The condition of coral reefs in South Florida (2000) using coral disease and bleaching as indicators

The destruction of coral reef habitats has occurred at unprecedented levels during the last three decades. Coral disease and bleaching in the Caribbean and South Florida have caused extensive coral mortality with limited recovery, often coral reefs are being replaced with turf algae. Acroporids were once dominant corals and have diminished to the state where they are being considered as endangered species. Our survey assessed the condition of reef corals throughout South Florida. A probability-based design produced unbiased estimates of the spatial extent of ecological condition, measured as the absence or presence and frequency or prevalence of coral diseases and bleaching intensity over large geographic regions. This approach allowed us to calculate a quantifiable level of uncertainty. Coral condition was estimated for 4100 hectares (ha) (or 41.0 km²) of coral reefs in South Florida, including reefs in the Florida Keys National Marine Sanctuary (FKNMS), New Grounds, Dry Tortugas National Park (DTNP), and Biscayne National Park (BNP). The absence or presence of coral disease, causal coral bleaching, partial bleaching and coral paling were not good indicators of overall coral condition. It was more useful to report the prevalence of anomalies that indicated a compromised condition at both the population and community levels. For example, 79% of the area in South Florida had less than 6% of the coral colonies diseased, whereas only 2.2% (97.15 ha) of the sampled area had a maximum prevalence of 13% diseased coral colonies at any single location. The usefulness of causal bleaching might be more important when considering the prevalence of each of the three different states at a single location. For example, paling was observed over the entire area, whereas bleaching and partial bleaching occurred at 19 and 41% of the area, respectively. An index for coral reef condition might integrate the prevalence and species affected by each bleaching state at individual locations. By establishing these baselines, future surveys can examine changes and trends in the spatial distribution of coral conditions in South Florida and able to score the reefs as to their health status.     

10th Anniversary Review: a changing climate for coral reefs

Tropical coral reefs are charismatic ecosystems that house a significant proportion of the world's marine biodiversity. Their valuable goods and services are fundamental to the livelihood of large coastal populations in the tropics. The health of many of the world's coral reefs, and the goods and services they provide, have already been severely compromised, largely due to over-exploitation by a range of human activities. These local-scale impacts, with the appropriate government instruments, support and management actions, can potentially be controlled and even ameliorated. Unfortunately, other human actions (largely in countries outside of the tropics), by changing global climate, have added additional global-scale threats to the continued survival of present-day coral reefs. Moderate warming of the tropical oceans has already resulted in an increase in mass coral bleaching events, affecting nearly all of the world's coral reef regions. The frequency of these events will only increase as global temperatures continue to rise. Weakening of coral reef structures will be a more insidious effect of changing ocean chemistry, as the oceans absorb part of the excess atmospheric carbon dioxide. More intense tropical cyclones, changed atmospheric and ocean circulation patterns will all affect coral reef ecosystems and the many associated plants and animals. Coral reefs will not disappear but their appearance, structure and community make-up will radically change. Drastic greenhouse gas mitigation strategies are necessary to prevent the full consequences of human activities causing such alterations to coral reef ecosystems.     

Assessing the ecological effects of human impacts on coral reefs in Bocas del Toro,Panama

