Temporal genetic variation in populations of the limpet Cellana grata from Hong Kong shores

Variations in the relative contributions of gene flow and spatial and temporal variation in recruitment are considered the major determinants of population genetic structure in marine organisms. Such variation can be assessed through repeated measures of the genetic structure of a species over time. To test the relative importance of these two phenomena, temporal variation in genetic composition was measured in the limpet Cellana grata, among four annual cohorts over 10 years at four rocky shores in Hong Kong. A total of 408 limpets, comprising individuals from 1998, 1999, 2006 and 2007 cohorts were screened for genetic variation using five microsatellite loci. Minor but significant genetic differentiation was detected among samples from the 1998/1999 collection (F _ST = 0.0023), but there was no significant differentiation among the 2006/2007 collection (F _ST = 0.0008). Partitioning of genetic variation among shores was also significant in 1998/1999 but not in the 2006/2007 collection, although there was no correlation between genetic and geographic distances. There was no significant difference between collections made in 1998/1999 and 2006/2007. This lack of clear structure implies a high level of gene flow, but differentiation with time may be the result of stochastic recruitment variation among shores. Estimates of effective population size were not high (599, 95% C.L. 352–11397), suggesting the potential susceptibility of the populations to genetic drift, although a significant bottleneck effect was not detected. These findings indicate that genetic structuring between populations of C. grata in space and time may result from spatio-temporal variation in recruitment, but the potential development of biologically significant differentiation is suppressed by a lack of consistency in recruitment variability and high connectivity among shores.     

Comparison of allozyme and mitochondrial DNA spatial differentiation in the limpet Patella vulgata

Allozyme and restriction enzyme analysis of mtDNA was used to study variation in samples from British populations of the marine limpet Patella vulgata in two regions. South Wales and Northeast England. Allozyme analysis revealed significant differences in allele frequencies among samples. However F _ST (population differentiation) values were no higher between than within regions, indicating that genetic heterogeneity was localised and not related to geographic separation. For mtDNA, samples from South Wales exhibited higher haplotype diversity values than samples from Northeast England. In addition there were substantial differences in the haplotype distribution between regions. The value of , the haploid analogoue of F _ST , was low within regions (=0.09) but high between regions (=0.44). The estimated difference in migration rate for allozymes and mtDNA exceed the neutral expectation, unless it is assumed that there are influential differences in the magnitude of female and male gametic dispersal.     

Fine-scale patchiness and genetic heterogeneity of recruits of the corallivorous gastropod Drupella cornus

The size-frequency distributions and genetic composition of recruits of the corallivorous snail Drupella cornus (Röding, 1798) were examined in outbreak populations collected from Ningaloo Reef, Western Australia in August 1990. The recruits are found in groups on digitate Acropora spp. corals. Among coral colonies, mean lengths of recruits in our samples ranged from <9 to 22 mm, but the snails within a group were generally similar in size. Despite the fact that D. cornus has planktonic larvae, there were marked genetic differences between groups of recruits on different coral colonies. The relatively large genetic subdivision among groups of recruits within sites over distances <80 m was measured as a value of F _ST (standardized variance in allelic frequencies) of 0.044. This was three times the value from comparisons of pooled samples of recruits from areas up to 119 km apart, and six times as great at the genetic subdivision among populations of adults over a distance of 180 km. Much of the genetic heterogeneity among groups of recruits is associated with mean size of the snails. Taken together, the size-frequency distributions and the genetic differences indicate that recruits within the same coral colony shared a common history of settlement, suggesting a cohesiveness of groups of larvae. Although the mechanisms for this patchiness are not understood, one implication is that studies of size-frequency distributions and genetic composition of cohorts of D. cornus must treat the group, not the individual snail, as the unit of replication.     

