Origins and scales of hypoxia on the Louisiana shelf: Importance of seasonal plankton dynamics and river nutrients and discharge

Management plans for the Mississippi River Basin call for reductions in nutrient concentrations up to 40% or more to reduce hypoxia in the Gulf of Mexico (GOM), while at the same time the government is considering new farm subsidies to promote development of biofuels from corn. Thus there are possibilities of both increasing and decreasing river nutrients depending on national priorities. River flow rates which also influence the extent of hypoxia on the shelf may be altered by global climate change. We have therefore developed a series of simulations to forecast ecosystem response to alterations in nutrient loading and river flow. We simulate ecosystem response and hypoxia events using a linked model consisting of multiple phytoplankton groups competing for nitrogen, phosphorus and light, zooplankton grazing that is influenced by prey edibility and stoichiometry, sub-pycnocline water-column metabolism that is influenced by sinking fecal pellets and algal cells, and multi-element sediment diagenesis. This model formulation depicts four areas of increasing salinity moving westward away from the Mississippi River point of discharge, where the surface mixed layer, four bottom layers and underlying sediments are represented in each area. The model supports the contention that a 40% decrease in river nutrient will substantially reduce the duration and areal extent of hypoxia on the shelf. But it also suggests that in low and middle salinity areas the hypoxia response is saturated with respect to nutrients, and that in high salinity regions small increases in nutrient and river flow will have disproportionally large effects on GOM hypoxia. The model simulations also suggest that river discharge is a stronger factor influencing hypoxia than river nutrients in the Mississippi River plume. Finally, the model simulations suggest that primary production in the low salinity regions is light limited while primary production in the higher salinity zones is phosphate limited during the May to October period when hypoxia is prevalent in the Mississippi River plume.     

Estimating river flow effects on water ages by hydrodynamic modeling in Little Manatee River estuary, Florida, USA

The water age in a tidal river in Florida, Little Manatee River, has been investigated in this study by the application of a three-dimensional hydrodynamic model. In response to a pulse dye release in the upper end of the river boundary, the hydrodynamic model determines the water age for a given location by recording the time for the dye to reach the given river location. The hydrodynamic model uses horizontal curvilinear orthogonal grids to represent the complex river system that includes several bayous and tributaries. The model has was calibrated and verified in previous study by using two continuous data sets for a 6 month period. Satisfactory model verifications indicate that the hydrodynamic model is capable of quantifying the mixing and transport process for calculating the water age in the tidal river. For 17 freshwater inflow scenarios in the Little Manatee River, the hydrodynamic model was applied to simulate water ages along the main channel of the river at 2-km interval. Flow rates in the 17 scenarios varying from 0.26 to 76.56 m³/s cover the range of the observed flows in the Little Manatee River. Water ages from model predictions range from the minimum 1.2 days under the maximum 76.56 m³/s inflow condition to the 50 days under the minimum 0.26 m³/s inflow condition. Empirical regression equations at three selected stations, with the correlation coefficient R² above 0.96, were derived from numerical model simulations to correlate water ages to freshwater inflows. The empirical water-age equation derived from hydrodynamic model simulations can be used to provide quick and low-cost estimations of water ages in response to various inflow scenarios for studying physical–chemical and biological processes in the river.     

Stormwater runoff pollution loads from an urban catchment with rainy climate in China

An older urban district in Wuhan, China, is transitioning from discharging sewage and stormwater directly into lakes, to directing the sewage to wastewater treatment plants (WWTPs). Dealing with polluted stormwater discharge is a great challenge. Stormwater runoff from an urban catchment with a combined sewer system was sampled and analyzed over a three-year period. Results indicate that wet weather flows account for 66%, 31%, 17%, and 13% of the total load of suspended solids (SS), chemical oxygen demand (COD), total nitrogen, and total phosphorus, respectively. The first flush of COD and SS was significant in all runoff events. More than 50% of the SS and COD loads were transported by the first 30% of runoff volume. Storage and treatment of the first 10 mm from each combined sewer overflow event could reduce more than 70% of the annual COD overflow load. An integrated solution is recommended, consisting of a tank connected to the WWTP and a detention pond, to store and treat the combined sewer overflow (CSO). These results may be helpful in mitigating CSO pollution for many other urban areas in China and other developing countries.     

