In situ respiration of benthic communities in Castle Harbor,Bermuda

In situ measurements of community respiration were made at two stations in Castle Harbor, Bermuda, during April and May, 1971. Total community respiration was 20.67 and 19.11 ml O₂ m^-2 h^-1 at Stations 1 and 2, respectively, in April. In May, respiration increased with water temperature to 26.99 and 24.56 ml O₂ m^-2 h^-1. Significant differences (P<0.05) existed between stations and sampling periods. Bacterial respiration was estimated from sediment treatment with streptomycin-SO₄. Values ranged from 7.71 to 8.72 ml O₂ m^-2 h^-1 in April and May, respectively. No significant difference existed between sampling periods or stations. No detectable chemical O₂ demand of the sediment, determined by a formalin treatment, was found. Total community respiration was further compartmentalized into macrofaunal, meiofaunal, and microfaunal-microfloral components. Both the macrofaunal and meiofaunal respiration was negligible compared to that estimated for the microfaunal-microfloral component.Contribution No. 2708 from the Woods Hole Oceanographic Institution, and Contribution No. 552 from the Bermuda Biology Station. This study was supported in part by National Science Foundation Grants GZ 1508 and GB 16161.     

Community metabolism of intertidal flats in the Ems-Dollard estuary

To obtain an insight into the flux of carbon through intertidal sediments of the Ems-Dollard estuary, the annual cycles of gross benthic primary production and community respiration were measured at six stations, together with a set of environmental parameters. In a stepwise multiple regression analysis it was shown that temperature alone and temperature plus viable bacteria explained 50 and 70% respectively of the observed variation in community respiration. Other variables, including the rate of primary production and amount of organic carbon in the sediment were less important. The rate of primary production could not be fitted adequately into a multiple regression equation. The annual values of community respiration (177–794 gO₂·m^-2·yr^-1) and primary production (82–628 gO₂·m^-2·yr^-1) were within the range of published values. except for one station in the vicinity of a wastewater outfall, which had an extreme production (average 984 gO₂·m^-2·yr^-1). At four stations, annual community respiration exceeded primary production by 40%. It is concluded that the main carbon flux within the sediment, from CO₂ to benthic primary producers, to benthic consumers and from there to CO₂ again,was completed within a month or so, leaving untouched the large bulk of organic matter within the sediment. Possible effects of wastewater discharges on community metabolism are discussed.Publication No. 43 of the project Biological Research in the Ems-Dollard Estuary     

Metabolism of two dominant epibenthic echinoderms measured at bathyal depths in the Santa Catalina Basin

Metabolism of two abundant echinoderm species constituting 99.6% of the epibenthic megafauna in the Santa Catalina Basin, off southern California, USA was measured at 1 300 m during the 1979 “Bathyal Expedition”. Specimens of the ophiuroid Ophiophthalmus normani and the holothurian Scotoplanes globosa, collected by the submersible “Alvin”, were individually placed in respirometers, and measured in situ for O₂ consumption and ammonium excretion rates. For O. normani, weight-specific O₂ consumption rates decreased with increasing weight and were of comparable magnitude to rates of deep-sea and shallow-water ophiuroids; excretion rates were highly variable. Population O₂ consumption and excretion rates for O. normani (estimated from size-frequency distribution, abundance, and rate regression equations) were 1 129.28 μl O₂ m^-2 h^-1 and 27.30 nmol NH ₄ ⁺ m^-2 h^-1. Weight-specific O₂ consumption and ammonium excretion rates of S. globosa decreased with increasing weight and were of comparable magnitude to rases of shallow-water holothurians. Population O₂ constimption and excretion rates of S. globosa were 1.38 μl O₂ m^-2 h^-1 and 4.86 nmol NH ₄ ⁺ m^-2 h^-1. Combined population O₂ consumption rates for O. normani and S. globosa are of comparable magnitude to that of the sediment community and plankton in the benthic boundary layer (sediment and overlying 50 m water column) of the Santa Catalina Basin.     