Isolation by distance in the scleractinian coral <Emphasis Type="Italic">Seriatopora hystrix</Emphasis> from the Red Sea

Pelagic dispersal of larvae in sessile marine invertebrates could in principle lead to a homogeneous gene pool over vast distances, yet there is increasing evidence of surprisingly high levels of genetic differentiation on small spatial scale. To evaluate whether larval dispersal is spatially limited and correlated with distance, we conducted a study on the widely distributed, viviparous reef coral Seriatopora hystrix from the Red Sea where we investigated ten populations separated between ~0.150 km and ~610 km. We addressed these questions with newly developed, highly variable microsatellite markers. We detected moderate genetic differentiation among populations based on both F _ST and R _ST (0.089 vs. 0.136, respectively) as well as considerable heterozygote deficits. Mantel tests revealed isolation by distance effects on a small geographic scale (≤20 km), indicating limited dispersal of larvae. Our data did not reveal any evidence against strictly sexual reproduction among the studied populations.     

Molecular genetic structure suggests limited larval dispersal in grass rockfish,<Emphasis Type="Italic"> Sebastes rastrelliger</Emphasis>

The grass rockfish (Sebastes rastrelliger Jordan and Gilbert, 1880) is a non-migratory, benthic, near shore species distributed along rocky reefs and sea grass beds. It occurs from Baja California, Mexico, to Oregon, USA, spanning the Oregonian and Californian biogeographic provinces. In California this fish receives intense fishing pressure from an expanding and loosely regulated live-fish fishery. It is not known whether or by what mechanism larvae and juveniles are retained locally or dispersed widely during the early life-history phase. Tissue samples of S. rastrelliger were collected between 1996 and 2001 from 405 adult fish at eight sites (42.70°N; 124.50°W to 32.67°N; 117.25°W) spanning the species range. Individuals were surveyed for polymorphism at six microsatellite loci. Allele frequency heterogeneity was not significant among all sites (F_ST=0.001; P=0.18), nor in pairwise comparisons, but a clear correlation of genetic and geographic distance was detected (P=0.019). Fit of genetic and geographic distance was stronger within biogeographic provinces than at a range-wide scale, suggesting that populations north and south of the Point Conception biogeographic boundary are not in equilibrium with respect to migration and genetic drift. Estimates of mean coastal dispersal distances associated with the isolation-by-distance relationship are on the order of 10 km generation^–1. Such limited dispersal in a species with a pelagic early life history suggests active retention mechanisms near the shore. This has important implications for coastal management zones and design of marine reserves.Communicated by J.P. Grassle, New Brunswick     

Population genetic and phylogeographic structure of wahoo,<Emphasis Type="Italic"> Acanthocybium solandri</Emphasis>, from the western central Atlantic and central Pacific Oceans

The wahoo, Acanthocybium solandri (Cuvier, 1832), is a pelagic, highly migratory, scombroid fish, distributed worldwide throughout tropical and warm temperate seas. To evaluate population genetic and phylogeographic structure against a null hypothesis of panmixia, the entire mitochondrial DNA control-region (~890 base pairs) was sequenced for 231 wahoo. Samples were collected from 1997 to 2001 from seven sites: North Carolina (NC; n=23), east central Florida (CF; n=30), Bimini, Bahamas (BB; n=40), southern tip of Florida (SF; n=21), Cayman Islands (CI; n=23), northern Gulf of Mexico (NG; n=54), and Hawaii (HI; n=40). Inter-annual samples were obtained from four of these locations (NC, BB, SF, NG). Seventeen haplotypes were shared by individuals within and among samples; 187 singleton haplotypes were observed. Within-sample haplotype diversities ranged from 0.995 to 1.000 (overall h=0.999) and within-sample nucleotide diversities ranged from 0.049 to 0.055 (overall =0.053). A neighbor-joining tree based on inter-haplotypic distances revealed two monophyletic lineages differing by 13.6% nucleotide divergence. Nested within each major lineage were several, well-supported subclades. There was no evidence of temporal heterogeneity in haplotype distributions. Partitioning mtDNA variation, 99.75% of the variance was within samples and 0.25% (P=0.307) between samples; the fixation index (_ST=0.0025) was not significant. Likewise, pairwise _ST values were low or negative, and none were significant on a table-wide basis. Exact tests for sample differentiation in haplotypes were also non-significant. All population analyses were consistent with the null hypothesis of panmixia. However, analytical power was limited by sample size. Mismatch distributions were inconsistent with expected distributions based on sudden-expansion and static-growth models. Wahoo exhibit concurrently high haplotype and nucleotide diversities, presumably a consequence of secondary contact between historical subpopulations rather than a long, stable evolutionary history. Given the level of geographic and individual sampling, wahoo thus far represent the sole example of a scombroid or xiphioid fish exhibiting coarse-grain genetic homogeneity across a broad, inter-oceanic range despite a deeply coalescing genealogical structure. Accordingly, cooperative fishery management on a broad, inter-ocean scale may be warranted.Communicated by J.P. Grassle, New Brunswick     

