Combined bioremediation of atrazine-contaminated soil by <Emphasis Type="Italic">Pennisetum</Emphasis> and <Emphasis Type="Italic">Arthrobacter</Emphasis> sp. strain DNS10

Strain DNS10 was isolated from the black soil collected from the northeast of China which had been cultivated with atrazine as the sole nitrogen source. Pennisetum is a common plant in Heilongjiang Province of China. The main objective of this paper was to evaluate the efficiency of plant–microbe joint interactions (Arthrobacter sp. DNS10 + Pennisetum) in atrazine degradation compared with single-strain and single-plant effects. Plant–microbe joint interactions degraded 98.10 % of the atrazine, while single strain and single plant only degraded 87.38 and 66.71 % after a 30-day experimental period, respectively. The results indicated that plant–microbe joint interactions had a better degradation effect. Meanwhile, we found that plant–microbe joint interactions showed a higher microbial diversity. The results of microbial diversity illustrated that the positive effects of cropping could improve soil microbial growth and activity. In addition, we planted atrazine-sensitive plants (soybean) in the soil after repair. The results showed that soybean growth in soil previously treated with the plant–microbe joint interactions treatment was better compared with other treatments after 20 days of growth. This was further proved that the soil is more conducive for crop cultivation. Hence, plant–microbe joint interactions are considered to be a potential tool in the remediation of atrazine-contaminated soil.     

Fate of nitrogen for subsurface drip dispersal of effluent from small wastewater systems

Subsurface drip irrigation systems apply effluent from onsite wastewater systems in a more uniform manner at a lower rate than has been possible with other effluent dispersal methods. The effluent is dispersed in a biologically active part of the soil profile for optimal treatment and where the water and nutrients can be utilized by landscape plants. Container tests were performed to determine the fate of water and nitrogen compounds applied to packed loamy sand, sandy loam, and silt loam soils. Nitrogen removal rates measured in the container tests ranged from 63 to 95% despite relatively low levels of available carbon. A Hydrus 2D vadose zone model with nitrification and denitrification rate coefficients calculated as a function of soil moisture content fit the container test results reasonably well. Model results were sensitive to the denitrification rate moisture content function. Two-phase transport parameters were needed to model the preferential flow conditions in the finer soils. Applying the model to generic soil types, the greatest nitrogen losses (30 to 70%) were predicted for medium to fine texture soils and soils with restrictive layers or capillary breaks. The slow transport with subsurface drip irrigation enhanced total nitrogen losses and plant nitrogen uptake opportunity.     

Nitrogen saturation of terrestrial ecosystems

Nitrogen saturation, in the sense that nitrogen additions to an ecosystem lead to losses of the same order of magnitude, is analyzed as an interplay between a plant subsystem and a soil subsystem. The plant system is defined by its nitrogen productivity, which allows calculations of the maximum amount of nitrogen that can be held in, and the maximum nitrogen flux density that can be utilized by, the plant subsystem. The most important response of the soil subsystem is a change in the microbial nitrogen concentration, from which the nitrogen absorption capacity can be derived. It is shown that of the two subsystems the soil must always saturate first. The time to reach saturation depends strongly on site history in terms of the sources of litter forming the soil organic matter and on the ratio between the external nitrogen inflows and the litter nitrogen flow.     

Application of plant carbon source for denitrification by constructed wetland and bioreactor: review of recent development

Water quality standard for nitrate becomes more and more strict, and the plant carbon source is widely used for denitrification by constructed wetland (CW) and bioreactor. However, the nitrate removal efficiency by different types of plant carbon source are not evaluated comprehensively. Denitrification performance of different plant carbon sources, and the influence of dosing method and pretreatment are thoroughly reviewed in this paper, which aims to investigate the accurate utilization of plant carbon source for nitrogen (as nitrate) removal. It is concluded that plant carbon source addition for all types of CWs and bioreactors can improve the nitrate removal efficiency to some extent, and the dosing method of plant carbon source for denitrification should be further studied and optimized in the future. The popular carbon sources for CW and bioreactor denitrification enhancement are woodchip, chopped macrophytes, crop plants, macrophytes litters, etc. The recommended optimum C:N ratios for CW and bioreactor are 4.0:5.0 and 1.8:3.0, respectively. The physical and biological pretreatments are selected to supply organic carbon for long-term denitrification.     

Effect of soil compaction on organic carbon amounts and distribution, South-Central Iowa

Soils on the Mormon Trail have been compacted for over 150 years. Bulk density, carbon, and nitrogen samples were taken in 5-cm increments to 20 cm. Bulk density was determined using rings of known volume; total carbon and nitrogen with a LECO CHN-600. Total above ground biomass (AGB) samples were collected by clipping vegetation within a 0.25 m2 frame and were analyzed for carbon. Statistical comparisons were made using a t-test (alpha = 0.05). Bulk density was higher in the on-trail soils from 5 to 20 cm; soil carbon and C/N ratios were higher in the off-trail soils from 10 to 20 cm. AGB and AGB carbon is significantly less on the trail. Results indicate the compacted layer on the trail alters the soil carbon pool by limiting additions of fresh organic matter to the soil, limiting vegetative production, and by "pooling" carbon additions in the upper 10 cm of the soil.     