Seasonal variability of intertidal bacterial metabolism and growth efficiency in an exposed sandy beach during low tide

Benthic gross primary production (GPP) and community respiration (BCR) were regularly measured on sandy beach sediment during low tide in a megatidal ecosystem. These measurements were assessed during 2 years in situ within a benthic chamber simultaneously with bacterial production (BP). Results suggested that community respiration in Wimereux sandy beach sediments was probably dominated by bacterial respiration and that the estimated benthic bacterial growth efficiency (BGE) was highly variable. Although temperature significantly controlled both BP and BCR during low tide at the annual scale, the temperature effect on BGE was not significant. The instability and sediment erosion caused by the wave action and the tidal cycle were thus thought to influence the BGE. Since the sampling site is regularly affected by Phaeocystis foam deposit (enhancing the BCR and decreasing the BGE), and since GPP rates were highly variable and supported by high assimilation numbers (i.e., >1 mgC mgChla ⁻¹ h⁻¹), phytoplankton organic matter deposit following the immersion of the study site was thought to explain the BGE variability.     

Nutrient cycling between the water column and a marine sediment. I. Organic carbon

The carbon flow through the sediments at a station located in 18.3 m of water off the Scripps Institution of Oceanography, San Diego, California (USA) was determined. The parameters studied [and their mean rates of input (+) or output (-) to the benthos] were macro-detritus (+0.028 gC m^-2day^-1), fallout of particulate debris (+3.3 gC m^-2day^-1), benthic net photosynthesis during the day (-0.06 gC m^-2 daylight period^-1), burial (0 gC m^-2day^-1), benthic respiration at night (-0.28 gC m^-2 night period^-1), and resuspension (-3.0 gC m^-2day^-1). Resuspension of sediment at this station was found to have a controlling effect on the sediment organic carbon content. Benthic photosynthesis was able to provide 79% of the organic carbon required by the benthos for respiration during the daylight hours. A carbon-flow diagram linking together all of the above measurements is presented.     

Oxygen consumption of pelagic juveniles and demersal adults of the deep-sea fish Sebastolobus altivelis,measured at depth

Oxygen consumption rates of the deep-sea fish Sebastolobus altivelis were measured in situ on pelagic juveniles at mesopelagic depths (608 m) and on demersal adults at bathyal depths (1 300 m) in the Santa Catalina Basin in March 1982. Two pelagic juveniles were individually collected, and respiration was measured continuously for approximately 2 d with a slurp gun respirometer manipulated from the submersible “Alvin”. Oxygen consumption rates of these juveniles were highly variable and were 1.5 to 1.8 times higher during the night than during the day. Gut contents of the juveniles were mainly euphausiids (Euphausia pacifica and Nematoscelis difficilis). Four demersal adults were collected by “Alvin” and individually placed in fish-trap respirometers on the bottom where respiration was measured continuously for approximately 1 d. Weight-specific O₂ consumption rates for adults decreased with increasing body weight and were consistent in magnitude throughout the incubation period. Population O₂ consumption for demersal S. altivelis (calculated from abundance, size-frequency distribution, and O₂ consumption regression equation) was 11.01 μl O₂ m^-2 h^-1, which is two orders of magnitude less than the O₂ consumption rate for the population of the most abundant epibenthic megafaunal species in the Santa Catalina Basin, the ophiuroid Ophiophthalmus normani. O. normani is a principal prey for adults of S. altivelis based on gutcontent analysis. Given the population O₂ consumption rate as an estimate of food energy demand, the demersal population of S. altivelis would assimilate only 0.007% of the standing crop of O. normani per day.     

