Microscale genetic differentiation in a sessile invertebrate with cloned larvae: investigating the role of polyembryony

Microscale genetic differentiation of sessile organisms can arise from restricted dispersal of sexual propagules, leading to isolation by distance, or from localised cloning. Cyclostome bryozoans offer a possible combination of both: the localised transfer of spermatozoa between mates with limited dispersal of the resulting larvae, in association with the splitting of each sexually produced embryo into many clonal copies (polyembryony). We spatially sampled 157 colonies of Crisia denticulata from subtidal rock overhangs from one shore in Devon, England at a geographic scale of ca. 0.05 to 130 m plus a further 21 colonies from Pembrokeshire, Wales as an outgroup. Analysis of molecular variance (AMOVA) revealed that the majority (67%) of genetic variation was distributed among individuals within single rock overhangs, with only 16% of variation among different overhangs within each shore and 17% of variation between the ingroup and outgroup shores. Despite local genetic variation, pairwise genetic similarity analysed by spatial autocorrelation was greatest at the smallest inter-individual distance we tested (5 cm) and remained significant and positive across generally within-overhang comparisons (<4 m). Spatial autocorrelation and AMOVA analyses both indicated that patches of C. denticulata located on different rock overhangs tended to be genetically distinct, with the switch from positive to negative autocorrelation, which is often considered to be the distance within which individuals reproduce with their close relatives or the radius of a patch, occurring at the 4–8 m distance class. Rerunning analyses with twenty data sets that only included one individual of each multilocus genotype (n = 97) or the single data set that contained just the unique genotypes (n = 67) revealed that the presence of repeat genotypes had an impact on genetic structuring (PhiPT values were reduced when shared genotypes were removed from the dataset) but that it was not great and only statistically evident at distances between individuals of 1–2 m. Comparisons to a further 20 randomisations of the data set that were performed irrespective of genotype (n = 97) suggested that this conclusion is not an artefact of reduced sample size. A resampling procedure using kinship coefficients, implemented by the software package GENCLONE gave broadly similar results but the greater statistical power allowed small but significant impacts of repeat genotypes on genetic structure to be also detected at 0.125–0.5 and 4–16 m. Although we predict that a proportion of the repeat multilocus genotypes are shared by chance, such generally within-overhang distances may represent a common distance of cloned larval dispersal. These results suggests that closely situated potential mates include a significant proportion of the available genetic diversity within a population, making it unlikely that, as previously hypothesised, the potential disadvantage of producing clonal broods through polyembryony is offset by genetic uniformity within the mating neighbourhood. We also report an error in the published primer note of Craig et al. (Mol Ecol Notes 1:281–282, 2001): loci Cd5 and Cd6 appear to be the same microsatellite. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Asymmetry in community regulation: effects of predators and productivity

Eutrophication and predator additions and extinctions are occurring in ecosystems worldwide. Although theory predicts that both will strongly alter the distribution of biomass in whole communities, empirical evidence has not been consolidated to quantitatively determine whether these theoretical predictions are generally borne out in real ecosystems. Here we analyze data from two types of trophic cascade studies, predator removals in factorial combination with fertilization and observed productivity gradients, to assess the role of top-down and bottom-up forces in structuring multi-trophic communities and compare results from these analyses to those from an extensive database of trophic cascade studies. We find that herbivore biomass declines and plant biomass increases in the presence of predators, regardless of system productivity. In contrast, while plants are increased by fertilization, this effect does not significantly increase herbivores in either the presence or absence of predators. These patterns are consistent among marine, freshwater, and terrestrial ecosystems and are largely independent of study size and duration. Thus, top-down effects of predation are transferred through more trophic levels than are bottom-up effects of eutrophication, showing strong asymmetry in the direction of control of biomass distribution in communities.     