Field estimates of growth and mortality of juvenile banana prawns (Penaeus merguiensis)

Postlarval and juvenile Penaeus merguiensis de Man from the Embley River estuary on the north-eastern Gulf of Carpentaria were sampled every 2 wk from September 1986 until August 1989, using a small beam trawl. Settlement of planktonic postlarvae peaked during the pre-wet season (October to December), and declined through the wet season (January to March). Using length-frequency analysis between 12 and 14 cohorts of juvenile prawns were identified each year. Length-frequency analysis and modal progression were used to derive growth rates during the estuarine phase of the life cycle. Growth rates, which could be described by a linear model, ranged from 0.63 to 1.65 mm CL (carapace length) wk^-1. Growth rates were positively influenced by water temperature and negatively influenced by prawn density. Salinity had no effect on growth rates. Prawns spent between 6 and 20 wk in the Embley River before emigrating offshore from the estuary. Weekly instantaneous rates of natural mortality (M) ranged from 0.23 to 0.94, and in general were lowest during the dry season (July to September) and highest during the pre-wet and wet seasons. Only temperature significantly influenced mortality rates, with mortality rates increasing with temperature. By projecting juvenile growth rates forward through time, we established which cohorts contributed to the offshore fishery each year. In 1987 and 1988 the April fishery consisted of prawns which had settled in the river before the end of January each year. Slow growth rates during the pre-wet season of 1988 meant that only cohorts that were settled before early December 1988 contributed to the fishery in April 1989. Whether a cohort contributes to the fishery depends on the settlement date, water temperature and prawn density.     

西安市皂河氨氮污染特征分析

通过对比西安市皂河多次水质监测结果,分析了城市小流域水环境中氨氮（NH4-N）的污染特征。结果表明：1）皂河NH4-N平均浓度在空间上的变化为上游和中游高于下游;2）枯水期24h的河流流量与NH4-N浓度负相关;3）洪水统计分析,NH4-N浓度峰均超前于流量峰;4）洪水过程中NH4-N污染物负荷主要以点源污染为主,非点...     

长江口湿沉降汞的时间分布及潜在生态危害

于2008年2月-2009年1月逐月采集长江口右岸陈行采样点的大气湿沉降样品,测试样品的总汞、溶解态汞浓度。分析结果显示,不同月份湿沉降中各形态汞的浓度变化较大,其中总汞浓度变化范围在0.09-0.45μg/L,体积加权平均值为0.22μg/L,总汞沉降通量高达199.79μg/（m2.a）,远高于其它地区,该区域的大气已经受到一定程度的汞污染。总汞、颗粒态汞月沉降量与降水量呈明显的正相关关系（除6月份）,总汞浓度与降水量在汛期（6-9月份）具有良好的负相关性,大气湿沉降汞的形态受到人为活动产生的颗粒物的影响,颗粒态汞占总汞比例变化范围在14%-89%之间,平均为62%。以地表水Ⅲ类标准0.1μg/L为评价标准,长江口湿沉降汞的潜在生态危害系数高,全年湿沉降汞平均值属于强生态危害范围。     

A model diagnostic study of age of river-borne sediment transport in the tidal York River Estuary

As nutrients and organic matters are transported preferentially in an adsorbed state and tend to bind to the sediments, sediment transport plays an important role on eutrophication processes in the estuaries. The timescale of sediment transport is of significance for studying the retention of pollutants and eutrophication processes in the estuaries. Unlike transport of dissolved substances that is mainly controlled by advection and diffusion processes, the sediment transport is significantly affected by the intermittent settling and resuspension processes. A three-dimensional model with suspended sediment transport was utilized to investigate the transport timescale of river-borne sediment in the tidal York River Estuary. The results indicate that river discharge dominantly determines the age of river-borne sediment in the estuary. High river discharge results in a low sediment age compared to that under mean flow. The intermittent effects of settling and resuspension events greatly affect the river-borne sediment age. Both settling velocity and critical shear stress are shown to be key parameters in determining the sediment transport timescale. The sediment age decreases as settling velocity and/or critical shear stress decrease, while it increases with the increase of settling velocity that prevents the sediment to be transported out of the estuary.     