Genetic population structure in two tropical sponge-dwelling shrimps that differ in dispersal potential

The spatial context in which host races of parasitic animals originate is a central issue in the controversial theory of sympatric speciation. Sponge-dwelling shrimps in the genus Synalpheus provide a good system for evaluating the possibility of resource-associated divergence in sympatry. I used allozyme electrophoresis to assess the genetic population structure of two Caribbean Synalpheus species sampled in 1988 to 1990 at a hierarchy of spatial scales. S. brooksi Coutière is a host-generalist, using several sponge species in an area, and develops directly, with no planktonic larval stage. G-tests and estimates of F _ST revealed highly structured populations in this species, with significant differentiation among samples from individual reefs within a region, and strong divergence among regions (Panama, Belize, Florida). Moreover, samples of S. brooksi taken from the two sponges Spheciospongia vesparium (Lamarck) and Agelas clathrodes (Schmidt) in Panama, and separated by 3 km, showed significant differentiation at both of the loci that were polymorphic in these populations. Genetic distances between these host-associated populations averaged >60% greater than distances between samples from the same host species and were comparable to, or greater tha, those for some inter-regional comparisons. These genetic data corroborate a previous finding of demographic differences between the same populations. The second species, S. pectiniger Coutière, occurs only in Spheciospongia vesparium, and produces swimming larvae. Although allele frequencies in this species differed significantly among the three regions, S. pectiniger showed no differentiation within regions, and significantly lower differentiation (F _ST) among regions than its direct-developing congener. These data suggest that genetic population structure in these two commensal crustaceans is related to dispersal potential, and that restricted dispersal may allow the divergence of host-associated populations on a local scale.     

Genetic differentiation of bicolor damselfish (Eupomacentrus partitus) populations in the Florida Keys

Electrophoretic variation in proteins encoded by 23 loci revealed substantial genetic differentiation among populations of bicolor damselfish (Eupomacentrus partitus) collected from four coral reefs in the Florida Keys, USA, during 1986–1988. Genetic differentiation was concentrated between a sample collected from Little Grecian Rocks Reef (LGR) and the remaining samples, including fish from a reef only 600 m distant (Grecian Rocks Reef). Genetic distinction of the LGR sample derived from significantly heterogenous allelic frequencies at six of eight polymorphic loci. Aco-1 (aconitase); Ada (adenosine deaminase); Gpi-2 (glucosephosphate isomerase); Ldh-2 and Ldh-3 (lactate dehydrogenase); and Me-1 (malic enzyme); nevertheless, differentiation at cytosolic aconitase (Aco-1) far exceeded that observed for other loci (fixation index, F _ST=0.482), and differences in Aco-1 allele frequencies were largely responsible for large genetic distances (0.20) between LGR and the other reefs. Paradoxically, estimates of numbers of migrants exchanged between reefs per generation (mN _e=17.47) indicated the potential for extensive gene flow. The extent of genetic differentiation among these populations is evaluated relative to models of population genetic structure based on equilibrium between gene flow and natural selection or genetic drift.     