Nutrient regeneration in shallow-water sediments of the estuarine plume region of the nearshore Georgia Bight,USA

Benthic community respiration and the cycling of N and P were seasonally investigated in the unprotected, sandy sediments (Z5m) of the nearshore zone of the Georgia Bight, USA in 1981 and 1982. Nutrient exchange across the sediment-water interface was calculated from a diffusive model, measured by in-situ enclosure experiments and estimated from whole core incubations. Seasonally changing pore water profiles indicated that the sediments were not in steady-state with respect to N and P and showed the characteristics of enhanced interstitial water movement by benthic animals. Over an annual period the total flux of nitrogen measured in situ averaged 1812 mol m^-2 d^-1 from the sediments. NH ₄ ⁺ flux accounted for the vast majority of the total directly measured N flux (77%), followed by nitrate + nitrite (14%), and dissolved organic nitrogen (9%). Phosphorus flux averaged 537 mol m^-2 d^-1. A large ratio of in-situ fluxes to calculated diffusive fluxes (5.2:1) indicated flux enhancement due to benthic animal activity. ammonium fluxes measured in situ did not agree well with the rate of NH ₄ ⁺ produced in incubated whole cores (11.7 mmol m^-2 d^-1). Relative rates of C, N and P release throughout the year fluctuated considerably. Generally, nutrient fluxes were not simply related to respiration or temperature. As respiration was highly correlated with temperature, however, this suggested that respiration-regeneration was temporarily decoupled from exchange across the sediment-water interface. The annual C-N-P flux stoichiometry was 130:3.1:1. Using the rate at which NH ₄ ⁺ was produced in incubated cores the stoichiometry was 120:21:1. The anomalously low N flux measured in situ was attributed to a combination of denitrification and wave-and current-induced sediment nutrient flushing. The potential for sediment flushing is high as experiments showed that sediments were fluidized or resuspended down to 25 cm during large storms. Benthic nutrient flux contributed 40% to the annual P but only 11% to the annual N requirements of the pelagic primary producers.This is Contribution No. 558 from the University of Georgia Marine Institute. This work was supported by the Georgia Sea Grant College Program maintained by the National Oceanic and Atmospheric Administration, US Department of Commerce, under Grant No. NA80AA-D-00091     

Shallow-water benthic and pelagic metabolism:

Pelagic primary production and benthic and pelagic aerobic metabolism were measured monthly at one site in the estuarine plume region of the nearshore continental shelf in the Georgia Bight. Benthic and water-column oxygen uptake were routinely measured and supplemented with seasonal measures of total carbon dioxide flux. Average respiratory quotients were 1.18:1 and 1.02:1 for the benthos and water column, respectively. Benthic oxygen uptake ranged from 1.23 to 3.41 g O₂ m^-2 d^-1 and totalled 756 g O₂ m^-2 over an annual period. Water column respiration accounted for 60% of total system metabolism. Turnover rates of organic carbon in sediment and the water column were 0.09 to 0.18 yr^-1 and 6.2 yr^-1, respectively. Resuspension appeared to control the relative amounts of organic carbon, as well as the sites and rates of organic matter degradation in the benthos and water column. Most of the seasonal variation in benthic and pelagic respiration could be explained primarily by temperature and secondarily by primary productivity. On an annual basis, the shelf ecosystem appeared to be heterotrophic; primary production was 73% of community metabolism, which was 749 g C m^-2 yr^-1. The timing of heterotrophic periods through the year appeared to be closely related to both river discharge and the periodicity of growth and death of marsh macrophytes in the adjacent estuary. The results of this study support the estuarine outwelling hypothesis of Odum (1968).This is Contribution No. 530 from the University of Georgia Marine Institute. This work was supported by the Georgia Sea Grant College Program maintained by the National Oceanic and Atmospheric Administration, US Department of Commerce     

Carbon-dioxide production and metabolic parameters in the ophiurid Ophiothrix fragilis

