Morphology and sinking velocities of fecal pellets of copepod, molluscan, euphausiid, and salp taxa in the northeastern tropical Atlantic

Morphological characteristics and sinking velocities of naturally occurring fecal pellets of copepods, euphausiids, salps, and pelagic mollusks collected in the northeastern tropical Atlantic were investigated during the period of May-June 1992. The fecal pellets of copepods and euphausiids were cylindrical and distinguished only by their size. Those of salps were, in general, rectangular, and slight differences were noted according to the species. The fecal pellets of the molluscan pteropod Clio sp. were conical, while those of the molluscan heteropod Carinaria sp. were spiral. The sinking velocities ranged from 26.5 to 159.5 m day^-1 for copepod fecal pellets, from 16.1 to 341.1 m day^-1 for euphausiid pellets, from 43.5 to 1167.6 m day^-1 for salps' pellets (Cyclosalpa affinis, Salpa fusiformis, Iasis zonaria, and two unidentified species), from 65 to 205.7 m day^-1 for Clio sp. pellets, and from 120.3 to 646.4 m day^-1 for Carinaria sp. fecal pellets. The measured sinking velocities were compared with estimates predicted using the equations of Komar et al. (1981; Limnol Oceanogr 26:172-180), Stokes' law, and Newton's second law, using either a constant density of fecal pellets (1.22 g cm^-3) or densities estimated with the three different equations. When a constant density was used, the three equations overestimated the sinking velocities; Stokes' law resulted in the largest overestimation, and Newton's second law, the smallest. At the taxa level, the overestimation was greatest for euphausiid 1 fecal pellets and smallest for copepod fecal pellets. When the three equations were used to estimate fecal pellet density, the density estimated using the equation of Komar et al. was the greatest, and that using Stokes' law, the smallest, resulting in over- and underestimation of sinking velocities, respectively. Newton's second law resulted in an intermediate density and gave the closest estimate of sinking velocities. We propose that measurement of sinking velocities of a portion of the fecal pellets might guide in choosing an appropriate equation to be used for a reasonable interpretation of vertical mass flux.     

Structural organisation,transfer and biological fate of endosymbiotic bacteria in gutless oligochaetes

From differences in size and structure, it appears there are two species of gram-negative bacteria in the gutless oligochaetes Phallodrilus leukodermatus and P. planus from Bermuda. A non-random, differentiated and consisten distribution pattern of the extracellular bacteria along the length of the worm's body underlines the regulated nature of the bacterial colonization. This emerges also from studies on the transfer of the bacteria between host generations: exceptional for oligochaetes, eggs are deposited singly in a sticky mucus sheath and not together in a cocoon. They become infected immediately at oviposition, apparently by intrusion from large stores of bacteria in a genital pad abutting the female pores. During ontogenesis, a balance is established between extracellular, active bacteria and intracellular lytic forms enclosed in vacuoles by the epidermal cells. In early developmental stages, lytic bacteria prevail, but older worms harbour mainly extracellular prokaryotes underneath their cuticle. The thick epidermis/cuticle complex is differentiated in regular zones with a progressive trend towards enclosing and digesting bacteria intracellularly in the deeper layers. These are the first results on the transfer and biological fate of endosymbiotic bacteria living in animals from sulfide biotopes.     

Origins and microenvironments of bacteria mediating fecal pellet decomposition in the sea

The fecal pellets of zooplankton are thought to be major carriers of organic matter from surface to deeper waters of the oceans. As the pellets descend, they release soluble components, partially due to breakdown by associated microorganisms. Previous laboratory work of other investigators has suggested that the surface of a fecal pellet rapidly acquires bacteria, which increase in abundance until they and their protozoan consumers disrupt the pellet membrane, spilling contents into the water. In contrast, our field collections of fecal pellets from free-floating particle interceptor traps (from the Vertex project off Central California in 1980 and off Mexico in 1981), suggest that microbial decomposition probably is initiated in the sea from inside the fecal pellets. Transmission and scanning electron microscopy indicate that bacterial populations are most abundant in the interior of fecal pellets obtained from the sea, but that the same pellets will acquire the surface bacterial lawn typically observed in laboratory studies if maintained aboard ship. If the fecal pellets are decomposed from the inside, then the principal agents are enteric bacteria or ingested, digestion-resistant bacteria, or both. Such bacteria may differ metabolically from those that colonize the fecal pellet surfaces. Further-more, the abundance of healthy-appearing bacteria inside the pellets suggests that their metabolic activities may produce microhabitats of reduced oxygen tension that could differ considerably from that of the pellet exteriors. Decomposition in these semi-enclosed microenvironments may proceed in a manner not yet predicted by models that attribute decomposition to well-aerated, surface-dwelling bacterial populations on fecal pellets in the sea.     

