lesion patterns and WS characteristics.     

Rates of nitrogen fixation on coral reefs across the continental shelf of the central Great Barrier Reef

This study was undertaken in 1981 to determine whether there were major variations in potential rates of nitrogen fixation on apparently bare coralline substrate from reefs across the continental shelf of the central Great Barrier Reef. Nitrogen fixation, measured as rates of ethylene production (nmol cm^-2h^-1), was significantly lower on substrata from two inner-shelf reefs, (0.46 and 1.07) than on two middle-shelf reefs (2.10 and 2.97) and on two outer-shelf reefs (3.20 and 3.81). By contrast, algal biomass (mg cm^-2) on experimental substrate was significantly higher on inner-shelf reefs (80.8 and 59.4) than on middleshelf (27.1 and 23.8) and outer-shelf reefs (26.4 and 22.4). The rate of nitrogen fixation was positively correlated with the proportion of bare substratum and significantly higher concentrations of dissolved inorganic nitrogen were found in waters over the reefs than in water flowing onto those reefs. The abundance of algal-grazing fishes was reported previously to be significantly lower on inner-shelf reefs. It is suggested that this cross-shelf variation in the activity of algal-grazing fishes may be a determinant of the observed cross-shelf variations in potential nitrogen fixation.Contribution No. 233 from the Australian Institute of Marine Science     

The relationship between population genetic structure and pelagic larval duration in coral reef fishes on the Great Barrier Reef

Pelagic larval duration (PLD) is a commonly used proxy for dispersal potential in coral reef fishes. Here we examine the relationship between PLD, genetic structure and genetic variability in geographically widespread and ecological generalist species from one coral reef fish family (Pomacentridae) that differs in mean larval duration by more than a month. The genetic structure was estimated in eight species using a mitochondrial molecular marker (D-loop) and in a sub-set of five species using nuclear molecular markers (ISSRs). Estimates of genetic differentiation were similar among species with pelagic larvae, but differed between molecular markers. The mtDNA indicated no structure in all species except one, while the ISSR indicated some structure between the sampling locations in all species. We detected a relationship between PLD and genetic structure using both markers. These relationships, however, were caused by a single species, Acanthochromis polyacanthus, which differs from all the other species examined here in lacking a larval phase. With this species excluded, there was no relationship between PLD and genetic structure using either marker despite a range of PLDs of more than 20 days. Genetic diversities were generally high in all species and did not differ significantly among species and locations. Nucleotide diversity and total heterozygosity were negatively related to maximum PLD but again these relationships were caused by A. polyacanthus and disappeared when this species was excluded. These genetic patterns are consistent with moderate gene flow among well-connected locations and indicate that at this phylogenetic level (i.e., within family) the duration of the pelagic larval phase is unrelated to the patterns of genetic differentiation.     

Vertical and horizontal distribution of fish larvae near coral reefs at Lizard Island,Great Barrier Reef

Consistent patterns of horizontal distribution of fish larvae from plankton tows were found in shallow waters around Lizard Island, Great Barrier Reef during 1979 and 1980. Few types of larvae were most abundant in Lizard Lagoon, and none of these were old larvae. Forty percent of the 57 types of larvae studied differed in abundance between windward and downwind sides of the island. More types of old larvae were found in greatest abundance off the windward side of the island than the downwind side. Most types of larvae preferred deeper water (>3 m) during the day and moved upward at night, although a few types preferred upper (<3 m) or middle portions of the water column. These latter were more likely to descend at night or to maintain their day-time distribution than to move upward. Windward larvae [those more abundant off the windward (SE) side of the island] were more shallow-living than were downwind larvae, and were more likely to maintain their day-time distribution at night. The current patterns around Lizard Island were favourable for retention of larvae in both Lizard Lagoon and off the windward side of the island, if combined with certain vertical distributions of the larvae. However, while there was evidence for retention on the windward side of the island, there was no evidence for retention in Lizard Lagoon. Currents on the downwind side of the island were not favourable for retention of larvae and there was little evidence that larvae were retained there. Retention may be an accidental result of interaction between currents and larval behaviour, or the result of a strategy of retention by the larvae. These could not be distinguished in the present study.     