As part of the evaluation of fluxes between the water column and a rich benthic community of the Dover Strait (Eastern English Channel), laboratory measurements of oxygen consumption were carried out on a common ophiurid, Ophiothrix fragilis (Abildgaard), from February 1993 to February 1995. The mean O₂-consumption rate was evaluated at 0.31 mg O₂ g⁻¹ h⁻¹ (ash-free dry weight). Simultaneous measurements of O₂ consumption and CO₂ production using the pH-alkalinity method revealed an average respiratory quotient of 0.69 proved suitable for converting oxygen demand to carbon flux. A seasonal trend in respiration data was demonstrated by sinusoidal curves fitted to O₂-uptake and CO₂-release data as a function of time. The influence on respiration rate of two seasonal parameters (temperature and food availability) is discussed; linear regression indicated a highly significant relationship between O₂ consumption (or CO₂ production) and temperature; both O₂-consumption and CO₂-production rates decreased with starvation. The average O:N ratio was estimated at 8.46, close to the theoretical value when proteins constitute the catabolic substrate. The annual carbon respired by the O. fragilis community examined and the estimated annual primary production by phytoplankton indicate that the respiration of the O. fragilis community could supply 35% of phytoplankton carbon requirements. Received: 1 August 1996 / Accepted: 4 September 1996     

Diurnal variation of nitrogen cycling in coastal,marine sediments

A closed chamber technique was developed to determine the emission of microbially produced N₂O from an estuarine sediment. A diurnal variation was observed; maximum emissions of 0.4 to 4.0 mol N₂O–N m^-2 h^-1 were recorded at night whereas the rates were low or even negative, -0.4 to 0.4 mol N₂O–N m^-2 h^-1, during the day. The bacterial denitrification located in the uppermost centimeter was apparently the major source of the emitted N₂O. The diurnal emission pattern was thus inversely related to the O₂ availability at the sediment surface; in the dark, the lack of O₂ production by benthic photosynthesis allowed the denitrification to occur closer to the sediment-water interface and was likely to enhance the release of N₂O to the water. The daily averages for the emission were about 40 mol N₂O–N m^-2 d^-1 for three investigation periods in autumn (November), winter (February) and spring (April), whereas no significant emission was recorded in the NO ₃ ^- -depleted sediment in early summer (June). In this estuary, the N₂O emissions from the sediment were significant contributions to the overall release of N₂O to the atmosphere.     

Total,chemical and biological oxygen consumption of the sediments in Lindåspollence,Western Norway

Measurements of total, chemical and biological oxygen consumption were made at 5 stations situated between 22 and 35 m in Lindåspollene, Norway. The results from each station did not reveal any clear seasonal variation, but the pooled data showed highest values in September, and lowest in January. Problems concerning interpretion of results of biological and chemical O₂ consumption obtained by a poisoning technique (using formaldehyde) are discussed. The time-weighted mean of the annual total O₂ consumption based on all stations was 10.67 ml m^-2 h^-1 or 92.2 l m^-2 year^-1. This corresponds to a consumption of 34.5g C m^-2 year^-1 (respiratory quotient=0.7), or 34 to 37% of the net annual primary production of phytoplankton.     

Effects of municipal piers on the growth of juvenile fishes in the Hudson River estuary: a study across a pier edge