Environ indicator sensitivity to flux uncertainty in a phosphorus model of Lake Sidney Lanier, USA

Effective environmental impact assessment and management requires improved understanding of the organization and transformation of ecosystems in which independent agents are linked through an intricate network of energy, matter, and informational interactions. While advances have been made, we still lack a complete understanding of the processes that create, constrain, and sustain ecosystems. Network environ analysis (NEA) provides one approach for building novel ecosystem insights, but it is model dependent. As ecological modeling is an imprecise art, often complicated by inadequate empirical data, the utility of NEA may be limited by model uncertainty. Here, we investigate the sensitivity of NEA indicators of ecosystem growth and development to flow and storage uncertainty in a phosphorus model of Lake Sidney Lanier, USA. The indicators are total system throughflow (TST), total system storage (TSS), total boundary input (Boundary), Finn cycling index (FCI), ratio of indirect-to-direct flows (Indirect/Direct), indirect flow index (IFI), network aggradation (AGG), network homogenization (HMG), and network amplification (AMP). Our results make two primary contributions. First, they demonstrate that five of the indicators – FCI, Indirect/Direct, IFI, AGG and HMG – are relatively robust to the flow and storage uncertainty in the Lake Lanier model. This stability lets us draw robust conclusions about the Lake Lanier ecosystem organization (e.g., phosphorus flux in the lake is dominated by internal processes) in spite of uncertainties in the model. Second, we show that the majority of the indicators co-vary and that most of their common variation could be mapped onto two latent factors, which we interpret as (1) system integration and (2) boundary influences.     

Linking fate model in freshwater and PBPK model to assess human internal dosimetry of B(a)P associated with drinking water

In the present study, we demonstrate an integrated modeling approach for predicting internal tissue concentrations of chemicals by coupling a multimedia environmental model and a generic physiologically based pharmacokinetic (PBPK) model. A case study was designed for a region situated on the Seine river watershed, downstream of the Paris megacity, and for benzo(a)pyrene emitted from industrial zones in the region. In this case study, these two models are linked only by water intake from riverine system for the multimedia model into human body for the PBPK model. The limited monitoring data sets of B(a)P concentrations in bottom sediment and in raw river water, obtained at the downstream of Paris, were used to re-construct long-term daily concentrations of B(a)P in river water. The re-construction of long-term series of B(a)P level played a key role for the intermediate model calibration (conducted in multimedia model) and thus for improving model input to PBPK model. In order to take into account the parametric uncertainty in the model inputs, some input parameters relevant for the multimedia model were given by probability density functions (PDFs); some generic PDFs were updated with site-specific measurements by a Bayesian approach. The results of this study showed that the multimedia model fits well with actual annual measurements in sediments over one decade. No accumulation of B(a)P in the organs was observed. In conclusion, this case study demonstrated the feasibility of a full-chain assessment combining multimedia environmental predictions and PBPK modeling, including uncertainty and sensitivity analyses.     