Elevated temperature and light enhance progression and spread of black band disease on staghorn corals of the Great Barrier Reef

Rates of progression and transmission of black band disease (BBD) on the staghorn coral, Acropora muricata, were compared between months for seasonal in situ studies and between temperature treatments in experimental aquaria manipulations at Lizard Island on the Great Barrier Reef (GBR). In situ field experiments demonstrated that BBD progressed along branches approximately twice as fast (1.7–2.4 times) during the austral summer month of January (0.99 ± 0.04 cm/day) than in the cooler months of July (0.58 ± 0.04 cm/day) and May (0.41 ± 0.07 cm/day). Transmission of BBD between colonies was also accelerated in warmer months, with signs of infection becoming visible 1.2 days earlier in January compared to May. The greater seawater temperatures by ∼2 to 3°C and light intensities by up to 650 μE/m²/s in January, suggest that rates of progression and transmission of BBD are linked to one or both of these parameters. Manipulative experiments in summer provide corroborative evidence that elevated temperatures increase rates of BBD progression, with the disease progressing 1.3 times more rapidly in the 32°C elevated temperature treatment than in the 30°C ambient treatment (1.17 ± 0.06 cm/day versus 0.92 ± 0.07 cm/day; F _2,6 = 7.66, P = 0.022). In contrast, although a trend for greatest BBD progression was measured in elevated temperature treatments of 29°C (0.46 ± 0.07 cm/day) and 31°C (0.52 ± 0.06 cm/day) in winter, these rates did not differ significantly (F _3,7 = 1.72, P = 0.249) from those measured for the ambient 27°C treatment (0.37 ± 0.06 cm/day) or the field controls (0.41 ± 0.09 cm/day). The lower rates of BBD progression in the 31°C winter treatment (0.52 ± 0.06 cm/day) than in the 30°C (0.92 ± 0.07 cm/day) summer treatment, may have been a response to 28-fold decreased light irradiance in the former, suggesting that high irradiance in combination with elevated temperatures may promote progression of BBD. Results from this study indicate that the impact of elevated temperature on BBD progression is complex with a combination of environmental factors including temperature and light playing key roles in progression and transmission of the disease.     

Long-term changes in coral colony size distributions on Kenyan reefs under different management regimes and across the 1998 bleaching event

Colony size is an important life-history characteristic of corals and changes in colony size will have significant effects on coral populations. This study summarizes ∼21,000 haphazard colony size measurements of 26 common coral taxa (mostly coral genera) collected annually between 1992 and 2006 in seven Kenyan reef lagoons. There was a major coral bleaching and mortality event in early 1998 and all seven reefs were affected. The seven locations include two long-protected Marine National Parks (Malindi and Watamu), one relatively recently established park (Mombasa), and four unprotected locations (Vipingo, Kanamai, Ras Iwatine, and Diani). They span about 150 km and represent three distinct fishery management regimes: old protected (OP), newly protected (NP), and unprotected (UP). Seventeen taxa had statistically significant different sizes for comparisons of the management regimes, with only one genus, Pavona, having larger sizes in the unprotected reefs. The size of eight coral genera showed a significant time and management interaction, and size frequency differences that existed in management areas prior to 1998 were further increased after the bleaching event. Time alone was a significant factor for eleven genera, and in all cases colonies were smaller after 1998. For most taxa, colony size distributions were significantly skewed and had right-tailed distributions. After 1998, the right-tailed distributions of Acropora, Hydnophora, and Montipora were significantly reduced. Most taxa had peaky distributions and only Acropora experienced a statistically significant change from peaky to flat. The mean sizes of taxa were not related to their mortality across 1998, which indicates that the size effect was within rather than between taxa. Astreopora and Platygyra were well-sampled taxa that did not show an effect of management, but had reduced median sizes across 1998. Consequently, no taxa were tolerant of both fishing and bleaching disturbances and the combined effect was to reduce the size of all corals.     