The growth rates of two fish species, the winter flounder Pseudopleuronectes americanus (Walbaum) (19.3 to 42.6 mm total length, TL) and the tautog Tautogaonitis (Linnaeus) (23.9 to 55.9 mm TL), were used to evaluate habitat quality under and around municipal piers in the Hudson River estuary, USA. Growth rates were measured in a series of 10 d field caging-experiments conducted at two large piers in the summers of 1996 and 1997. Cages (0.64 m²) were deployed along␣transects that stretched from underneath the piers to beyond them, encompassing the pier edge (the transitional zone between the pier interior and the outside). Growth in weight (G _w ) was determined at five locations along the transect, 40 m beneath the pier, 20 m beneath the pier, at the pier edge, 20 m beyond the pier edge, and 40 m beyond. Under piers, mean growth rates of winter flounder and tautogs were negative (xˉG _W = −0.02 d⁻¹), and rates were comparable to laboratory-starved control fishes (xˉG _W = −0.02 d⁻¹). In contrast, mean growth rates at pier edges and in open waters beyond piers were generally positive (xˉG _W ranged from −0.001 to +0.05 d⁻¹), with growth at pier edges often being more variable and less rapid than at open-water sites. Analyses of stomach contents upon retrieval of caged fishes revealed that dry weights of food were generally higher among fishes caged at open-water stations (xˉ range = 0.02 to 0.72 mg dry wt) than at pier-edge (xˉ range = 0.01 to 0.54 mg) or under-pier (xˉ range = 0.03 to 0.11 mg) stations, although it was apparent that benthic prey were available at all stations on the transect. Our results indicate poor feeding conditions among fishes caged under piers, and suboptimal foraging among fishes caged at pier edges. Inadequate growth rates can lead to higher rates of mortality, and, based on these and other earlier experiments, we conclude that under-pier environments are poor-quality habitats for some species of juvenile fishes. Received: 12 March 1998 / Accepted: 9 November 1998     

Relationship between depth, sediment, latitude, and the structure of benthic infaunal assemblages on the mainland shelf of southern California

A regional benthic survey was conducted in 1994, and the data were used to assess the relationship among three habitat factors (depth, sediment grain size, and latitude) and the distribution of benthic infaunal assemblages on the southern California coastal shelf. Benthic samples were collected with a 0.1 m² Van Veen grab from 251 sites on the continental shelf (10–200 m deep) from Point Conception, California, to the United States–Mexico international border. The relationship between habitat and assemblages was investigated by conducting a Q-mode cluster analysis to define groups of stations with similar species composition and then examining whether differences were present in physical habitat attributes among those groups of stations. Analysis of data from 175 uncontaminated sites yielded four habitat-related benthic infaunal assemblages along the southern California coastal shelf: a shallow-water assemblage from 10–32 m, a mid-depth assemblage between 32 and 115 m, and two deep-water (115–200 m) assemblages, one in fine and one in coarse sediments. These empirically defined points in the depth and sediment grain size gradients can be used to define reference habitats for the development of biocriteria. Benthic abundance and diversity were greatest in the mid-depth assemblage, conforming to predictions for benthic assemblages in regions of upwelling. Within the 500 km of coastline examined, latitude was not an important factor in defining assemblages. Received: 3 December 1999 / Accepted: 9 October 2000     

Animal-sediment relations in Cape Cod Bay,Massachusetts I. A transect study

Benthic macrofauna and bottom sediments were sampled at 7 stations along a 24 km long onshore-offshore transect ranging in depth from 12 to 42 m in Cape Cod Bay, Massachusetts, USA. High faunal density, biomass and species diversity were recorded at stations densely populated by tubicolous polychaetes. These tube mats bind and stabilize the substratum, providing solid surfaces for attachment of epizoans. Three suspension-feeding species, Euchone incolor (polychaete), Thyasira gouldi (bivalve) and Aeginina longicornis (amphipod), co-occur with deposit-feeding species on muds resuspended by tidal currents. Hydrographic profiles of temperature, salinity and turbidity indicate that resuspended silt-clay particles are entrapped in dense water below the summer thermocline, which persists from mid-April to mid-October. The zone of intersection of the thermocline with the sea floor in about 22 m of water defines a major biofacies-lithofacies transition. This ecotone is characterized by high faunal density, biomass, and species diversity. Benthic populations of macrofauna from Cape Cod Bay are larger than those from Buzzards Bay, Massachusetts, and have a widely different taxonomic and trophic composition.Contribution No. 235 of the Systematics-Ecology Program, Marine Biological Laboratory, Woods Hole, Massachusetts, USA.     