我国中亚热带人工林水热通量对干旱差异响应的模拟研究

季节性干旱现象在我国中亚热带地区时有发生,为了研究该区域大气-生态系统之间的相互作用关系及其碳水收支状况,2002年起在江西省千烟洲（26.7°N,115.1°E）人工林生态系统建立了通量观测塔。2003年7月该人工林生态系统遭遇了历史上少有的高温少雨天气,本研究应用基于生理生态学过程的EALCO（Ecological Assimilation of Land and Climate Observation）模型及2003和2004年通量观测数据对该生态系统的水热通量进行了模拟,同时分析了干旱胁迫对它们产生的影响。结果显示,模型能够很好的模拟该生态系统的能量通量的日变化,净辐射、显热和潜热通量模拟值与实测值相关系数的平方（R2）及标准差分别为0.99和8.05 W.m-2;0.81和41.02 W.m-2;0.90和31.49 W.m-2,模型可以解释87%的日蒸散量的变化。从模拟结果看,2003年7月下旬（发生较严重干旱胁迫）较2004年同期（干旱程度轻）相比,冠层及土壤水势下降约2倍,植物蒸腾的日变化形式改变,根系吸水滞后冠层蒸腾的时间缩短约半小时,冠层导度下降40%～60%。模拟与观测结果均表明,2003年7月下旬每天正午的波文比大都介于1～2.2,而2004年同期正午的波文比则介于0.2～0.6。EALCO模型通过Ball模型将植物碳水过程耦合在一起,从而可以很好的模拟植物的气孔行为,进而准确的模拟植物水热过程对干旱的响应。土壤水分匮乏对冠层导度的限制是2003年干旱期间冠层潜热通量模拟值下降的根本原因。     

我国中亚热带人工林水热通量对干旱差异响应的模拟研究

季节性干旱现象在我国中亚热带地区时有发生,为了研究该区域大气-生态系统之间的相互作用关系及其碳水收支状况,2002年起在江西省千烟洲(26.7°N,115.1°E)人工林生态系统建立了通量观测塔。2003年7月该人工林生态系统遭遇了历史上少有的高温少雨天气,本研究应用基于生理生态学过程的EALCO(Ecological Assimilation of Land and Climate Observation)模型及2003和2004年通量观测数据对该生态系统的水热通量进行了模拟,同时分析了干旱胁迫对它们产生的影响。结果显示,模型能够很好的模拟该生态系统的能量通量的日变化,净辐射、显热和潜热通量模拟值与实测值相关系数的平方(R2)及标准差分别为0.99和8.05 W.m-2;0.81和41.02 W.m-2;0.90和31.49 W.m-2,模型可以解释87%的日蒸散量的变化。从模拟结果看,2003年7月下旬(发生较严重干旱胁迫)较2004年同期(干旱程度轻)相比,冠层及土壤水势下降约2倍,植物蒸腾的日变化形式改变,根系吸水滞后冠层蒸腾的时间缩短约半小时,冠层导度下降40%～60%。模拟与观测结果均表明,200...     

Modification of a stream temperature model with Beer's law and application to GaoShan Creek in Taiwan

A physics-based stream temperature model [Tung, C.P., Lee, T.Y., Yang, Y.C., 2006. Modelling climate-change impacts on stream temperature of Formosan Landlocked Salmon habitat. Hydrol. Process. 20, 1629–1649] was improved by incorporating shading effects caused by both cliff terrain and riverbank dense vegetation to simulate hourly stream temperature variations in 1 day. Daily maximal stream temperature is a critical factor to the habit distribution of the Formosan Landlocked Salmon, an important and endangered species. Currently, it only can be found in ChiChiaWan Creek and GaoShan Creek in Taiwan. The former stream temperature model only considers the shading effects of cliff terrain and works well for ChiChiaWan Creek, but overestimates stream temperatures of GaoShan Creek having dense riverbank vegetative covers. The model was modified with the Beer's law and a parameterization scheme to describe the diminishing of the incident solar radiation to take vegetative shading effects into account. Simulation results of GaoShan Creek show the success of this improvement. The shading effects induced by both terrain and vegetation can significantly affect stream temperature distributions. Simulation experiments were conducted to indicate shading effects are varied in different watersheds and seasons.     