Coral-spawn slicks in the Great Barrier Reef: preliminary observations

Aerial surveys and surface samples in the spring of 1985, showed that slicks of coral eggs and embryos (coral spawn) formed in large numbers within and between reefs in the Central Great Barrier Reef Region. Coral-spawn slicks appeared on the days immediately following the annual mass multispecific spawning of reef corals. They were white or pink in colour, and were often highly elongate in form extending up to 5 km in length, and 10 m in width. Over 99% of each slick sampled during the surveys consisted of dead eggs, embryos and their breakdown products, which formed dense, highly viscous patches readily recognizable during aerial surveys. Despite the low proportion of live material, the slicks contained high concentrations of live embryos (15 to 230 per litre) which were over two orders of magnitude greater than concentrations in adjacent water masses. The distinctive colour, shape and texture of the coral-spawn slicks generally distinguished them from slicks formed by blooms of the blue-green alga Oscillatoria erythraea, which also occur commonly in the region. Many of the slicks were closely associated with surface oceanographic features, such as fronts between water parcels, and wakes and eddies behind reefs. Although more detailed sampling and surveys are required, these results suggest that it may be possible to track the movements of coral embryos and larvae directly for the first one or two days following mass spawning, and indirectly thereafter by monitoring other surface features.     

Variation in emergence of parasitic and predatory isopods among habitats at Lizard Island, Great Barrier Reef

Gnathiid isopods are one of the most abundant groups of ectoparasites on coral reef fishes. They, and other isopods, have been shown to significantly affect the health and behaviour of many reef fish. Whether isopod emergence differs among habitats on coral reefs is not known. In this study, we measured emergence rates of parasitic isopods (Gnathiidea and Flabellifera) in six habitats at two sites at Lizard Island during new moon periods in March and December 2004. Isopods were collected from the periphery and centres of micro-reefs, patch reefs, continuous reefs, and from inter-reefal habitats (sand or rubble) with 1 m² emergence traps. Sites (Casuarina and Coconut Beach) were located on opposite sides of Lizard Island. Live gnathiids were collected with light traps in November 2005 to investigate species differences between sites. At both sites, the most abundant gnathiid species was exclusive to that site. More gnathiid larvae emerged at night, and emergence of fed gnathiids (pranizae) and flabelliferan isopods was almost exclusively nocturnal. Diurnal emergence was greater at Coconut Beach than Casuarina Beach. Although emergence counts were not consistently affected by parameters such as habitat, site, or sampling period, gnathiid size and feeding state were. Where significant differences existed, gnathiids were larger and more often fed over reef borders than centrally. We suggest first stage larvae (Z1) have the largest influence on total abundance and are patchily distributed in accordance with adults from which they have recently hatched. As later stage larvae depend on fish, more successful (fed) and older larvae are found on the edges of reefs where appropriate hosts may be more abundant, or predation is lower. Gnathiids were over-dispersed in all habitats investigated, including apparently homogeneous beds of coral rubble and sand. This indicates that their distributions may be better predicted by very fine scale differences in substrate or that aggregations are the result of gregariousness and may be difficult to predict on the basis of substrate. Emergence traps collected comparatively few parasitic flabelliferan isopods. This community differed greatly from the previously described community of scavenging isopods at Lizard Island. These differences are probably the result of differences in trapping methodology.     

Porites and the Phoenix effect: unprecedented recovery after a mass coral bleaching event at Rangiroa Atoll,French Polynesia