Population genetic structure of the milkfish,<Emphasis Type="Italic"> Chanos chanos</Emphasis>, based on PCR-RFLP analysis of the mitochondrial control region

The milkfish, Chanos chanos (Forsskål, 1775) is a pelagic, monotypic gonorhynchiform widely distributed in the tropical Indo-Pacific. This study evaluates temporal variability of milkfish samples from the Philippine archipelago, and spatial variability at two geographic scales based on restriction fragment length polymorphism (RFLP) analysis of a portion of the mitochondrial control region. High levels of genetic diversity characterize the milkfish control region (mean h=0.908, =1.59%), with 74 haplotypes detected among the 367 fish analyzed. For temporal analysis of Philippine samples, milkfish were collected over 2 years from three sites (inter-annual variation), and sampled twice within a year during different seasons at four sites (intra-annual variation). No significant temporal variability was detected between or within years. Significant spatial differentiation among the Philippine samples was observed (F_ST=0.006, P<0.05), with two northeastern samples, Claveria and Dingalan, found to be genetically distinct. However, an hierarchical analysis of molecular variance (AMOVA), where samples were grouped into four geographic regions, revealed very low levels of genetic partitioning, with less than 1% of the total variation attributed to between-region differences, and lack of genetic structure. Nonetheless, the existence of putative northeastern Philippine populations is not discounted. Strong genetic structure across broad geographical scales was revealed by AMOVA, with 11% of the molecular variance based on haplotype frequencies allocated between three distinct groups: Indian Ocean, west Pacific (Philippines) and north central Pacific (Hawaii) The broad-scale genetic structure points to limited gene flow among disjunct Indo-Pacific populations.Communicated by T. Ikeda, Hakodate     

Protection of Genetic Diversity and Maintenance of Connectivity among Reef Corals within Marine Protected Areas

Abstract: High‐latitude coral reefs (HLRs) are potentially vulnerable marine ecosystems facing well‐documented threats to tropical reefs and exposure to suboptimal temperatures and insolation. In addition, because of their geographic isolation, HLRs may have poor or erratic larval connections to tropical reefs and a reduced genetic diversity and capacity to respond to environmental change. On Australia's east coast, a system of marine protected areas (MPAs) has been established with the aim of conserving HLRs in part by providing sources of colonizing larvae. To examine the effectiveness of existing MPAs as networks for dispersal, we compared genetic diversity within and among the HLRs in MPAs and between these HLRs and tropical reefs on the southern Great Barrier Reef (GBR). The 2 coral species best represented on Australian HLRs (the brooding Pocillopora damicornis and the broadcast‐spawning Goniastrea australensis) exhibited sharply contrasting patterns of diversity and connectedness. For P. damicornis, the 8‐locus genetic and genotypic diversity declined dramatically with increasing latitude (N_a= 3.6–1.2, H_e= 0.3–0.03, N_g:N = 0.87–0.06), although population structure was consistent with recruitment derived largely from sexual reproduction (G_o:G_e= 1.28–0.55). Genetic differentiation was high among the HLRs (F_ST[SD]= 0.32 [0.08], p < 0.05) and between the GBR and the HLRs (F_ST= 0.24 [0.06], p < 0.05), which indicates these temperate populations are effectively closed. In contrast for G. australensis, 9‐locus genetic diversity was more consistent across reefs (N_a= 4.2–3.9, H_e= 0.3–0.26, N_g:N = 1–0.61), and there was no differentiation among regions (F_ST= 0.00 [0.004], p > 0.05), which implies the HLRs and the southern GBR are strongly interconnected. Our results demonstrate that although the current MPAs appear to capture most of the genetic diversity present within the HLR systems for these 2 species, their sharply contrasting patterns of connectivity indicate some taxa, such as P. damicornis, will be more vulnerable than others, and this disparity will provide challenges for future management.     