Drinking water biotic safety of particles and bacteria attached to fines in activated carbon process

In this paper, the drinking water biotic safety of particles and bacteria attached to fines in activated carbon process was investigated by actual treatment process and advanced treatment pilot trial with granular activated carbon. In the experiment, the particles were detected by IBR particle calculating instrument, the activated carbon fines were counted on the basis of the most probable number (MPN) with a microscope, the total number of bacteria was analyzed between the conventional agar culture medium and the one with R2A, and the bacteria attached to activated carbon fines was resolved by the homogenization technique. The experimental results showed that the average total number of particles was 205 CNT/mL in the activated carbon effluent during a filter cycle, of which the number of particles with sizes > 2 μm was 77 CNT/mL more than the present particle control criterion of the American drinking water product standard (50 CNT/mL). The backwash of low density and long duration lowered particle number in the effluent. The MPN of activated carbon fines in the effluent was between 400 and 600 CNT/L, which accounted for less than 5‰ of the total particles from activated carbon filtration for a poor relative level (R ² = 0.34). The microorganisms in activated carbon effluent consisted mostly of heterotrophic bacillus and the total bacteria number was five times as high as that of the inflow, i.e. the effluent from sand filter. The actual bacteria number may be truly indicated by the detection technique with R2A culture medium compared with the traditional agar cultivation. The inactivation efficiency of bacteria attached to activated carbon fines was less than 40% under 1.1 mg/L of chlorine contacting for 40 min. Results showed that the particles and bacteria attached to activated carbon fines may influence drinking water biotic safety, and that the effective control measures need to be further investigated.     

Using spatial smoothing to model a functional regression estimator to points on a lattice with application to surface-level ozone in the Eastern United States

Environmental and Ecological Statistics - Spatial functional regression methods allow researchers to model spatially dependent functional random variables, often using a kriging-based interpolation...     

Evaluation and application of a three-dimensional water quality model in a shallow lake with complex morphometry

Fundamental hydrodynamic and ecological processes of a lake or reservoir could be adequately depicted by one-dimensional (1D) numerical simulation models. Whereas, lakes with significant horizontal water quality and hydrodynamic gradients due to their complex morphometry, inflow or water level fluctuations require a three-dimensional (3D) hydrodynamics and ecological analyses to accurately simulate their temporal and spatial dynamics. In this study, we applied a 3D hydrodynamic model (ELCOM) coupled with an ecological model (CAEDYM) to simulate water quality parameters in three bays of the morphologically complex Lake Minnetonka. A considerable effort was made in setting up the model and a systematic parameterization approach was adopted to estimate the value of parameters based on their published values. Model calibration covered the entire length of the simulation periods from March 29 to October 20, 2000. Sensitivity analysis identified the top parameters with the largest contributions to the sensitivity of model results. The model was next verified with the same setup and parameter values for the period of April 25 to October 10, 2005 against field data. Spatial and temporal dynamics were well simulated and model output results of water temperature (T), dissolved oxygen (DO), total phosphorus (TP) and one group of algae (Cyanobacteria) represented as chlorophyll a (Chla) compared well with an extensive field data in the bays. The results show that the use of the model along with an accurate bathymetry, a systematic calibration and corroboration (verification) process will help to analyze the hydrodynamics and geochemical processes of the morphologically complex Lake Minnetonka. An example of an ecological application of the model for Lake Minnetonka is presented by examining the effect of spatial heterogeneity on coolwater fish habitat analysis in 3D and under a scenario where horizontal spatial heterogeneity was eliminated (1D). Both analyses captured seasonal fish habitat changes and the total seasonal averages differed moderately. However, the 1D analysis did not capture local and short duration variabilities and missed suitable fish habitat variations of as much as 20%. The experiment highlighted the need for a 3D analysis in depicting ecological hot spots such as unsuitable fish habitats in Lake Minnetonka.     

Effect of electrokinetic transport on the vulnerability of PAH-degrading bacteria in a model aquifer