The 1997/1998 El Niño Southern Oscillation (ENSO) was the most severe coral bleaching event in recent history, resulting in the loss of 16 % of the world’s coral reefs. Mortality was particularly severe in French Polynesia, where unprecedented mortality of massive Porites was observed in lagoonal sites of Rangiroa Atoll. To assess the recovery of massive Porites 15 years later, we resurveyed the size structure and extent of partial mortality of massive Porites at Tivaru (Rangiroa). Surveys revealed an abundance of massive Porites colonies rising from the shallow lagoonal floor. Colony width averaged 2.65 m, reaching a maximum of 7.1 m (estimated age of ~391 ± 107 years old). The relative cover of recently dead skeleton within quadrats declined from 42.8 % in 1998 to zero in 2013, yet the relative cover of old dead skeleton increased only marginally from 22.1 % in 1998 to 26.1 % in 2013. At a colony level, the proportion of Porites dominated by living tissue increased from 34.9 % in 1998 to 73.9 % in 2013, indicating rapid recovery of recent dead skeleton to living tissue rather than transitioning to old dead skeleton. Such rapid post-bleaching recovery is unprecedented in massive Porites and resulted from remarkable self-regeneration termed the ‘Phoenix effect’, whereby remnant cryptic patches of tissue that survived the 1997/1998 ENSO event regenerated and rapidly overgrew adjacent dead skeleton. Contrary to our earlier predictions, not only are large massive Porites relatively resistant to stress, they appear to have a remarkable capacity for recovery even after severe partial mortality.     

Effect of nutrient enrichment on the complementary (secondary) metabolite composition of the soft coral Sarcophyton ehrenbergi (Cnidaria: Octocorallia: Alcyonaceae) of the Great Barrier Reef

 A long-term study of the effects of nutrient enrichment on coral reefs (ENCORE Experiment) was carried out at One Tree Island (23°30′S; 152°96′E), Great Barrier Reef, between 1992 and 1996. The experiment involved the addition of water-soluble nutrients to 12 microatolls which contained a range of organisms and were situated within the larger lagoon. Three replicates of each of three nutrient treatments (nitrogen, phosphorus, nitrogen plus phosphorus) and an untreated set of three control atolls were prepared using the 12 selected microatolls. As part of the larger ENCORE experiment, changes in the chemical composition of the alcyonacean soft coral Sarcophyton ehrenbergi Marenzeller (Octocorallia: Alcyonacea), placed in the treatment microatolls, were monitored for a 1 yr period in an attempt to detect any responses attributable to nutrient enrichment. Multivariate analyses were performed to determine whether there were any patterns of response in the different nutrient treatments. At the level of individual metabolites, there were no clear treatment effects. However, the ratio of bioactive or stress metabolites (terpenes) to energy storage metabolites (lipids), referred to as the “physiological-change indicator”, revealed effects of nutrient enrichment. Nitrogen enrichment resulted in a trend towards higher physiological-change indicators than control or phosphorus treatments in the majority of cases, while phosphorus enrichment significantly decreased the ratio relative to controls. In most cases, the physiological-change indicator increased in soft soft corals relocated into contact with the scleractinian Pocillopora damicornis. The potential of soft corals to serve as indicators of a changed nutrient regime is discussed. Received: 23 November 1998 / Accepted: 23 September 1999     

Significance of pelagic bacteria as a trophic resource in a coral reef lagoon,One Tree Island,Great Barrier Reef

Bacterial numbers and frequency of dividing cells (FDC) were estimated in surface waters at seven stations along a transeet across One Tree lagoon and reefs at 2 h intervals over one tidal cycle in May 1984 and once a day on 8 d in December 1984/January 1985. Cell numbers ranged between 1.24 and 13.10x10⁵ ml^-1, with an overall mean value of 4.81x10⁵. There was a progressive depletion in standing stock from windward to leeward stations across the lagoon, also reflected in the FDC, which generally showed similar dynamic patterns to cell numbers throughout the study. Predator-free seawater (filtered through 2 m pore-size filters) and mucus-enriched incubations were also used to establish the relationship between the growth rate () and FDC for coral-reef populations. Average growth rates predicted from FDC values ranged from 0.062 to 0.174 h^-1, which is equivalent to doubling times of 5.74 to 16.00 h, with an overall mean value of 11.5 h. These fast doubling times suggest that bacteria respond rapidly to pulses of enrichment as they float over the lagoon and reefs, characteristically achieving about one doubling per tidal cycle. This probably ensures that the bulk of labile organic matter and dissolved nutrients is conserved within the immediate coral-reef environment. Estimates of bacterial production also suggest that they may contribute up to 40% of total picoplankton production and about 25% of total microplankton production. Pelagic bacteria are therefore potentially a major food resource for benthic filter-feeders, especially for those mainly dependent on the smaller (pico) components of the plankton.     