Numerical analysis on the Brisbane River plume in Moreton Bay due to Queensland floods 2010–2011

During the Queensland floods in the summer of 2010–2011, a flood-driven Brisbane River plume extended into Moreton Bay, Queensland, Australia, and then seaward, travelling in a northward direction. It covered approximately 500 km $^{2}$ . This paper presents a three- dimensional hydrodynamic numerical model investigation into the behaviour of the Brisbane River plume. The model was verified by using satellite observations and field measurement data. The present study concludes that the high river discharge was the primary factor determining the plume size and its seaward extensions. A notable finding was that the plume was a bottom-trapped type rather than a buoyant type. Further, the southerly winds were found to have moderately confined the alongshore extension of the plume, and had caused the plume to mix thoroughly with the ocean water.     

Seagrass and algal beds as nursery habitats for tiger prawns (Penaeus semisulcatus and P. esculentus) in a tropical Australian estuary

We evaluated the importance of seagrass and algae to two species of tiger prawns (Penaeus semisulcatus and P. esculentus) by detailed sampling at four sites (two seagrass, two algae) in the Embley River estuary, and through sampling 26 sites in 7 adjacent estuaries at one time of year. Samples of tiger prawns were collected in the Embley River estuary with a small beam trawl at night every 2 wk from September to May for 2 yr (1990 to 1992). The two seagrass sites, which were 11 and 13 km from the river mouth, showed less seasonal variation in salinity than the two algal sites, which were 15 and 20 km from the river mouth. The algal beds at the two upstream sites almost disappeared during the wet season, but the biomass of seagrass did not change significantly between the wet and dry seasons. The grooved tiger prawn (P. semisulcatus), the main species at all sites, comprised 88% of the total tiger prawn catch over the two years. They were found at all sites during the pre-wet season, but after the onset of the wet season, they disappeared along with the algae, from the upstream sites. The brown tiger prawn (P. esculentus) was found almost exclusively (97% of the total catch) on the seagrass sites downstream. In the study of several estuaries, juvenile P. semisulcatus were caught at all 26 sites, and P. esculentus were caught in much smaller numbers, at 16 sites. Approximately equal numbers of P. semisulcatus were caught in seagrass and algal beds in the pre-wet season. Very few individuals >10 mm carapace length of either species, were caught. The results from this study highlight the importance of algal beds during the pre-wet season as nursery areas for one species of tiger prawn (P. semisulcatus).     

A simulation framework for water allocation to meet the environmental requirements of urban rivers: model development and a case study for the Liming River in Daqing City,China

In this paper, we describe the development of a simulation framework for allocating water from different sources to meet the environmental flows of an urban river. The model permits the development of a rational balance in the utilization of storm water, reclaimed water from wastewater treatment plants, and freshwater from reservoirs with consideration of the limited capacities of different water resources. It is designed to permit the full utilization of unconventional water sources for the restoration of river water quality by increasing river flow and improving water quality. To demonstrate practical use of the model, a case study is presented in which the model was used to simulate the environmental water allocation for the Liming River in Daqing City, China, based on the three water sources mentioned above. The results demonstrate that the model provides an effective approach for helping managers allocate water to satisfy the river’s environmental water requirements.     