Microplankton population structure in Southern California nearshore waters in late spring

Taxonomic composition, biomass as organic carbon, numerical abundance, and size distribution of the microplankton were determined at 6 Southern California nearshore locations in late May–early June, 1970. Samples were taken at approximately 5 m (10 m at one station) intervals through the upper 40 to 50 m to reveal some of the small-scale differences and levels of variability in the populations. Total microplankton biomass over all euphotic zone samples varied by more than two orders of magnitude (7.6 to 1,200 g C l^-1). Average biomass at comparable sites (n=5) ranged from 48 to 240 g C l^-1; biomass range within stations varied from about 5-fold to 120-fold. Total microplankton numbers varied approximately 22-fold (4.3×10⁵ to 9.5×10⁶ organisms l^-1) over all euphotic zone samples, but the range within stations was always less than an order of magnitude. At comparable stations, nanoplankton biomass had ranges extending from 3.7-fold to 12-fold; its average percentage contribution (±1 SD) to the total microplankton biomass varied from 39±5% to 54±13%. Netplankton biomass showed a similar minimal range, but its greatest range was more than two orders of magnitude. Ranges of abundance of major taxonomic groups within stations varied considerably from about 2-fold to more than three orders of magnitude. The small-scale variability of the populations probably affects the reliability of the microplankton as a food source for pelagic consumers.     

Phytoplankton in the Weddell Sea,Antarctica: composition,abundance and distribution in water-column assemblages of the marginal ice-edge zone during austral autumn

At the compacted, north-south line of the ice edge, phytoplankton were sampled during early austral autumn of 1986 in the northwestern Weddell Sea. Cells from discrete water bottle samples from 12 stations on two east-west transects were counted to gain quantitative information on the composition, abundance, distribution, and condition of the phytoplankton in water-column assemblages. Over 70 species were found. The highest numbers of total cells (integrated through the top 150 m) were found in open water, well-separated from and to the east of the ice edge on the southern transect, with 6.01×10¹⁰ cells m^-2. The relative abundance of diatoms was low at ice-convered stations (< 35% of the total phytoplankton in preserved samples) and high at open-water stations (> 80%); however, the relative abundance of the prymnesiophyte Phaeocystis sp. was high at ice-covered stations (> 60%) and low at open-water stations (< 16%), with lower absolute abundances than during a previous austral-spring phytoplankton increase. In the open ocean, the dominants were the pennate diatoms Fragilariopsis cylindrus, Pseudonitzschia prolongatoides, F. curta, and a small form of the centric diatom Chaetoceros dichaeta in chains. Although the three pennate diatoms were frequently dominant in number, they represented less biomass than C. dichaeta in open waters. Mean phytoplankton abundance was low (0.2×10⁶ cells l^-1) but, overall, the diatom cell density (0.14×10⁶ cells l^-1) was similar to that found previously during a northward transect from ice-covered to ice-free water at the Weddell-Scotia Sea ice edge (spring 1983). The phytoplankton spatial patterns in the two autumn transects differed, with the more southerly transect exhibiting a higher abundance of diatoms and dinoflagellates. The ratio of full to empty diatoms was higher on the southern transect, indicating a healthy population, while lower ratios of full/empty frustules on the northern transect suggested a generally declining population. However, Phaeocystis sp. was more abundant on the northern transect.     