Leaf quality, predators, and stochastic processes in the assembly of a diverse herbivore community

Ecological communities are structured by both deterministic, niche-based processes and stochastic processes such as dispersal. A pressing issue in ecology is to determine when and for which organisms each of these types of processes is important in community assembly. The roles of deterministic and stochastic processes have been studied for a variety of communities, but very few researchers have addressed their contribution to insect herbivore community structure. Insect herbivore niches are often described as largely shaped by the antagonistic pressures of predation and host plant defenses. However host plants are frequently discrete patches of habitat, and their spatial arrangement can affect herbivore dispersal patterns. We studied the roles of predation, host plant quality, and host spatial proximity for the assembly of a diverse insect herbivore community on Quercus alba (white oak) across two growing seasons. We examined abundances of feeding guilds to determine if ecologically similar species responded similarly to variation in niches. Most guilds responded similarly to leaf quality, preferring high-nitrogen, low-tannin host plants, particularly late in the growing season, while bird predation had little impact on herbivore abundance. The communities on the high-quality plants tended to be larger and, in some cases, have greater species richness. We analyzed community composition by correlating indices of community similarity with predator presence, leaf quality similarity, and host plant proximity. Birds did not affect community composition. Community similarity was significantly associated with distance between host plants and uncorrelated with leaf quality similarity. Thus although leaf quality significantly affected the total abundance of herbivores on a host plant, in some cases leading to increased species richness, dispersal limitation may weaken this relationship. The species composition of these communities may be driven by stochastic processes rather than variation in host plant characteristics or differential predation by insectivorous birds.     

High intertidal community organization on a rocky headland in Maine,USA

A mosaic patchwork of the barnacle Balanus balanoides L., the mussel Mytilus edulis L., and the alga Fucus vesiculosus L. was found in the transitional region between the mid and high intertidal zones on a rocky headland on Mount Desert Island, Maine, USA. The development of the mosaic was observed by following recruitment and survival of B. balanoides in denuded patches located at the same tidal level along a 60 m stretch of shore. Barnacle recruitment was least under canopies of F. vesiculosus and greatest in open areas kept moist at low tide by surf. Barnacle survival after settlement was least under the F. vesiculosus canopy due to the whiplash effect of the algal fronds in the surf and greatest in open areas free from competition from mussels. In open areas, early mortality was correlated with settlement density. In areas of dense settlement (60 spat cm^-2) up to 90% mortality resulted within 5 months from crowding associated with growth. In older individuals crowding produced hummocks of elongated, weakly attached barnacles which were more prone to removal by surf than uncrowded barnacles. Mussels exerted competitive dominance over barnacles for space and the presence of mussel beds prevented further barnacle recruitment. Mussels suffered extensive mortality during winter storms when surf removed dense mats of weakly attached mussels. The patchy distribution of mussels and barnacles results from irregular rock substrata producing numerous environmental patches with respect to wave exposure and drainage at low tide, and from densitydependent mortality of both mussels and barnacles which creates patches of new colonizable space within each environmental patch.     

The role of community-based organization in the promotion of disaster preparedness at the community level: a case study of a coastal town in the Kochi Prefecture of the Shikoku Region, Japan

The Japanese rural coastal areas are inherently vulnerable to typhoons and tsunamis. Their vulnerability has been further increasing recently, in part due to social factors such as the aging of society and depopulation. Following the Kobe earthquake of 1995, the Japanese government has promoted the Voluntary Disaster Preparedness Organization (VDPO) to build communities that are more sustainable and resilient to natural disasters. However, studies indicate that some VDPO activity has stagnated. The present study focuses on a rural coastal area in Japan and examines whether VDPO impacts residents’ awareness of disaster preparedness and also examines ties among the community. The study relies on a questionnaire survey. It reveals that VDPO contributes to improving both awareness of disaster preparedness and ties in the community.     

The ghosts of predators past: population cycles and the role of maternal programming under fluctuating predation risk