New expansions in old clades: population genetics and phylogeny of Gnatholepis species (Teleostei: Gobioidei) in the Pacific

Species of the reef goby genus Gnatholepis exhibit enormous geographic ranges with little evidence of population segregation detectable based on mitochondrial DNA. To determine if genetic differentiation is evident with more rapidly evolving markers, seven microsatellite loci were screened from the species Gnatholepis anjerensis and G. scapulostigma and population segregation was tested among fish from across the South Pacific. Both AMOVA and pairwise F _ST analyses showed that, in concordance with previous mitochondrial results, most genetic variance occurs within individual populations, as population differentiation is evident only over the largest distances (>3,700 km). This result is contrasted with previous studies demonstrating that despite their relatively long larval periods, some gobiid fishes exhibit population differentiation on small (<100 km) geographic scales. Coalescence analysis showed that current Pacific populations of these species originated in the Pleistocene, presumably related to sea level fluctuations associated with episodes of glaciation. However, rate analysis based on a phylogeny of Gnatholepis species indicates that the species themselves are much older, consistent with a complex history of rapid, short-term population contractions and expansions, with corresponding rapid dispersal.     

Cryptic isolation of Gulf of California shovelnose guitarfish evidenced by mitochondrial DNA

The shovelnose guitarfish Rhinobatos productus is an evolutionarily, ecologically, and economically important ray, with a continuous distribution from San Francisco, California (USA), to Mazatlan, Sinaloa, and in the Gulf of California (Mexico). Regional studies have revealed morphometric differences between shovelnose from the Gulf of California and the Pacific coast of Baja California, which may result from phenotypic plasticity in the presence of high levels of gene flow or from a degree of genetic differentiation in the presence of cryptic isolation within a continuous distribution. We used PCR-RFLP of the mitochondrial control region to assess the degree of genetic differentiation between Gulf of California and Pacific shovelnose guitarfish. We found very high levels of molecular diversity (averages: h=0.77, =1.19%), which may be associated with historically large and stable populations, as well as very significant levels of genetic differentiation between gulf and Pacific samples (²=64, P<0.0001; _ST=0.63, P<0.0001, mean nucleotide divergence d=2.47%). We found a deep phylogeographic break between haplotypes from the gulf and the Pacific, which may suggest the existence of cryptic species but clearly indicates more than one evolutionarily significant unit of R. productus. Our results show a pattern of genetic structure and levels of differentiation consistent with the geological history of the region. Furthermore, these findings have wide-ranging implications for the management and conservation of cartilaginous fish in Mexico, as they reveal the existence of biological diversity that will go unnoticed without the genetic scrutiny of intraspecific variation and that is highly relevant for much needed management and conservation efforts.Communicated by P.W. Sammarco, Chauvin     

Genetic comparison of two populations of the deep-sea vent shrimp Rimicaris exoculata (Decapoda: Bresiliidae) from the Mid-Atlantic Ridge

Allozyme data are presented for populations of the bresiliid shrimp Rimicaris exoculata from two hydrothermal vent fields, Trans-Atlantic Geotraverse (TAG) and Broken Spur, located along the Mid-Atlantic Ridge. These indicate that all morphotypes of R. exoculata examined, including those previously interpreted as representing separate species, are conspecific. Conversely, genetic identity between a single specimen of Chorocaris sp. and R. exoculata was high for intergeneric comparisons. Genetic variation in the populations of R. exoculata (H _o =0.034 to 0.056) was in the lower range of that estimated for other vent organisms, but similar to values obtained for other species of caridean shrimps in previous genetic studies. F-statistics were used to examine the population structure of R. exoculata. Estimates of variance of allele frequencies among populations (F _ST ) between TAG and Broken Spur were very low (mean F _ST =0.001), indicating no significant genetic differentiation between these populations although they were separated by 370 km. The number of migrants per generation was estimated from F _ST and by a private-alleles method, and indicates that migration between the two fields exceeds 100 individuals per generation. This may be because of efficient larval or adult migration or a combination of both. Estimates of the correlation between homologous alleles between individuals within local populations (F _IS ) of R. exoculata were high at two enzyme loci and indicate a heterozygote deficiency which caused a significant deviation from genotype frequencies expected under Hardy-Weinberg conditions. This deficiency was caused by the occurrence of rare homozygous genotypes in small individuals. In large individuals, rare alleles decreased in frequency or disappeared completely. This is discussed in relation to previous genetic investigations on other vent and nonvent organisms.     