A methodological framework for integrating computational fluid dynamics and ecological models applied to juvenile freshwater mussel dispersal in the Upper Mississippi River

Interdisciplinary research in hydraulics and ecology for river management and restoration must integrate processes that occur over a wide range of spatial and temporal scales, which presents a challenge to ecohydraulics modelers. Computational fluid dynamics (CFD) models are being more widely used to determine flow fields for ecohydraulics applications. In the Upper Mississippi River (UMR), the mussel dynamics model was developed as a tool for management and conservation of freshwater mussels (Unionidae), which are benthic organisms, imperiled in North America, that are inextricably linked with the hydraulics of river flow. We updated the juvenile dispersal component of the mussel dynamics model by using stochastic Lagrangian particle tracking in a three dimensional flow field output from CFD models of reaches in the UMR. We developed a methodological framework to integrate hydrodynamic data with the mussel dynamics model, and we demonstrate the use of the juvenile dispersal model employed within the methodological framework in two reaches of the UMR. The method was used to test the hypothesis that impoundment affects the relationship of some hydraulic parameters with juvenile settling distribution. Simulation results were consistent with this hypothesis, and the relationships of bed shear stress and Froude number with juvenile settling were altered by impoundment most likely through effects on local hydraulics. The methodological framework is robust, integrates Eulerian and Lagrangian reference frameworks, and incorporates processes over a wide range of temporal and spatial scales, from watershed scale hydrologic processes (decades), to reach scale (km) processes that occur over hours or days, and turbulent processes on spatial scales of meter to millimeter and times scales of seconds. The methods are presently being used to assess the impacts of pre- and early post-settlement processes on mussel distributions, including the effects of bed shear stress, and the sensitivity of the location of the host fish when juveniles excyst, on juvenile settling distribution.     

深圳铁岗水库水体中抗生素污染特征分析及生态风险评价

近年来水体中不断被检出的抗生素逐渐成为研究者关注的焦点。许多国家的河流、湖泊、地下水中均检出了抗生素残留。目前国内外关于抗生素污染特征的研究主要集中在河流、河口湾和污水处理厂等水环境中,对于抗生素在饮用水源地水体中的污染状况研究极少。利用高效液相色谱-串联质谱技术（HPLC-MS/MS）检测分析了5类典型抗生素在深圳铁岗饮用水源地型水库中的污染特征。结果表明,9种目标抗生素中,有8种在铁岗水库水体中被检出,浓度范围为1.1～203 ng·L^-1,其中,林肯霉素检出浓度最高,红霉素次之,阿莫西林未检出;入库支流抗生素污染程度普遍高于铁岗水库,其中大官陂河中抗生素质量浓度最高（277.0 ng·L^-1）,九围河次之（196.4 ng·L^-1）;枯水期抗生素浓度高于丰水期。采用风险商值法初步评价的结果表明,枯水期时料坑水中红霉素、大官陂河中磺胺甲噁唑和林肯霉素,以及丰水期时九围河中林肯霉素的生态风险商（RQ）均大于1,对生态环境具有高风险;风险简单叠加模型计算结果显示,枯水期时料坑水、塘头河、大官陂河以及丰水期时九围河中抗生素的联合毒性风险商（RQsum）均大于1,对生态环境可能会产生较高的风险。     

浅水流动有限体积法/Osher格式的二维水流-水质模拟

应用无结构网格有限体积法 /Osher格式的二维水流 -水质耦合数值模型 ,采用黎曼近似解计算模拟区域水量、动量及污染物输送通量。通过对长江南京八卦洲江段浓度场的模拟计算 ,其结果与遥感卫星图片确定的污染带分布相吻合 ,证实了模型的合理性和模拟能力     

Rehabilitating China's Largest Inland River

Abstract:  Wetlands are particularly important for conserving China's biodiversity but riparian wetlands in the Tarim River basin in western China have been reduced by 46% during the last 3 decades. The world's largest habitat for Populus euphratica , which is in the Tarim River basin, significantly shrank. To protect and restore the deteriorated ecosystems along the Tarim River and its associated wetlands, China's government initiated a multimillion dollar river restoration project to release water from upper dams to the dried-up lower reaches of the Tarim River starting in 2000. We monitored the responses of groundwater and vegetation to water recharge in the lower reaches of the river from 2000 to 2006 by establishing nine 1000-m-long transects perpendicular to the river at intervals of 20–45 km along the 320-km river course below the Daxihaizi Reservoir, the source of water conveyance, to Lake Taitema, the terminus of the Tarim River. Water recharges from the Daxihaizi Reservoir to the lower reaches of the Tarim River significantly increased groundwater levels and vegetation coverage at all monitoring sites along the river. The mean canopy size of the endangered plant species P. euphratica doubled after 6 years of water recharge. Some rare migrating birds returned to rest on the restored wetlands in summer along the lower reaches of the Tarim River. The biggest challenge facing decision makers, however, is to balance water allocation and water rights between agricultural and natural ecosystems in a sustainable way. A large number of inhabitants in the Tarim Basin depend on these limited water resources for a living. At the same time, the endangered ecosystems need to be protected. Given the ecological, socioeconomic, and sociopolitical realities in the Tarim Basin, adaptive water policies and strategies are needed for water allocation in these areas of limited water resources.     