Maternal effects may be a major factor influencing the demography of populations. In mammals, the transmission of stress hormones between mother and offspring may play an important role in these effects. Laboratory studies have shown that stressors during pregnancy and lactation result in lifelong programming of the offspring phenotype. However, the relevance of these studies to free-living mammals is unclear. The 10-year snowshoe hare (Lepus americanus) cycle is intimately linked to fluctuating predation pressure and predation risk. The enigma of these cycles is the lack of population growth following the decline phase, when the predators have virtually all disappeared and the food supply is ample. We have shown that a predator-induced increase in maternal stress hormone levels resulted in a decline in reproduction. Here we examine population and hormone changes over a four-year period from the increase (2005) to the decline (2008). We report (1) that an index of maternal stress (fecal corticosteroid metabolite [FCM] concentrations) fluctuates in synchrony with predator density during the breeding season; (2) that maternal FCM levels are echoed in their offspring, and this occurs at a population-wide level; and (3) that higher maternal FCM levels at birth are correlated with an increased responsiveness of the hypothalamic-pituitary-adrenal (HPA) axis in their progeny. Our results show an intergenerational inheritance of stress hormones in a free-ranging population of mammals. We propose that the lack of recovery of reproductive rates during the early low phase of the hare cycle may be the result of the impacts of intergenerational, maternally inherited stress hormones caused by high predation risk during the decline phase.     

The role of habitat heterogeneity in structuring the community of intertidal free-living marine nematodes

The role of habitat complexity has been widely neglected in the study of meiofaunal community patterns. We studied the intertidal nematode community of a structurally complex macrotidal beach exhibiting contrasting microhabitats (sandbars and runnels) to understand the influence of environmental gradients and habitat heterogeneity in the community structure. We tested whether topographical complexity affected (1) the zonation pattern in terms of abundance and diversity, and (2) local diversity by promoting compartmentalization into distinct faunal groups. Our analyses revealed three major faunal assemblages along the exposure gradient associated to differences in mean grain size and chlorophyll a. Diversity patterns involved a mid-intertidal peak, consistent with the intermediate disturbance hypothesis, and another peak at the limit with the subtidal region, consistent with the transition zone. These results highlight the predominance of environmental gradients in establishing intertidal zonation. However, microhabitats differed in environmental conditions and possessed significantly distinct nematofaunal communities. Runnels featured higher levels of taxonomic and functional diversity, many unique genera, and the community differed from the assemblage at the limit to the subtidal, stressing their role as distinct microhabitats. The nematofauna of the structurally complex beach was more diverse than the one from a homogeneous beach nearby, supporting the hypothesis that structural heterogeneity promotes diversity by compartmentalization and highlighting the importance of microhabitats in the assessment of biodiversity. Contrary to previous predictions, our results indicate potentially high regional marine nematode diversity in the Upper Gulf of California.     

Exploring the role of local community perceptions in sustainability measurements

Measuring sustainability is an integral part of decision-making processes in order to promote sustainable development. The present paper focuses on sustainability indicators as these are measured on local level and explores two main issues: firstly, the subjective measurement of indicators focusing especially on social dimensions of sustainability, secondly, the incorporation of local perceptions in sustainability assessments. These two issues are explored in the Asopos River basin in Greece, an area where significant environmental degradation has been observed in the past decades and is also under financial pressure due to the ongoing national recession. A large-scale research study was conducted measuring environmental, economic and social indicators while, at a second stage, a model was developed, estimating new indicators that incorporate local communities’ perceptions on what they considered as important for their area. The results of the study reveal that the most important indicators for the sustainable development of the area, according to locals’ perceptions, are environmental quality as well as quality of life. By contrast, trust in local and central institutions and also local enterprises were not considered as important by locals. These results illustrate the importance of combining global and national scale assessment with locally focused social measurements of sustainability in order to better understand what is important for local communities prior to embarking on public policy planning.     

Dangerous liaisons disperse the Mediterranean dwarf palm: fleshy-pulp defensive role against seed predators