Environmental and biological reef monitoring was conducted in Almirante Bay (Bahía Almirante) in Bocas del Toro, Panama, to assess impacts from anthropogenic developments. An integrated monitoring investigated how seasonal temperature stress, turbidity, eutrophication and physical impacts threatened reef health and biodiversity throughout the region. Environmental parameters such as total suspended solids [TSS], carbon isotopes (δ¹³C), C/N ratios, chlorophyll a, irradiance, secchi depth, size fractions of the sediments and isotope composition of dissolved inorganic carbon [DIC] of the water were measured throughout the years 2010 and 2011 and were analysed in order to identify different impact sources. Compared to data from Collin et al. (Smithsonian Contributions to the Marine Sciences 38:324–334, 2009) chlorophyll a has doubled at sites close to the city and the port Almirante (from 0.46–0.49 to 0.78–0.97 μg l^?1) and suspension load increased, visible by a decrease in secchi depth values. Visibility decreased from 9-13 m down to 4 m at the bay inlet Boca del Drago, which is strongly exposed to river run off and dredging for the shipping traffic. Eutrophication and turbidity levels seemed to be the determining factor for the loss of hard coral diversity, most significant at chlorophyll a levels higher than 0.5 μg l^?1 and TSS levels higher than 4.7 mg l^?1. Hard coral cover within the bay has also declined, at some sites down to <10 % with extremely low diversities (7 hard coral species). The hard coral species Porites furcata dominated the reefs in highly impacted areas and showed a strong recovery after bleaching and a higher tolerance to turbidity and eutrophication compared to other hard coral species in the bay. Serious overfishing was detected in the region by a lack of adult and carnivorous fish species, such as grunts, snappers and groupers. Study sites less impacted by anthropogenic activities and/or those with local protection showed a higher hard coral cover and fish abundance; however, an overall loss of hard coral diversity was observed.     

Methods to estimate solar radiation dosimetry in coral reefs using remote sensed, modeled, and in situ data

Solar irradiance has been increasingly recognized as an important determinant of bleaching in coral reefs, but measurements of solar radiation exposure within coral reefs have been relatively limited. Solar radiation dosimetry within multiple coral reef areas of South Florida was assessed using remote sensed, modeled, and measured values during a minor bleaching event during August 2005. Coral reefs in the Dry Tortugas and Upper Keys had similar diffuse downwelling attenuation coefficients (Kd, m(-1)), whereas Kd values were significantly greater in the Middle and Lower Keys. Mean 1% attenuation depths varied by reef region for ultraviolet B (UVB; 9.7 to 20 m), ultraviolet A (UVA; 22 to 40 m) and visible (27 to 43 m) solar radiation. Solar irradiances determined from remote sensed data were significantly correlated with measured values, but were generally overestimated at the depth of corals. Solar irradiances modeled using an atmospheric radiative transfer model parameterized with site specific approximations of cloud cover showed close agreement with measured values. Estimated daily doses (W h/m(2)) of UVB (0.01-19), UVA (2-360) and visible (29-1,653) solar radiation varied with coral depth (2 to 24 m) and meteorological conditions. These results indicate large variation in solar radiation dosimetry within coral reefs that may be estimated with reasonable accuracy using regional Kd measurements and radiative transfer modeling.     

Spatial and temporal variability of water quality in the coral reefs of Tayrona National Natural Park,Colombian Caribbean

Tayrona National Natural Park (TNNP) is a hotspot of coral reef biodiversity in the Colombian Caribbean, located between the city of Santa Marta (>455,000 inhabitants) and several smaller river mouths (Rio Piedras, Mendihuaca, Guachaca). The region also experiences a strong seasonal variation in physical parameters (temperature, salinity, wind, and water currents) due to alternating dry seasons with coastal upwelling and rainy seasons. However, the spatial and temporal effects on water quality parameters relevant for coral reef functioning have not been investigated. Therefore, inorganic nutrient, chlorophyll a, and particulate organic carbon (POC) concentrations along with biological O₂ demand (BOD), pH, and water clarity directly above local coral reefs (~10 m water depth) were monitored for 25 months in four bays along a distance gradient (12–20 km) to Santa Marta in the southwest and to the first river mouth (17–27 km) in the east. This is by far the most comprehensive coral reefs water quality dataset for the region. Findings revealed that particularly during non-upwelling, chlorophyll a and POC concentrations along with BOD significantly increased with decreasing distance to the rivers in the east, suggesting that the observed spatial water quality decline was triggered by riverine runoff and not by the countercurrent-located Santa Marta. Nitrate, nitrite, and chlorophyll a concentrations significantly increased during upwelling, while pH and water clarity decreased. Generally, water quality in TNNP was close to oligotrophic conditions adequate for coral reef growth during non-upwelling, but exceeded critical threshold values during upwelling and in relation to riverine discharge.     