Impact of drought on the ecological and chemical status of surface water and on the content of arsenic and fluoride pollutants of groundwater in the province of Salamanca (Western Spain)

The impact of drought on the ecological and chemical status of surface and groundwaters of the River Tormes (River Duero basin, northwestern Iberian Peninsula) was studied to evaluate the evolution of the quality of the river during its passage through the city of Salamanca (Spain). The Water Quality Index (WQI) of the river revealed that the drought period of 2005 did not significantly affect water chemical quality. However, during the study period differences were found in surface water ecological quality, using phytoplankton quality as AN indicator. These differences may be accentuated as a result of regulation of the River Tormes by the Santa Teresa reservoir. Arsenic and fluoride concentrations were measured in water wells, finding higher arsenic concentrations after the drought period and no correlation between the arsenic and fluoride contents. The results are useful for an overall understanding of potential impact of climate change on the ecological and chemical status of water in regional systems.     

Simulation-based optimization of in-stream structures design: rock vanes

We employ a three-dimensional coupled hydro-morphodynamic model, the Virtual Flow Simulator (VFS-Geophysics) in its Unsteady Reynolds Averaged Navier–Stokes mode closed with \(k-\omega\) model, to simulate the turbulent flow and sediment transport in large-scale sand and gravel bed waterways under prototype and live-bed conditions. The simulation results are used to carry out systematic numerical experiments to develop design guidelines for rock vane structures. The numerical model is based on the Curvilinear Immersed Boundary approach to simulate flow and sediment transport processes in arbitrarily complex rivers with embedded rock structures. Three validation test cases are conducted to examine the capability of the model in capturing turbulent flow and sediment transport in channels with mobile-bed. Transport of sediment materials is handled using the Exner equation coupled with a transport equation for suspended load. Two representative meandering rivers, with gravel and sand beds, respectively, are selected to serve as the virtual test-bed for developing design guidelines for rock vane structures. The characteristics of these rivers are selected based on available field data. Initially guided by existing design guidelines, we consider numerous arrangements of rock vane structures computationally to identify optimal structure design and placement characteristics for a given river system.     

Understanding multiple ecological responses to anthropogenic disturbance: rivers and potential flow regime change

Human-induced alteration of the natural flow regime is a major threat to freshwater ecosystems and biodiversity. The effects of hydrological alteration on the structural and functional attributes of riverine communities are expected to be multiple and complex, and they may not be described easily by a single model. Based on existing knowledge of key hydrological and ecological attributes, we explored potential effects of a flow-regulation scenario on macroinvertebrate assemblage composition and diversity in two river systems in Australia's relatively undeveloped wet-dry tropics. We used a single Bayesian belief network (BBN) to model potential changes in multiple assemblage attributes within each river type during dry and wet seasons given two flow scenarios: the current, near-natural flow condition, and flow regulation. We then used multidimensional scaling (MDS) ordination to visually summarize and compare the most probable attributes of assemblages and their environment under the different scenarios. The flow-regulation scenario provided less certainty in the ecological responses of one river type during the dry season, which reduced the ability to make predictions from the BBN outputs directly. However, visualizing the BBN results in an ordination highlighted similarities and differences between the scenarios that may have been otherwise difficult to ascertain. In particular, the MDS showed that flow regulation would reduce the seasonal differentiation in hydrology and assemblage characteristics that is expected under the current low level of development. Our approach may have wider application in understanding ecosystem responses to different river management practices and should be transferred easily to other ecosystems or biotic assemblages to provide researchers, managers, and decision makers an enhanced understanding of ecological responses to potential anthropogenic disturbance.     