We chose the interaction between the Mediterranean dwarf palm (Chamaerops humilis) and its major seed disperser, the Eurasian badger (Meles meles), to evaluate the hypothesis that endozoochory is characterized by a mixture of conflicting and overlapping interests, with the capacity of being positive or negative for plant fitness. For instance, because of the potential protective role against invertebrate seed predators of C. humilis pulp, we expected that badger-ingested diaspores (i.e., seeds without pulp) would show lower survival than control seeds with the pulp attached. Conversely, due to the possible germination inhibitory function of C. humilis fruit pulp, it was also likely that badger-ingested seeds germinate in higher proportion than control seeds. We evaluated our predictions by carrying out a field sowing and monitoring it over two years. We estimated several stage-specific transition probabilities as well as the cumulative probability of seedling recruitment under different treatments. Our experimental results revealed the multifunctionality of C. humilis fruit pulp and that fruit ingestion by badgers had conflicting outcomes for the palm. As predicted, seed survival was much lower and seed predation by invertebrates much higher for badger-ingested than for control seeds, suggesting a defensive role of C. humilis ripe fruit pulp. All early-emerged seedlings came from badger-ingested seeds, suggesting an inhibitory function of fruit pulp. Though we did not find an effect of removal from the maternal environment on most components of fitness, seedling survival for badger-ingested seeds was higher away from than beneath conspecifics. Badgers imposed a sizeable short-term fitness cost to C. humilis and therefore could be categorized as a "dangerous liaison." Nonetheless, because of the high mobility of the badger, its dispersal service appears paramount given the severe fragmentation and isolation of most C. humilis populations across the highly humanized Mediterranean basin. Our study thus illustrates the necessity of assessing concurrently direct and indirect effects of plant-disperser interactions at different stages of the plant life cycle and recruitment process.     

The effects of opportunistic and intentional predators on the herding behavior of prey

In this article, we study how predator behavior influences the aggregation of prey into herds. Game-theoretic models of herd formation are developed based on different survival probabilities of solitary prey and prey that join the herd and on the predator's preference of what type of prey to search for. For an intentional predator that will only pursue its preferred type of prey, a single herd with no solitaries cannot emerge unless the herd acts as a prey refuge. If neither prey choice provides a refuge, it is shown that an equilibrium always exists where there are both types of prey and the predator does not always search for the same type of prey (i.e., a mixed equilibrium exists). On the other hand, if the predator is opportunistic in that it sometimes shifts to pursue the type of prey that is observed first, there may be a single herd equilibrium that does not act as a prey refuge when there is a high level of opportunistic behavior. For low opportunistic levels, a mixed equilibrium is again the only outcome. The evolutionary stability of each equilibrium is tested to see if it predicts the eventual herding behavior of prey in its corresponding model. Our analysis confirms that both predator and prey preferences (for herd or solitary) have strong effects on why prey aggregate. In particular, in our models, only the opportunistic predator can maintain all prey in a single herd that is under predation risk.     

Asexual reproduction as a means of population maintenance in the coral reef asteroid Linckia multifora on Guam

The asteroid Linckia multifora (Lamarck) reproduces by autotomy of arms. Seven phases are recognized in its asexual reproductive cycle (autotomized arms; comets; counter-comets; post counter-comet I, II and III; and disc-parents). Individuals of the comet phase represent the highest percentage for population samples collected throughout the year from several sites on Guam, indicating a continuous asexual reproduction through which populations of L. multifora are being maintained.Supported by National Science Foundation Grant GA-39948 to the University of Guam Marine Laboratory; Contribution No. 108, University of Guam Marine Laboratory. Based on a thesis submitted in partial fulfillment of the requirements for the Degree of Master of Science at the University of Guam, USA.     

The role of behavioral responses to predators in modifying urchins' (Strongylocentrotus droebachiensis) destructive grazing and seasonal foraging patterns

We documented spatial and temporal patterns of urchins (Strongylocentrotus droebachiensis) and periwinkles (Littorina littorea) in three habitats: a persistent Laminaria longicruris and L. digitata bed; an urchin dominated barrens, and the edge of the kelp bed that formed a boundary between the two. Urchins were rare in the kelp and, when present, always large and well hidden, a pattern we interpret as a response to crab and lobster predation. Urchins were abundant in the barrens, and, in the summer when predaceous fish were active during the day, foraged only at nigh. We observed the formation of a dense urchin feeding front along the kelp bed edge, and these urchins remained exposed and feeding even during the summer. Laboratory experiments demonstrated that aggregations are an effective defense against some predators, and that the presence of crabs increases the tendency of large urchins to aggregate. We hypothesize that healthy Laminaria spp. beds persist because kelp bed associated predators keep urchins at low densities and in hiding. A reduction in predation pressure permits urchin densities to increase to the point where they form aggregations, which provide better defense than hiding. These aggregations then graze destructively on Laminaria spp., forming barrens. These barrens seem to be a new, stable configuration of the system.     