There has been increasing interest in employing electro-bioremediation, a hybrid technology of bioremediation and electrokinetics, to overcome the low bioavailability of hydrophobic organic contaminants (HOC) by homogenizing sorption-retarded HOC and immobilised microorganisms. Present electro-remediation approaches mainly aim at macroscale pollutant extraction and tend to neglect possible impacts of direct current (DC) on the physiology of microorganisms. The effect of weak electric fields (X = 1 V cm⁻¹) on the fitness of electrokinetically dispersed fluorene-degrading Sphingomonas sp. LB126 in bench-scale model aquifers was investigated by flow cytometry using propidium iodide (PI) as an indicator that distinguishes between PI-permeable (cells with porous membranes, i.e. dead or vulnerable) and PI-impermeable bacteria. After 15.5 h of DC treatment 56% of all cells recovered were dispersed at the centimetre scale relative to 29% in the absence of DC. There was no overall negative effect of the 15.5-h DC treatment on cell vulnerability, as 7.0% of the DC-treated bacteria exhibited PI-staining compared to 6.5% of the control population. Minor differences were observed in the subpopulation that had been mobilised by electroosmosis with an approximately twofold increase in the percentage of PI-stained cells relative to the control. Enhanced PI staining did not correlate with reduced culturability of the cells on rich-medium agar plates. Relative to the control, DC-treated cells mobilised by electroosmosis were threefold more culturable, confirming earlier data that that PI-cell membrane permeability does not always indicate reduced viability of oligotrophic environmental bacteria. Our findings suggest that electrokinetics is a valuable mechanism to transport viable and culturable polycyclic aromatic hydrocarbon (PAH)-degrading bacteria in soil or sediments.     

Sedimentary Pigments and Organic Matter in Relation to Benthic Fauna in the Tan-Shui Estuary,Taiwan

The benthic ecological structure of the Tan-Shui estuary, Taiwan is changed due to long term effects of dumping of urban wastewater and of engineering actions. to monitor these changes, we sampled and analyzed benthos and sediment from 12 stations on the estuary.

The composition of the dominant species of benthos varied seasonally, with molluscan and crustacean species having greater numbers and higher frequencies of occurrence than other species. the dominant taxa during winter were Nassarius sp. and Maldanidae at two stations. Analysis using Simpson's index and Shannon's index showed the benthic community varied more in coastal areas than in offshore areas.

Physicochemical analysis showed that most of the Tan-Shui estuary consisted of sandy sediment. the variations in concentrations of organic carbon and total nitrogen at each station were small. Although the concentrations of chlorophyll-a and carotenoid at all stations were generally low, the two stations had the highest concentrations, and we concluded that the concentration of pigments in these sediments was related to the abundance of benthos. the community structure of the benthos reflected the characteristics of the sediments, and benthic species exhibited selection of and adaptation to specific sedimentary environments.     

Sedimentary Pigments and Organic Matter in Relation to Benthic Fauna in the Tan-Shui Estuary, Taiwan

The benthic ecological structure of the Tan-Shui estuary, Taiwan is changed due to long term effects of dumping of urban wastewater and of engineering actions. to monitor these changes, we sampled and analyzed benthos and sediment from 12 stations on the estuary.

The composition of the dominant species of benthos varied seasonally, with molluscan and crustacean species having greater numbers and higher frequencies of occurrence than other species. the dominant taxa during winter were Nassarius sp. and Maldanidae at two stations. Analysis using Simpson's index and Shannon's index showed the benthic community varied more in coastal areas than in offshore areas.

Physicochemical analysis showed that most of the Tan-Shui estuary consisted of sandy sediment. the variations in concentrations of organic carbon and total nitrogen at each station were small. Although the concentrations of chlorophyll-a and carotenoid at all stations were generally low, the two stations had the highest concentrations, and we concluded that the concentration of pigments in these sediments was related to the abundance of benthos. the community structure of the benthos reflected the characteristics of the sediments, and benthic species exhibited selection of and adaptation to specific sedimentary environments.     

Assessing environmental factors in red spruce (Picea rubens Sarg.) growth in the Great Smoky Mountains National Park, USA: From conceptual model, envirogram, to simulation model

This study provides a method for assessing a multiplicity of environmental factors in red spruce growth in the Great Smoky Mountains National Park (GSMNP) of Southeastern USA. Direct and indirect factors in the annual growth increment are first organized into a schematic input-output envirogram (ARIRS), and this information is then used to construct a simulation model (ARIM). The envirogram represents a structured conceptualization of most environmental factors involved in growth, as developed from relevant literature. This interdisciplinary synthesis distinguishes direct vs. indirect factors in growth and takes account of the systems ecology concept that indirect factors may be as important as or more important than direct ones in regulating growth. The ARIRS envirogram summarizes hierarchically organized, within- and cross-scale, local-to-global interactions, and its construction makes it obvious that growth is influenced by many cross-scale spatiotemporal interactions. More research on genecology is still needed to clarify the role of phenotypic plasticity and adaptive capacity in nutrient cycling, global change, and human disturbance.     