The influence of macrofauna on estuarine benthic community metabolism: a microcosm study

Effects of benthic macrofauna (Corophium volutator, Hydrobia sp., Nereis virens) on benthic community metabolism were studied over a 65-d period in microcosms kept in either light/dark cycle (L/D-system) or in continuous darkness (D-system). Sediment and animals were collected in January 1986 in the shallow mesohaline estuary, Norsminde Fjord, Denmark. The primary production in the L/D-system after 10 d acted as a stabilizing agent on the O₂ and CO₂ flux rates, whereas the D-system showed decreasing O₂ and CO₂ flux throughout the period. Mean O₂ uptake over the experimental period ranged from 0.38 to 1.24 mmol m^–2 h^–1 and CO₂ release varied from 0.80 to 1.63 mmol m^–2 h^–1 in both systems. The presence of macrofauna stimulated community respiration rates measured in darknes, 1.4 to 3.0 and 0.9 to 2.0 times for O₂ and CO₂, respectively. In contrast, macrofauna lowered primary production. Gross primary production varied from 1.06 to 2.26 mmol O₂ m^–2 h^–1 and from 1.26 to 2.62 mmol CO₂ m^–2 h^–1. The community respiratory quotient (CRQ, CO₂/O₂) was generally higher in the begining of the experiment (0–20 d, mean 1.89) than in the period from Days 20 to 65 (mean 1.38). The L/D-system exhibited lower CRQ (ca. 1) than the D-system. The community photosynthetic quotient varied for both net and gross primary production from 0.64 to 1.03, mean 0.81. The heterotrophic D-system revealed a sharp decrease in the sediment content of chlorophyll a as compared to the initial content. In the autotrophic L/D-system, a significant increase in chlorophyll a concentration was observed in cores lacking animals and cores with C. volutator (The latter species died during the experiment). Due to grazing and other macrofauna activities other cores of the L/D-system exhibited no significant change in chlorophyll a concentration. Community primary production was linearly correlated to the chlorophyll a content in the 0 to 0.5 cm layer. Fluxes of DIN (NH₄ ⁺+NO₂ ^–+NO₃ ^–) did not reveal significant temporal changes during the experiment. Highest rates were found for the cores containing animals, mainly because of an increased NH₄ ⁺ flux. The release of DIN decreased significantly due to uptake by benthic microalgae in the L/D-system. No effects of the added macrofauna were found on particulate organic carbon (POC), particulate organic nitrogen (PON), total carbon dioxide (TCO₂) and NH₄ ⁺ in the sediment. The ratio between POC and PON was nearly constant (9.69) in all sediment dephts. The relationship between TCO₂ and NH₄ ⁺ was more complex, with ratios below 2 cm depth similar to those for POC/PON, but with low ratios (3.46) at the sediment surface.     

The annual cycle of heterotrophic planktonic ciliates in the waters surrounding the Isles of Shoals,Gulf of Maine: an assessment of their trophic role

Macrofauna living on subtidal rocks reefs in southern California excrete ammonium, a potentially important nutrient for benthic algae. Ammonium excretion rates of eleven macroinvertebrate and five fish taxa were determined from a total of 324 in situ incubations conducted between October 1984 and August 1985 at 14 to 17 m depths off Santa Catalina Island, California. Total ammonium excretion ranged from over 100 mol h^-1 by the kelp bass Paralabrax clathratus to less than 0.1 mol h^-1 by the gastropod Conus californicus. Weight-specific ammonium excretion generally ranged from 0.5 to 4 mol g^-1 h^-1 in invertebrates and from 3 to 7 mol g^-1 h^-1 in fishes. Intraspecific excretion rates varied substantially. Coefficient of variation of excretion rates were higher than reported for laboratory studies and multiple regression indicated that 50 to 90% of the variation in ammonium excretion rates of five species studied in detail could not be explained by the combined variation in dry weight, water temperature, time of day, and incubation dates. The excretion data, along with estimates of population densities and size-frequency distributions, indicate that benthic macrofauna release a total of 25 to 30 mol NH ₄ ⁺ m^-2 h^-1 both day and night. The species that generally make the largest contributions are a gobiid fish (Lythrypnus dalli), followed by three gastropods (Astraea undosa, Tegula eiseni, and T. aureotincta) and a sea urchin (Centrostephanus coronatus). The amount of ammonium excreted by these macrofauna on rocky reefs is insignificant compared to our previously published data on the nighttime excretion of blacksmith (Chromis punctipinnis), a pomacentrid fish that feeds in the water column during the day and shelters on the reef at night. Including blacksmiths, we estimate that the amount released by rocky-reef macrofauna at night is >280 mol m^-2 h^-1, a rate that is similar to that for many other marine communities. Additional studies are required to determine if benthic algae utilize ammonium released by these macrofauna, especially at night.Contribution No. 58 of the Ocean Studies Institute; Contribution No. 123 of the Catalina Marine Science Center     