Influence of velocity field on driftwood accumulation at a bridge with a single pier

Environmental Fluid Mechanics - Transport of driftwood during heavy rainfall events can intensify the flood hazard. Driftwood accumulates at a bridge and backwater rises. Accumulated logs sink...     

Heavier birds react faster to predators: individual differences in the detection of stalking and ambush predators

The relationship between body mass and reactions speed in response to a predatory threat is poorly understood. Theory predicts that different vigilance patterns are optimal for the detection of different predator types. We suggest that birds of different individual state might also differ in their speed of response dependent upon predator type. We used laboratory trials of wild caught chaffinches (Fringilla coelebs) to determine how between individual differences in chaffinch behaviour and state correlate with latency to react to a ground predator model (domestic cat), thus providing a comparison with previous work in the same model system using aerial predator models. In experiment 1, we observed chaffinch responses to a moving cat model, simulating a stalking predator. In experiment 2, we used a camouflaged cat model simulating an ambush predator. Both experiments show evidence suggesting heavier individuals (which previous literature has linked to impaired flight performance) responded more quickly to the model cat. Heavier individuals also had shorter interscan intervals. In contrast to a previous study, both experiments found individuals with a higher intake rate were not faster at responding to the cat model. In addition, individuals in experiment 1 that head turned more while scanning were slower to respond to the stalking cat model. Our work suggests that although heavier individuals may have impaired escape performance they appear to show behavioural compensation by allocating more attention to anti-predator behaviour and by modifying their interscan intervals, resulting in faster response times to a ground predator. We suggest more experiments investigating response time to different predatory types and explicitly manipulating state to elucidate cause and effect.     

Fine structure of the optic cusion in the asteroid Nepanthia belcheri

The optic cushion of Nepanthia belcheri (Perrier) is a prominent pigmented sense organ situated on the oral surface below the terminal tentacle. The distal region contains up to 170 optic cups, whilst proximally are numerous pyriform glandular cells traversed by supporting fibres. The outer margin of the optic cup is formed by alternating pigmented and photoreceptor cells. The pigmented cells contain numerous densely staining granules of scarlet pigment. The distal ends of the photoreceptors are elaborated into many long microvilli regularly arranged about a modified cilium. There is a clear circumciliary space delimiting the cilium from the microvilli.     

Additive effects of vertebrate predators on insects in a Puerto Rican coffee plantation.

A variety of studies have established the value of shaded coffee plantations as habitat for birds. While the value of birds as biological controls in coffee has received some attention, the interactions between birds and other predators of insects have not been tested. We used exclosures to examine the effects of vertebrate predators on the arthropods associated with coffee, in particular the coffee leafminer (Leucoptera coffeella) and the flatid planthopper Petrusa epilepsis, in a shaded coffee plantation in Puerto Rico. We used a 2 x 2 factorial design with four treatments: exclusion of birds, lizards, birds and lizards, and control (no exclusion). Abundance of insects > 5 mm increased when birds or both birds and lizards were removed. Birds and lizards had an additive effect for insects < 5 mm and for all insects combined. Coffee leafminers showed a weak response to removal of predators while planthopper abundance increased significantly in the absence of avian predators. Arthropod predators and parasitoids did not differ significantly between treatments. Our findings suggest that vertebrate insectivores have an additive effect on insects in coffee and may help control abundances of some coffee pests. Equally important, we present evidence suggesting that they do not interfere with other known natural enemies of coffee pests.     

The vertical structure of a pelagic community in the tropical ocean

The vertical structure of the ecosystem in the euphotic zone of the western Equatorial Pacific has been studied. The studies were based on a continuous sounding of the bioluminescence field, with simultaneous, vertically aimed sampling made with the aid of a 5l water bottle and plankton nets. The bioluminescence field has a two-maxima structure with a more pronounced and permanent lower maximum found in the oligotrophic regions as deep as 60 to 100 m. In the narrow (10 m) layer of maximum bioluminescence, the concentration of zooplankton, as well as the concentration, activity and production of bacteria and phytoplankton, are several times higher than those in immediately adjacent waters at greater or lesser depth. At the same time, the concentration of nutrient salts in that layer diminishes sharply and approaches zero in the overlying water. Analysis of the data obtained shows that the production processes above the lower maximum layer are dependent not only on the turbulent influx of nutrient salts from the underlying layers, but also on the horizontal supply from the zone of upwelling. A pelagic community, in its different time aspects from the moment of water ascending until its sinking in the convergence zone, is suggested as a common system for modelling.     