Natural flow regimes, nonnative fishes, and native fish persistence in arid-land river systems

Escalating demands for water have led to substantial modifications of river systems in arid regions, which coupled with the widespread invasion of nonnative organisms, have increased the vulnerability of native aquatic species to extirpation. Whereas a number of studies have evaluated the role of modified flow regimes and nonnative species on native aquatic assemblages, few have been conducted where the compounding effects of modified flow regimes and established nonnatives do not confound interpretations, particularly at spatial and temporal scales that are relevant to conservation of species at a range-wide level. By evaluating a 19-year data set across six sites in the relatively unaltered upper Gila River basin, New Mexico, USA, we tested how natural flow regimes and presence of nonnative species affected long-term stability of native fish assemblages. Overall, we found that native fish density was greatest during a wet period at the beginning of our study and declined during a dry period near the end of the study. Nonnative fishes, particularly predators, generally responded in opposite directions to these climatic cycles. Our data suggested that chronic presence of nonnative fishes, coupled with naturally low flows reduced abundance of individual species and compromised persistence of native fish assemblages. We also found that a natural flow regime alone was unlikely to ensure persistence of native fish assemblages. Rather, active management that maintains natural flow regimes while concurrently suppressing or excluding nonnative fishes from remaining native fish strongholds is critical to conservation of native fish assemblages in a system, such as the upper Gila River drainage, with comparatively little anthropogenic modification.     

Simulations of the flow in the Mahakam river–lake–delta system,Indonesia

Large rivers often present a river–lake–delta system, with a wide range of temporal and spatial scales of the flow due to the combined effects of human activities and various natural factors, e.g., river discharge, tides, climatic variability, droughts, floods. Numerical models that allow for simulating the flow in these river–lake–delta systems are essential to study them and predict their evolution under the impact of various forcings. This is because they provide information that cannot be easily measured with sufficient temporal and spatial detail. In this study, we combine one-dimensional sectional-averaged (1D) and two-dimensional depth-averaged (2D) models, in the framework of the finite element model SLIM, to simulate the flow in the Mahakam river–lake–delta system (Indonesia). The 1D model representing the Mahakam River and four tributaries is coupled to the 2D unstructured mesh model implemented on the Mahakam Delta, the adjacent Makassar Strait, and three lakes in the central part of the river catchment. Using observations of water elevation at five stations, the bottom friction for river and tributaries, lakes, delta, and adjacent coastal zone is calibrated. Next, the model is validated using another period of observations of water elevation, flow velocity, and water discharge at various stations. Several criteria are implemented to assess the quality of the simulations, and a good agreement between simulations and observations is achieved in both calibration and validation stages. Different aspects of the flow, i.e., the division of water at two bifurcations in the delta, the effects of the lakes on the flow in the lower part of the system, the area of tidal propagation, are also quantified and discussed.     

The influence of rainfall on the distribution and abundance of the school prawn Metapenaeus macleayi in the Hunter River region (Australia)

The effects of rainfall on the distribution and abundance of Metapenaeus macleayi in the Hunter River region (Australia) were examined as part of a study of the prawn fishery and biology in this region. A marked increase in the freshwater flow into the estuary of the Hunter River enhances the seasonal seaward movement of prawns and produces an initial increase in the abundance of adults in the adjacent oceanic waters; it is suggested that the disturbance to the estuarine sediments and to the prawns' normal burrowing and respiratory activity, as a result of the increased river flow, is responsible for this pronounced emigration. This initial increase in adult abundance enhances the prawns' reproductive potential, and the heavy rainfall indirectly assists the recruitment of young to the cotuary and their growth and survival, and thereby increases prawn abundance in the following year also. Prolonged dry weather adversely affects the prawns, and usually results in a smaller population. The annual fluctuations and absence of a downward trend in the catch statistics indicate that this stock has not been overfished.