Distributions and population structures of two intertidal estuarine polychaetes in the lower St. Lawrence Estuary,with special reference to environmental factors

An intensive study of the spatial distribution ofNereis virens (Sars) andNephtys caeca (Fabricius) was conducted during the spring and autumn of 1986 in the lower St. Lawrence estuary. Statistical analysis showed that spatial variations in density, individual body weight and sexual maturity, particularly in the case ofNereis virens, are correlated with the intertidal level, with certain sediment characteristics, and with the thickness of the colonizable sediment layer. The density ofN. virens increases in an offshore-onshore direction, whereas that ofNephtys caeca decreases in the same direction. For both species, mean body weight increases downshore from the upper intertidal level. Other specific relationships exist in relation to sediment characteristics. Sexually matureNereis virens are found only at the lower intertidal level; sexual maturity inNephtys caeca was not studied. There were no changes in spatial distribution patterns between spring and autumn. The spatial distribution ofNereis virens parallels depth contours and may reflect its ability to inhabit environments which become more physically unstable in an offshore-onshore direction. This spatial distribution is consistent with a model whereby larvae are recruited in the upper intertidal zone and juveniles migrate downshore.     

An interval dynamic multimedia fugacity (IDMF) model for environmental fate of PAHs and their source apportionment in a typical oilfield,China

An interval dynamic multimedia fugacity (IDMF) model with a new validation criterion of interval average logarithmic residual error (IALRE) was developed in this study. The environmental fate of polycyclic aromatic hydrocarbons (PAHs) and their source apportionment in a typical oilfield of China were simulated from 1985 to 2010. The PAH concentrations predicted by the model were in agreement with the measured concentrations, which were indicated by the IALREs calculated at 0.41, 0.63, 0.52, and 0.58 for air, water, soil, and sediment, respectively. The multimedia concentrations of Σ16 PAHs were 29.55, 39.22, 31.98, and 26.69 times greater in 2010 than those in 1985, and were higher than any other year modelled. Additionally, 87.82% of PAHs remained in the soil in 2010. PAH source emission into the soil was the major modelled source, whereas PAH degradation in the air was the major modelled loss pathway; the dominant transfer process between the adjacent compartments was atmospheric deposition from air to soil. It was demonstrated that high-temperature combustion was the major source of PAHs in the air and soil, whereas biomass and coal combustion were attributed to water and sediment compartments. The IDMF model was effective in the dynamic source apportionment of PAHs.     

The environmental fate of thymol,a novel botanical pesticide,in tropical agricultural soil and water

In this study, the environmental fate of thymol, including hydrolysis, aqueous photolysis, soil sorption and soil degradation, was studied under conditions that simulated the tropical agricultural environment. This study was undertaken to supply basic information for evaluating the environmental risks of applying this new botanical pesticide to tropical crop production. The results showed that the hydrolysis of thymol was pH-dependent and accelerated by acidic conditions and high temperatures. However, the hydrolysis rate was far lower than the aqueous photolysis rate, indicating that direct photolysis is an important dissipation pathway for thymol in water. The sorption of thymol by three tropical soils was consistently well described by the Freundlich model, and the sorption coefficients increased in the order sandy soil < loamy soil < clay soil, a characterization that depended on the organic carbon contents of the soil. The soil degradation rate of thymol decreased in the order sandy soil > loamy soil > clay soil, which has a negative correlation with the sorption of thymol in soils. We concluded that the degradation rates of thymol in tropical soil and water are fast: thymol in water is photodegraded (50%) by sunlight within 28 h, and the thymol in soils is degraded (50%) within 8.4 d. Therefore, the environmental risk to the surrounding soils and water of thymol application for tropical crop production is low.     

Occurrence,fate, and risk of the organic pollutants of the surface water watch List in European groundwaters: a review

Environmental Chemistry Letters - Groundwater is the main source of freshwater in the European Union, yet freshwaters are polluted by organic contaminants if contaminants are not efficiently...