High levels of genetic subdivision in peripherally isolated populations of the atherinid fish Craterocephalus capreoli in the Houtman Abrolhos Islands,Western Australia

The atherinid fish Craterocephalus capreoli Rendahl is abundant in the Houtman Abrolhos Islands, 70 km off the Western Australia coast and 250 km south of the southern limit of the range of the species along the mainland. Electrophoretic examination of 7 allozyme loci at 17 sites in the Houtman Abrolhos revealed a substantially lower level of polymorphism than found in an earlier study of the species in its mainland distribution, with many of the uncommon alleles and some common ones missing. There is a very high degree of genetic subdivision among the populations in the Houtman Abrolhos, measured by a mean F _ST of 0.437 over a distance of 35 km. This F _ST (standardized variance in allelic frequencies) is six times that found previously among populations along the mainland coast over distances up to 850 km. The subdivision of populations in the Houtman Abrolhos is similar within one island group on a scale up to 12 km, and between two groups that are separated by 15 km of deep water. Significant differences in allelic frequencies were found between populations from the open shore and enclosed lagoons less than 800 m apart, but the overall levels of subdivision were similar for the two types of environment. Previous work had shown high levels of genetic subdivision in the Houtman Abrolhos for a gastropod with direct development. The results for C. capreoli demonstrate that the archipelago favours subdivision even for a species with potentially much greater mobility and different life history.     

Allozyme variation in European populations of the oyster Ostrea edulis

Variations at 22 enzyme coding loci were surveyed in 11 populations of the oyster Ostrea edulis L., which were sampled between 1988 and 1990 along the Atlantic and Mediterranean coasts of Europe. Atlantic oyster beds suffered a steady decline during the last century, and restocking of beds with oysters of foreign origin has probably resulted in a high degree of interbreeding of natural oyster stocks from all Atlantic Europe. Our study confirms the low levels of genetic variability previously reported for the oyster populations from the Atlantic coasts, and extends it to the Mediterranean coasts. The locus arginine-kinase (ARK ^*) exhibited a high degree of interpopulation differentiation (F _ST=0.289), resulting from extensive variation in gene frequencies along a geographical cline. However, the overall genetic differentiation between populations was slight, and similar to that reported for other local populations of bivalves (mean genetic distance between populations is 0.010, mean F _ST=0.062). A general pattern of increasing differentiation along the coastline in an Atlantic-mediterranean direction emerged; but genetic differentiation among the Atlantic populations was not significantly lower than that observed among the Mediterranean populations. This and other results suggest that the effects of extensive transplantation of oysters among various areas in Europe are detectable only in some particular localities. The geographical distribution of low-frequency alleles suggests a restriction to gene flow outwards from the Mediterranean Sea, across the Straits of Gibraltar.     

Ancient divergences and recent connections in two tropical Atlantic reef fishes<Emphasis Type="Italic"> Epinephelus adscensionis</Emphasis> and<Emphasis Type="Italic"> Rypticus saponaceous</Emphasis> (Percoidei: Serranidae)