采样时间对ANDERSEN采样器采样效果的影响

在室内用ANDERSEN生物粒子采样器进行了不同采样时间对采集空气细菌和真菌粒子浓度,粒数中值直径效果的研究,结果表明,在1－12min内,采集的空气细菌和真菌粒子浓度随采样时间的增加而减少,呈明显的负相关关系,相关系数分别为－0．903和－0．688,P值均大于0．05,另外,在采样过程中,空气真菌比细菌耐受采样空气冲击力的能力强,采样时间对空气细菌和真菌粒子的粒度分布和粒数中值直径的影响不明显。     

Critical technical elements of state bioassessment programs: a process to evaluate program rigor and comparability

We developed a systematic process to evaluate state/tribal bioassessment programs to provide information about the rigor of the technical approach. This is accomplished via on-site interviews to produce an evaluation that assigns one of four levels of rigor as an outcome. Level 4 is the most rigorous and reflects a technical capacity to accurately determine incremental condition and support management programs. The remaining three levels are less able to assess incremental condition and are appropriate for only some management support needs. Accurately determining impairment and diagnosing pollution-specific stressors are fundamental tasks that states/tribes must accomplish to provide management support. This goal is fulfilled to varying degrees by most states/tribes. The evaluation employs a checklist and a sliding scale of rigor for 13 technical elements. Feedback is provided to each state/tribe via a technical memorandum that describes the technical components of the monitoring program, highlights strengths, and recommends improvements for specific technical issues. This can be used to refine the bioassessment and monitoring programs to better support management programs. The results of 14 state/tribal evaluations are included here. The majority (nine states, one tribe) revealed that most operate at level 2 with developmental activities that will elevate the level of program rigor already underway. Two states operate level 4 programs and each have numeric biocriteria and refined designated uses in their water quality standards. This is the ultimate goal of the process of engaging states in the development of bioassessment programs in the U.S.     

Biological community structure on patch reefs in Biscayne National Park, FL, USA

Coral reef ecosystem management benefits from continual quantitative assessment of the resources being managed, plus assessment of factors that affect distribution patterns of organisms in the ecosystem. In this study, we investigate the relationships among physical, benthic, and fish variables in an effort to help explain the distribution patterns of organisms on patch reefs within Biscayne National Park, FL, USA. We visited a total of 196 randomly selected sampling stations on 12 shallow (<10 m) patch reefs and measured physical variables (e.g., substratum rugosity, substratum type) and benthic and fish community variables. We also incorporated data on substratum rugosity collected remotely via airborne laser surveying (Experimental Advanced Airborne Research Lidar—EAARL). Across all stations, only weak relationships were found between physical, benthic cover, and fish assemblage variables. Much of the variance was attributable to a “reef effect,” meaning that community structure and organism abundances were more variable at stations among reefs than within reefs. However, when the reef effect was accounted for and removed statistically, patterns were detected. Within reefs, juvenile scarids were most abundant at stations with high coverage of the fleshy macroalgae Dictyota spp., and the calcified alga Halimeda tuna was most abundant at stations with low EAARL rugosity. Explanations for the overwhelming importance of “reef” in explaining variance in our dataset could include the stochastic arrangement of organisms on patch reefs related to variable larval recruitment in space and time and/or strong historical effects due to patchy disturbances (e.g., hurricanes, fishing), as well as legacy effects of prior residents (“priority” effects).     

Sampling to differentiate between pulse and press perturbations

There is great inconsistency in the use of the terms pulse and press when describing types of perturbations. This is due primarily to a failure to distinguish between the cause and the effect of the perturbation in question. The cause and effect may be either short- or long-term and clearly one may be short-term and the other long-term. Distinction between these two types of disturbance is crucial for management to prevent further impact. Thus, it is important to describe separately these two aspects of a perturbation. Here, we define a protocol for sampling perturbations which enables the cause and effect to be distinguished between short- or long-term. Existing (i.e., already established) assemblages and newly-established assemblages are sampled and compared among disturbed and control locations. Existing assemblages may have been affected by past (pulse) disturbances and/or ongoing (press) disturbances, whereas the establishment of new assemblages can only be influenced by ongoing disturbances. We describe the procedures for assessing impacts of estuarine marinas as an illustration of the issues to be considered in any habitat. Settlement plates and defaunated sediment are suggested for sampling the establishment of new assemblages in aquatic environments.     