Diffusive boundary layers and photosynthesis of the epilithic algal community of coral reefs

The effects of mass transfer resistance due to the presence of a diffusive boundary layer on the photosynthesis of the epilithic algal community (EAC) of a coral reef were studied. Photosynthesis and respiration of the EAC of dead coral surfaces were investigated for samples from two locations: the Gulf of Aqaba, Eilat (Israel), and One Tree Reef on the Great Barrier Reef (Australia). Microsensors were used to measure O₂ and pH at the EAC surface and above. Oxygen profiles in the light and dark indicated a diffusive boundary layer (DBL) thickness of 180–590 μm under moderate flow (~0.08 m s^?1) and >2,000 μm under quasi-stagnant conditions. Under light saturation the oxygen concentration at the EAC surface rose within a few minutes to 200–550% air saturation levels under moderate flow and to 600–700% under quasi-stagnant conditions. High maximal rates of net photosynthesis of 8–25 mmol O₂ m^?2 h^?1 were calculated from measured O₂ concentration gradients, and dark respiration was 1.3–3.3 mmol O₂ m^?2 h^?1. From light–dark shifts, the maximal rates of gross photosynthesis at the EAC surface were calculated to be 16.5 nmol O₂ cm^?3 s^?1. Irradiance at the onset of saturation of photosynthesis, E _k, was <100 µmol photons m^?2 s^?1, indicating that the EAC is a shade-adapted community. The pH increased from 8.2 in the bulk seawater to 8.9 at the EAC surface, suggesting that very little carbon in the form of CO₂ occurs at the EAC surface. Thus the major source of dissolved inorganic carbon (DIC) must be in the form of HCO₃ ^?. Estimates of DIC fluxes across the DBL indicate that, throughout most of the daytime under in situ conditions, DIC is likely to be a major limiting factor for photosynthesis and therefore also for primary production and growth of the EAC.     

Primary productivity and the flux of dissolved organic matter in several marine environments

Primary productivity and the flux of DO¹⁴C, dissolved saccharides (DSAC) and dissolved free primary amines (DFPA) were followed in the Sargasso Sea, Caribbean and upwelling waters of Peru. Average carbon fixation rates were 42.8, 292.8 and 4791.6 mg C m^-2 d^-1, respectively, with nocturnal respiration rates ranging from 9.8–16.3% of gross photosynthesis for the 3 areas. The release of DO¹⁴C, as a percentage of the total carbon fixed in photosynthesis, was non-detectable in the Sargasso Sea, and 3.2 and 4.4% for the Caribbean and Peruvian phytoplankton communities. Few significant changes in DSAC concentrations were recorded over a 36-h incubation period in the Sargasso Sea and Caribbean stations, whereas light-dependent accumulations of DSAC and DFPA were noted in Peruvian stations which were strongly correlated with total phytoplankton productivity. In the Peruvian stations, the average accumulation rate was 234 mg DSAC-C m^-2h^-1 while the average rate of nocturnal decomposition was 141 mg DSAC-C m^-2h^-1; diurnal and nocturnal rates of DFPA accumulation and decomposition were similar (2 mg DFPA-C m^-2h^-1). These data were used to calculate bacterial production in the upwelling waters of Peru. A general discussion of ¹⁴C-technique and routine analytical techniques for DSAC analysis is presented, as DSAC flux exceeded DO¹⁴C flux by 17-fold in coastal Peruvian stations.