Reef habitats of the tropical Atlantic are separated by river outflows and oceanic expanses that may preclude larval dispersal or other population connections in shorefishes. To examine the impact of these habitat discontinuities on the intraspecific phylogeography of reef-associated species we conducted range-wide surveys of two amphi-Atlantic reef fishes that have dispersive pelagic larval stages. Based on 593 bp of mtDNA cytochrome b from the rock hind Epinephelus adscensionis and 682 bp from the greater soapfish Rypticus saponaceous (n=109 and 86, respectively), we found evidence of relatively ancient separations as well as recent surmounting of biogeographic barriers by dispersal or colonization. Rock hind showed slight but significant population genetic differentiation across much of the tropical Atlantic Ocean (_ST=0.056), but deep divergence between the southeastern United States and seven other localities from the Bahamas to the south, central and east Atlantic (mean pairwise d=0.040, overall _ST=0.867). The geographic distribution of the two rock hind lineages is highly unusual in genetic studies of Caribbean Sea reef fishes, because those lineages are separated by less than 250 km of open water within a major biogeographic region. In contrast, highly significant population genetic structure was observed among greater soapfish from the SW Caribbean, Brazil, and mid-Atlantic ridge (_ST=0.372), with a deep evolutionary separation distinguishing putative R. saponaceous from West Africa (mean pairwise d=0.044, overall _ST=0.929). Both species show evidence for a potential connection between the Caribbean and Brazilian provinces. While widespread haplotype sharing in rock hind indicates that larvae of this species cross oceanic expanses of as much as 2000 km, such a situation is difficult to reconcile with the isolation of populations in Florida and the Bahamas separated by only 250 km. These findings indicate that populations of some species in disjunct biogeographic zones may be isolated for long periods, perhaps sufficient for allopatric speciation, but rare gene flow between zones may preclude such evolutionary divergence in other species.Communicated by P.W. Sammarco, Chauvin     

Genetic structure of Patagonian toothfish (Dissostichus eleginoides) populations on the Patagonian Shelf and Atlantic and western Indian Ocean Sectors of the Southern Ocean

The genetic structure of Patagonian toothfish populations in the Atlantic and western Indian Ocean Sectors of the Southern Ocean (SO) were analysed using partial sequences of the mitochondrial 12S rRNA gene and seven microsatellite loci. Both haplotype frequency data (F _ST>0.906, P<0.01) and microsatellite genotype frequency data (F _ST=0.0141–0.0338, P<0.05) indicated that populations of toothfish from around the Falkland Islands were genetically distinct from those at South Georgia (eastern Atlantic Sector SO), around Bouvet Island (western Atlantic Sector SO) and the Ob Seamount (western Indian Ocean Sector of the SO). Genetic differentiation between these populations is thought to result from hydrographic isolation, as the sites are separated by two, full-depth, ocean-fronts and topographic isolation, as samples are separated by deep water. The South Georgia, Bouvet and Ob Seamount samples were characterised by an identical haplotype. However, microsatellite genotype frequencies showed genetic differentiation between South Georgia samples and those obtained from around Bouvet Island and nearby seamounts (F _ST=0.0037, P<0.05). These areas are separated by large geographic distance and water in excess of 3,000 m deep, below the distributional range of toothfish (<2,200 m). No significant genetic differentiation was detected between samples around Bouvet Island and the Ob Seamount although comparisons may have been influenced by low sample size. These localities are linked by topographic features, including both ridges and seamounts, that may act as oceanic “stepping stones” for migration between these populations. As for other species of deep-sea fish, Patagonian toothfish populations are genetically structured at the regional and sub-regional scales.     

Sibling species in interstitial flatworms: a case study using<Emphasis Type="Italic"> Monocelis lineata</Emphasis> (Proseriata: Monocelididae)

The genetic relationships between morphologically indistinguishable marine and brackish-water populations of Monocelis lineata (O.F. Müller, 1774) (Proseriata: Monocelididae) were analysed by means of allozyme electrophoresis. Fifteen samples of M. lineata (13 from the Mediterranean and two from the Atlantic) from coastal marine and brackish-water habitats were examined for variation at 18 loci. Eleven loci were polymorphic in at least one population of M. lineata. Low levels of within-population genetic variability were found, with average observed and expected heterozygosity values ranging from H_o=0.015±0.015 to 0.113±0.044, and from H_e=0.028±0.028 to 0.138±0.054, respectively. The occurrence of a number of private alleles indicated a marked genetic divergence among populations of M. lineata, with Rogers genetic distances ranging from D_R=0.003 to 0.676 and a highly significant F_ST value (0.918±0.012, P<0.001). UPGMA (unweighted pair-group method using arithmetic average) cluster analysis and multidimensional scaling showed a clear genetic divergence between marine and brackish-water populations. Moreover, Atlantic and Mediterranean populations were sharply separated. Our results suggest that M. lineata is a complex of sibling species.Communicated by R. Cattaneo-Vietti, Genova     