石河子市绿化适生树种的防尘作用研究

通过对石河子市适生树种的滞尘能力分析,得到绿化对该市主要污染物（TSP）的影响作用效果。     

富集采样法监测空气和废气样品时采样体积的确定方法

讨论了富集采样法监测空气和废气样品时确定采样体积的主要因素,给出了富集采样法监测空气和废气样品时采样体积的确定方法和实例。     

Influence of Meteorological Parameters on Particulates and Atmospheric Pollutants at Taichung Harbor Sampling Site

Atmospheric aerosol particles and metallic concentrations, ionic species were monitored at the Experimental harbor of Taichung sampling site in this study. This work attempted to characterize metallic elements and ionic species associated with meteorological conditions variation on atmospheric particulate matter in TSP, PM_2.5, PM_2.5–10. The concentration distribution trend between TSP, PM_2.5, PM_2.5–10 particle concentration at the TH (Taichung harbor) sampling site were also displayed in this study. Besides, the meteorological conditions variation of metallic elements (Fe, Mg, Cr, Cu, Zn, Mn and Pb) and ions species (Cl⁻, NO₃ ⁻, SO₄ ²⁻, NH₄ ⁺, Mg²⁺, Ca²⁺ and Na⁺) concentrations attached with those particulate were also analyzed in this study. On non-parametric (Spearman) correlation analysis, the results indicated that the meteorological conditions have high correlation at largest particulate concentrations for TSP at TH sampling site in this study. In addition, the temperature and relative humidity of meteorological conditions that played a key role to affect particulate matter (PM) and have higher correlations then other meteorological conditions such as wind speed and atmospheric pressure. The parameter temperature and relative humidity also have high correlations with atmospheric pollutants compared with those of the other meteorological variables (wind speed, atmospheric pressure and prevalent wind direction). In addition, relative statistical equations between pollutants and meteorological variables were also characterized in this study.     

废水污染物总量监测中采样方法的研究

通过对21家有代表性的废水污染源进行现场采样、排放曲线分析、采样频率优化的研究,确定总量监测中采样频率优化结果,为污染源总量控制监测提供技术指导。     

Influence of Riffle and Snag Habitat Specific Sampling on Stream Macroinvertebrate Assemblage Measures in Bioassessment

Stream macroinvertebrate communities vary naturally among types of habitats where they are sampled, which affects the results of environmental assessment. We analyzed macroinvertebrates collected from riffle and snag habitats to evaluate influences of habitat-specific sampling on taxon occurrence, assemblage measures, and biotic indices. We found considerably more macroinvertebrate taxa unique to snags (143 taxa) than to riffles (75 taxa), and the numbers of taxa found in both riffles and snags (149 taxa) were similar to that found in snags. About 64% of the 47 macroinvertebrate measures we tested differed significantly between riffles and snags. Eighty percent intercepts of regressions between biotic indices and urban or agricultural land uses differed significantly between riffles and snags. The Hilsenhoff biotic index calculated from snag samples explained 69% of the variance of riffle samples and classified 66% of the sites into the same stream health group as the riffle samples. However, four multimetric indices for snag samples explained less than 50% of the variance of riffle samples and classified less than 50% of the sites into the same health group as the riffle samples. We concluded that macroinvertebrate indices developed for riffle/run habitat should not be used for snag samples to assess stream impairment. We recommend developing an index of biotic integrity specifically for snags and using snags as an alternate sampling substrate for streams that naturally lack riffles.     

Sampling and Analysis of Organic Compounds in Diesel Particulate Matter

The fraction of atmospheric semi-volatile organic compounds (SVOC) is partitioned between the gaseous and particulate phases. Certain of these compounds eg. polynuclear aromatic hydrocarbons (PAH) and their derivatives have been shown to exhibit mutagenic or carcinogenic properties. Emissions from diesel engines are an important source of these contaminants. In a dilution chamber, we studied a diesel engine emissions. It is shown firstly, that the gaseous fraction is predominant (by up to 20 times) with respect to the particulate phase. Secondly, the polar compounds, neglected in the majority of previous studies, are the predominant species. A test campaign was carried out in Paris-Porte d'Auteuil which yielded similar results to the laboratory experiments.     