Conservation Objectives and Sea‐Surface Temperature Anomalies in the Great Barrier Reef

Abstract: Spatial and temporal dynamics of ecological processes have long been considered important in marine systems, but seldom have conservation objectives been set for them. Climate change makes the consideration of the dynamics of ecological processes in the design of marine protected areas critical. We analyzed sea‐surface temperature (SST) trends and variability in Great Barrier Reef Marine Park (GBRMP) for 25 years and formulated and tested whether three sets of notional conservation objectives were met to illustrate the potential for planning to address climate change. Given mixed and limited evidence that no‐take areas increase resilience to disturbances such as anomalously high temperatures (i.e., temperatures ≥1 °C above weekly mean temperature), our conservation objectives focused on areas less likely to be affected by such events at extents ranging from the entire Great Barrier Reef to the system of no‐take zones and individual no‐take zones. The objective sets were (1) at least 50% of temperature refugia (i.e., pixels that had high‐temperature anomalies <5% or <7% of the time) within no‐take zones, (2) maximum occurrence of high‐temperature anomalies is <10%,< 20%, or <30% of total no‐take area 90% of the time, and (3) coverage of any single no‐take zone by high‐temperature anomalies occurs <5% or <10% of the time. We used satellite imagery from 1985–2009 to measure SST to determine high‐temperature anomalies. SSTs in the Great Barrier Reef increased significantly in some regions, and some of the conservation objectives were met by the park's current zoning plan. Dialogue between conservation scientists and managers is needed to develop appropriate conservation objectives under climate change and strategies to meet them.     

Zooplankton community structure and water flow in the lee of Helix Reef (Great Barrier Reef, Australia)

To investigate which physical processes contribute most in moulding zooplankton community structure in the waters close to coral reefs, light traps moored in a grid pattern were used to collect zooplankton from the sea surface at 16 stations on the downstream side of Helix Reef during three time periods (2100-2200, 2400-0100, and 0300-0400 hours) over three consecutive nights covering the new moon period in January 1992. Two distinct zooplankton communities were present: a community composed primarily of reef-resident, demersal plankton immediately to the south of the reef in an area of reduced flushing, and a community containing coastal and shelf-seas taxa at the more exposed sites in the open flow field. The fauna composition at a number of exposed stations was as rich as that at sheltered stations both in terms of number of taxa and diversity indices but was almost an order of magnitude less abundant. The reef-resident, demersal plankton community was dominated by gammarid amphipods, mysids, and polychaetes, whereas only transient, meroplanktonic forms such as echinoderm and echinopluteus larvae and shelf-seas, holoplanktonic forms such as doliolids and larvaceans were significantly more abundant in the exposed community. Zooplankton associations were apparently formed by a combination of hydrodynamic processes, spatial and temporal distribution patterns of individual taxa, specific behaviours of certain taxa, and the interactions among taxa at different trophic levels.     

Vertical distribution of fish larvae in the Great Barrier Reef Lagoon,Australia

To investigate the natural defenses of Antarctic marine organisms against exposure to ultraviolet (UV) radiation (280 to 320 nm), 57 species (1 fish, 48 invertebrates, and 8 algae) were collected during austral spring 1988 in the vicinity of Palmer Station (Anvers Island, Antarctic Peninsula) and were analyzed for the presence of mycosporine-like amino acids (MAAs), compounds that absorb UV radiation and may provide shielding from these biologically hazardous wavelengths. Nearly 90% of the 57 species examined contained MAAs, and eight specific MAA compounds were identified. Seven of these (palythine, porphyra-334, shinorine, mycosporineglycine, palythene, asterina-330, and palythinol) have been observed previously in marine organisms from temperate and tropical latitudes. A new MAA, mycosporineglycine: valine, was found in the Antarctic fish and in 38 of the invertebrate species examined. This study confirms widespread occurrence of MAAs in Antarctic marine organisms and suggests that these species have some degree of natural biochemical protection from UV exposure.Contribution No. 502 from the Australian Institute of Marine Science     