Ammonia volatilization from crop residues and frozen green manure crops

Agricultural systems can lose substantial amounts of nitrogen (N). To protect the environment, the European Union (EU) has adopted several directives that set goals to limit N losses. National Emission Ceilings (NEC) are prescribed in the NEC directive for nitrogen oxides and ammonia. Crop residues may contribute to ammonia volatilization, but sufficient information on their contribution to the national ammonia volatilization is lacking. Experiments were carried out with the aim to assess the ammonia volatilization of crop residues left on the soil surface or incorporated into the soil under the conditions met in practice in the Netherlands during late autumn and winter.Ammonia emission from residues of broccoli, leek, sugar beet, cut grass, fodder radish (fresh and frozen) and yellow mustard (frozen) was studied during two winter seasons using volatilization chambers. Residues were either placed on top of soil or mixed with soil. Mixing residues with soil gave insignificant ammonia volatilization, whereas volatilization was 5–16 percent of the N content of residues when placed on top of soil.Ammonia volatilization started after at least 4 days. Total ammonia volatilization was related to C/N-ratio and N concentration of the plant material. After 37 days, cumulative ammonia volatilization was negligible from plant material with N concentration below 2 percent, and was 10 percent of the N content of plant material with 4 percent N. These observations can be explained by decomposition of plant material by micro-organisms. After an initial built up of the microbial population, NH₄⁺ that is not needed for their own growth is released and can easily emit as NH₃ at the soil surface.The results of the experiments were used to estimate the contribution of crop residues to ammonia volatilization in the Netherlands. Crop residues of arable crops and residues of pasture topping may contribute more than 3 million kg NH₃–N to the national ammonia volatilization of the Netherlands, being more than 3 percent of the national emissions in 2005. This contribution should therefore be considered when focusing on the national ceilings for ammonia emissions.     

Nitrogen deposition increases the acquisition of phosphorus and potassium by heather Calluna vulgaris

Increased plant productivity due to nitrogen pollution increases the strength of the global carbon sink, but is implicated in plant diversity loss. However, modelling and experimental studies have suggested that these effects are constrained by availability of other nutrients. In a survey of element concentrations in Calluna vulgaris across an N deposition gradient in the UK, shoot concentrations of N and more surprisingly phosphorus and potassium were positively correlated with N deposition; tissue N/P ratio even decreased with N deposition. Elevated P and K concentrations possibly resulted from improved acquisition due to additional enzyme production or mycorrhizal activity. Heather occurs on organic soils where nutrient limitations are likely due to availability constraints rather than small stocks. However, if this effect extends to other plant and soil types, effects of N deposition on C sinks and plant competition may not be as constrained by availability of other nutrients as previously proposed.     

Plant–bacteria partnerships for the remediation of hydrocarbon contaminated soils

Plant–bacteria partnerships have been extensively studied and applied to improve crop yield. In addition to their application in agriculture, a promising field to exploit plant–bacteria partnerships is the remediation of soil and water polluted with hydrocarbons. Application of effective plant–bacteria partnerships for the remediation of hydrocarbons depend mainly on the presence and metabolic activities of plant associated rhizo- and endophytic bacteria possessing specific genes required for the degradation of hydrocarbon pollutants. Plants and their associated bacteria interact with each other whereby plant supplies the bacteria with a special carbon source that stimulates the bacteria to degrade organic contaminants in the soil. In return, plant associated-bacteria can support their host plant to overcome contaminated-induced stress responses, and improve plant growth and development. In addition, plants further get benefits from their associated-bacteria possessing hydrocarbon-degradation potential, leading to enhanced hydrocarbon mineralization and lowering of both phytotoxicity and evapotranspiration of volatile hydrocarbons. A better understanding of plant–bacteria partnerships could be exploited to enhance the remediation of hydrocarbon contaminated soils in conjunction with sustainable production of non-food crops for biomass and biofuel production.     

Effects of long-term soil amendment with sewage sludges on soil humic acid thermal and molecular properties

Sewage sludges are frequently used as soil amendments due to their high contents of organic matter and nutrients, particularly N and P. However, their effects upon the chemistry of soil humic acids, one of the main components of the soil organic matter, need to be more deeply studied in order to understand the relation between organic matter structure and beneficial soil properties. Two sewage sludges subjected to different types of pre-treatment (composted and thermally dried) with very different chemical compositions were applied for three consecutive years to an agricultural soil under long-term field study. Thermal analysis (TG–DTG–DTA) and solid-state ¹³C NMR spectroscopy were used to compare molecular and structural properties of humic acids isolated from sewage sludges, and to determine changes in amended soils. Thermally dried sewage sludge humic acids showed an important presence of alkyl and O/N-alkyl compounds (70%) while composted sludge humic acids comprised 50% aromatic and carbonyl carbon. In spite of important differences in the initial chemical and thermal properties of the two types of sewage sludges, the chemical and thermal properties of the soil humic acids were quite similar to one another after 3 years of amendment. Long-term application of both sewage sludges resulted in 80–90% enrichment in alkyl carbon and organic nitrogen contents of the soil humic acid fraction.     