Spatial and temporal genetic homogeneity in the Arctic surfclam (<Emphasis Type="Italic">Mactromeris polynyma</Emphasis>)

Commercially harvested marine bivalve populations show a broad range of population-genetic patterns that may be driven by planktonic larval dispersal (gene flow) or by historical (genetic drift) and ecological processes (selection). We characterized microsatellite genetic variation among populations and year classes of the commercially harvested Arctic surfclam, Mactromeris polynyma, in order to test the relative significance of gene flow and drift on three spatial scales: within commercially harvested populations in the northwest Atlantic; among Atlantic populations; and between the Atlantic and Pacific oceans. We found small nonsignificant genetic subdivision among eight populations from the northwest Atlantic (F _ST = 0.002). All of these Atlantic populations were highly significantly differentiated from a northeast Pacific population (F _ST = 0.087); all populations showed high inbreeding coefficients (F _IS = 0.432). We tested one likely source of heterozygote deficits by aging individual clams and exploring genetic variation among age classes within populations (a temporal Wahlund effect). Populations showed strikingly different patterns of age structure, but we found little differentiation among age classes. In one case, we were able to analyze genetic diversity between age classes older or younger than the advent of intensive commercial harvesting. The results generally suggest spatially broad and temporally persistent genetic homogeneity of these bivalves. We discuss the implications of the results for the biology and management of surfclam populations. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Stepping-stone gene flow in the solitary coral Balanophyllia elegans: equilibrium and nonequilibrium at different spatial scales

Limited dispersal should result in genetic differences between populations proportional to geographic distances of separation. This association between gene flow and distance can be disrupted by (1) continuing genetic exchange among distant populations, (2) historical changes in gene flow, and (3) physical barriers or corridors to dispersal. The movements of larvae are thought to determine dispersal capability in benthic marine invertebrates. The solitary scleractinian Balanophyllia elegans Verrill possesses crawling larvae capable of only limited dispersal. Paradoxically, however, inferred levels of gene flow between pairs of localities spread over much of the 4000 km range of B. elegans exhibited a weaker relationship with geographical separation than that expected for a linear array of populations in which all genetic exchange takes place between adjacent populations. In this paper, I examined the pattern of gene flow (inferred from the frequencies of eight polymorphic allozyme loci) in B. elegans at a smaller (1 to 50 km) spatial scale to determine (1) whether gene flow at this spatial scale conformed to the expectations of the stepping-stone model, and (2) whether continuing long-distance gene flow or historical changes in gene flow were responsible for the weak relationship between gene flow and distance observed previously at the rangewide spatial scale. Between May and August 1992, I collected 75 adults from each of 18 localities along the coast of Sonoma County, California, USA. These populations of B. elegans were significantly subdivided both among localities separated by 1 to 50 km (F _LT =0.053, Se=0.0075) and among patches separated by 4 to 8 m (F PL=0.026, SE=0.0023). The observed slope and correlation (r ²=0.54) between inferred levels of gene flow and the geographic distance at the 1 to 50 km spatial scale conformed to equilibrium expectations (obtained by simulation) for a linear stepping-stone model, although those from the rangewide spatial scale did not. This implies that the mechanisms conferring patterns of inferred genetic differentiation between localities in B. elegans differ fundamentally with spatial scale. At a scale of 1 to 50 km, continuing gene flow and drift have equilibrated and the process of isolation-bydistance may facilitate local adaptive change. At a broader spatial scale, historical changes in gene flow, perhaps affected by late Pleistocene climatic fluctuations, disrupt the equilibration of gene flow and genetic drift, so that genetic differentiation may not increase continuously with separation between populations.