Effective Long-term Ecological Monitoring Using Spatially and Temporally Nested Sampling

Effective environmental management requires documentation of ecosystem status and changes to that status. Without long-term data, short-term natural variability can mask chronic and/or cumulative impacts, often until critical levels are reached. However, a trade-off generally occurs between sampling in space and time. This study analyses a spatially and temporally nested long-term (12 years) monitoring programme conducted on benthic macrofauna in a large harbour. Sampling was carried out at six sites for 5.5 years, after which only two sites were sampled for the next 5 years. After this period, all six sites were sampled for another 2 years. While ecology is frequently thought of being highly variable, this design was able to detect trends, and cycles, in abundance, with only around 10% of species at each site exhibiting unpredictable temporal variability. Sites exhibiting similar trends in the abundance of a species over the 12.5-year period were generally spatially contiguous, and the spatial scale of change could be assessed. Continuous sampling at two sites identified whether changes in unsampled sites were related to long-term cycles. Moreover, this sampling provided a long-term background of temporal fluctuations against which to assess the ecological significance of observed changes.     

Influence of Relative Humidity and Ozone on the Sampling of Volatile Organic Compounds on Carbotrap/Carbosieve Adsorbents

By using a dynamic dilution system, the atmospheric measurement of 11 selected toxics VOCs (ethylene, acetylene, propene, 1-butene, 1,3-butadiene, 1-pentene, 1-hexene, benzene, toluene, ethylbenzene, m+p-xylene) from the list WHO of 1996 and TO-14 method of US EPA by preconcentration by thermal desorption (TD), analysis by gas chromatography (GC), identification and quantification with a flame ionisation detector (FID) was developed and validated in term of metrology, especially the techniques of sampling of these VOCs with adsorbents cartridges "Air Toxics" when used with an "UMEG sampler" equipped in the inlet with a nafion membrane. In particular the influence of climatic conditions (temperature and relative humidity) and the influence of chemical factors like ozone, on the representativity of sampling were studied. Experiments made with various humidities showed that the addition of a nafion membrane in the inlet of the sampling system was required. Without this membrane, losses of compounds were observed for RH >50%. With this membrane, storage for 2 weeks in a refrigerator, as for canisters, did not induce a loss of compounds. No significative decrease of concentrations of the studied VOCs after 14 days storage, which are known to react with ozone, were observed with an ozone concentrations of 55 ppb. One explanation is that nafion membrane, placed in the inlet of the sampler, will neutralize ozone before entering the sampling tubes. This observation is in accordance with literature which states that the sampling of VOCs on Carbotrap cartridges without ozone scrubber induce a loss of compounds.     

Sampling Scale Effects in Random Fields and Implications for Environmental Monitoring

The concept of a sampling scale triplet of spacing, extent and support is used to define the spatial dimensions of a monitoring network or a field study. The spacing is the average distance between samples, the extent is the size of the domain sampled and the support is the averaging area of one sample. The aim of this paper is to examine what is the bias and the random error (uncertainty) introduced by the sampling scale triplet into estimates of the mean, the spatial variance and the integral scale of a variable in a landscape. The integral scale is a measure of the average distance over which a variable is correlated in space. A large number of two dimensional random fields are generated from which hypothetical samples, conforming to a certain sampling scale triplet, are drawn which in turn are used to estimate the sample mean, spatial variance and integral scale. The results indicate that the biases can be up to two orders of magnitude. The bias of the integral scale is positively related to the magnitude of any of the components of the scale triplet while the bias of the spatial variance is different for different components of the scale triplet. All sampling scale effects are relative to the underlying correlation length of the variable of interest which is closely related to the integral scale. The integral scale can hence be used for sampling design and data interpretation. Suggestions are given on how to adjust a monitoring network to the scales of the variables of interest and how to interpret sampling scale effects in environmental data.