Cross-shelf distribution of copepods and fish larvae across the central Great Barrier Reef

The distribution of total dry weight of zooplankton, copepod numbers and ichthyoplankton across the outer continental shelf in the central Great Barrier Reef was examined at bi-weekly intervals for three months over summer of 1983. Copepods were sampled (236 m net) within 10 m of the surface and within 10 m of the bottom. Mean densities in surface waters decreased markedly from the mid-shelf to outer shelf and the Coral Sea, but no cross-shelf gradient occurred in the bottom-water. Densities of copepods on the mid-shelf (surface and bottom waters) and in bottom-waters of the outer shelf were typically ca. 400 m^–3. Significantly lower densities (ca. 100 m^–3) occurred in surface waters of the outer shelf, except during outbursts of Acartia australis, when densities in these waters differed little from those elsewhere on the shelf. In oceanic waters, 10 km from the outer shelf station, copepod densities in surface waters were ca. 40 m^–3. Four of the five most abundant copepod taxa in surface waters, Paracalanus spp., Eucalanus crassus, Acrocalanus gracilis and Canthocalanus pauper, tended to be most abundant at the mid-shelf end of the transect. Acartia australis was sporadically very abundant in surface waters of the outer shelf, as was Paracalanus spp. in bottom-water of the outer shelf. An assemblage of Coral Sea species of copepod occurred in bottom-water of the outer shelf during two major intrusions, but not at other times. Densities of all common species varied considerably between cruises. Maximum densities of all common species except A. australis tended to be associated with diatom blooms linked to intrusions but a bloom did not necessarily mean all common species were abundant. Fish larvae included both reef and non-reef taxa, with reef taxa predominating on the outer shelf (approx 2:1 in density of individuals) and non-reef taxa dominating in nearshore samples (approx 2:1). Nine of the ten most abundant taxa analysed showed highly significant variation in numbers among stations and all but one of these also exhibited significant station x cruise interactions. Interactions generally reflected changes in the rank importance of adjacent stations from one cruise to the next or lack of any significant cross-shelf variation on some cruises where overall abundance of the taxa was low.     

High genetic variability in a population of Tridacna maxima from the Great Barrier Reef

A population of the bivalve mollusk Tridacna maxima (Röding) from Hron Island, Great Barrier Reef, Australia, was studied by gel electrophoresis, and proved to be highly variable genetically, with an average heterozygosity of about 22%. This compares closely with a population of T. maxima from Enewetak (Eniwetok) Atoll, with an average heterozygosity of about 20%, very high for marine organisms. Enewetak Atoll was the site of a series of nuclear tests. The Heron Island study verifies that the high variability is natural, and supports the hypothesis that species from trophically stable environments tend to be highly variable genetically.     

Large-scale spatial variation in epilithic algal matrix cryptofaunal assemblages on the Great Barrier Reef

Spatial variation in the epilithic algal matrix (EAM) cryptofauna was investigated at three locations on the Great Barrier Reef: two inner shelf—Orpheus Island and the Turtle Island group—and a mid-shelf location, Lizard Island. Although the EAM appears to be a relatively simple and consistent habitat, significant differences in cryptofaunal assemblages were found between locations. EAM assemblages from Orpheus Island were markedly different. This appears to be a function of the sediment profile characteristics (grain size >60 µm) at Orpheus Island, as many cryptofaunal taxa displayed positive relationships with sediment volume. However, sediment volumes did not differ significantly between the three locations, highlighting the possibility of cyclonic activity affecting the sediment profile at Orpheus Island in the months preceding the study, in addition to the nutrient input from major terrigenous sources. The results of this study show that EAM cryptofaunal assemblages are not uniform across the Great Barrier Reef and suggest that dissolved nutrients, sediment loads and distance from river systems may be significant drivers of cryptobenthic faunal compositions.