Assessing the effectiveness of marine reserves on unsustainably harvested long-lived sessile invertebrates

Although the rapid recovery of fishes after establishment of a marine reserve is well known, much less is known about the response of long-lived, sessile, benthic organisms to establishment of such reserves. Since antiquity, Mediterranean red coral (Corallium rubrum) has been harvested intensively for use in jewelry, and its distribution is currently smaller than its historical size throughout the Mediterranean Sea. To assess whether establishment of marine reserves is associated with a change in the size and number of red coral colonies that historically were not harvested sustainably, we analyzed temporal changes in mean colony diameter and density from 1992 to 2005 within red coral populations at different study sites in the Medes Islands Marine Reserve (established in 1992) and in adjacent unprotected areas. Moreover, we compared colony size in the Medes Islands Marine Reserve, where recreational diving is allowed and poaching has been observed after reserve establishment, with colony size in three other marine protected areas (Banyuls, Carry-le-Rouet, and Scandola) with the enforced prohibition of fishing and diving. At the end of the study, the size of red coral colonies at all sampling sites in the Medes Islands was significantly smaller than predicted by growth models and smaller than those in marine protected areas without fishing and diving. The annual number of recreational dives and the percent change in the basal diameter of red coral colonies were negatively correlated, which suggests that abrasion by divers may increase the mortality rates of the largest red coral colonies within this reserve . Our study is the first quantitative assessment of a poaching event, which was detected during our monitoring in 2002, inside the marine reserve. Poaching was associated with a loss of approximately 60% of the biomass of red coral colonies.     

Effects of municipal piers on the growth of juvenile fishes in the Hudson River estuary: a study across a pier edge

The growth rates of two fish species, the winter flounder Pseudopleuronectes americanus (Walbaum) (19.3 to 42.6 mm total length, TL) and the tautog Tautogaonitis (Linnaeus) (23.9 to 55.9 mm TL), were used to evaluate habitat quality under and around municipal piers in the Hudson River estuary, USA. Growth rates were measured in a series of 10 d field caging-experiments conducted at two large piers in the summers of 1996 and 1997. Cages (0.64 m²) were deployed along␣transects that stretched from underneath the piers to beyond them, encompassing the pier edge (the transitional zone between the pier interior and the outside). Growth in weight (G _w ) was determined at five locations along the transect, 40 m beneath the pier, 20 m beneath the pier, at the pier edge, 20 m beyond the pier edge, and 40 m beyond. Under piers, mean growth rates of winter flounder and tautogs were negative (xˉG _W = −0.02 d⁻¹), and rates were comparable to laboratory-starved control fishes (xˉG _W = −0.02 d⁻¹). In contrast, mean growth rates at pier edges and in open waters beyond piers were generally positive (xˉG _W ranged from −0.001 to +0.05 d⁻¹), with growth at pier edges often being more variable and less rapid than at open-water sites. Analyses of stomach contents upon retrieval of caged fishes revealed that dry weights of food were generally higher among fishes caged at open-water stations (xˉ range = 0.02 to 0.72 mg dry wt) than at pier-edge (xˉ range = 0.01 to 0.54 mg) or under-pier (xˉ range = 0.03 to 0.11 mg) stations, although it was apparent that benthic prey were available at all stations on the transect. Our results indicate poor feeding conditions among fishes caged under piers, and suboptimal foraging among fishes caged at pier edges. Inadequate growth rates can lead to higher rates of mortality, and, based on these and other earlier experiments, we conclude that under-pier environments are poor-quality habitats for some species of juvenile fishes. Received: 12 March 1998 / Accepted: 9 November 1998