Full-scale experience for nitrogen removal from piggery waste.

The nitrogen-removal performances of three full-scale piggery wastewater treatment plants, with different organic and nitrogen loads, at the capacity ranges of 95 to 130 m3/d, were compared in this study. Plants 1 and 2 can be characterized as the modification of anoxic-aerobic operating systems, while an anaerobic and anoxic-aerobic system was used in plant 3. The influent piggery wastewater concentration for plant 1 was relatively lower, but with higher organic and nitrogen loads, resulting in higher chemical oxygen demand (COD) and ammonium-nitrogen in effluent. Plant 2 was operated with strong piggery wastewater, resulting in a higher operating temperature. The high temperature could inhibit the nitrifying activity in plant 2. Although plant 3 was operated with a higher influent total COD-to-total Kjeldahl nitrogen ratio (TCOD:TKN), an additional external carbon source was required to polish the final effluent to remove nitrogen. Influent COD in plant 3 was used in the anaerobic-anoxic reactor for both methane (CH4) production and denitrification. Based on various mass balances, including caloric, COD, and alkalinity, the key elements for the successful nitrogen removal from the piggery waste were reactor temperature (less than 35degrees C), influent TCOD:TKN (greater than 6), and alkalinity-to-TKN ratio (greater than 3).     

Influence of soil conditions on dissolved organic matter leached from forest and wetland soils: a controlled growth chamber study

This study investigated the effects of various soil conditions, including drying-rewetting, nitrogen deposition, and temperature rise, on the quantities and the composition of dissolved organic matter leached from forest and wetland soils. A set of forest and wetland soils with and without the nitrogen deposition were incubated in the growth chambers under three different temperatures. The moisture contents were kept constant, except for two-week drying intervals. Comparisons between the original and the treated samples revealed that drying-rewetting was a crucial environmental factor driving changes in the amount of dissolved organic carbon (DOC). The DOC was also notably increased by the nitrogen deposition to the dry forest soil and was affected by the temperature of the dry wetland soil. A parallel factor (PARAFAC) analysis identified three sub-fractions of the fluorescent dissolved organic matter (FDOM) from the fluorescence excitation–emission matrices (EEMs), and their compositions depended on drying-rewetting. The data as a whole, including the DOC and PARAFAC components and other optical indices, were possibly explained by the two main variables, which were closely related with the PARAFAC components and DOC based on principal component analysis (PCA). Our results suggested that the DOC and PARAFAC component information could provide a comprehensive interpretation of the changes in the soil-leached DOM in response to the different environmental conditions.     

Biological activity of soil organic matter mobilized by root exudates

In order to study the biological activity of soil organic matter mobilized by agrarian (Zea mays: cultivars Mytos and Samantha) and forest (Picea abies Karst. and Pinus sylvestris L.) root exudates, two different soils, an Eutric Cambisol (EC) and a Rendzic Leptosol (RL), were considered. Soil organic matter extracts were obtained by treating the soils with water (control) or plant root exudates. The extracts were characterized by hormone-like activities and gas chromatographic/mass spectrometric (GC/MS) measurements. Their effects on the nitrogen metabolism in maize seedlings were evaluated. The nitrogen organification in the maize seedlings has been greatly stimulated by all the organic acid extracts from the agrarian soil, while the extracts from the forest soil had no influence upon the metabolism; this indicated a probable link between the plant and the environment. The different biological activities of the extracts are discussed.     

Microbial activities in soils of a former sawmill area

To find out microbial metabolic functioning and toxicity in a former sawmill area, carbon dioxide evolution, methane oxidation potential, 10 hydrolytic enzyme activities, Vibrio fischeri test, fluorescein diacetate hydrolysis activity (FDA), soil pH, carbon, nitrogen and pentachlorophenol (PCP) content were measured at four sites. The area is contaminated with aged chlorophenols. Chlorophenol content of soil was analyzed with a novel HPLC-MS technique, which allowed to measure chlorophenols without derivatization. The sites had a pollution gradient from 0.5 to 15 microg PCP g dw of soil(-1). Endogenous carbon dioxide evolution, methane oxidation potential, butyrate-esterase, acetate-esterase, sulphatase and aminopeptidase activities were lower at the site 2 than 3, although the site 2 and 3 had similar content of carbon and nitrogen. The soil was toxic in V. fischeri test at the site 2, which had high content of PCP (3.93+/-1.00 microg PCP g dw of soil(-1)). The results indicated that endogenous carbon dioxide evolution, methane oxidation potential, butyrate-esterase, acetate-esterase, sulphatase and aminopeptidase activities were sensitive to PCP in the soil. The results indicated that alpha-glucosidase, beta-glucosidase, beta-xylosidase, beta-cellobiosidase, phosphomonoesterase, N-acetyl-glucosaminidase activity and FDA hydrolysis activity were not sensitive to PCP in the soil. Soil processes involved in the cycling of carbon, nitrogen, sulphur and phosphorus were only slightly vulnerable in the former sawmill area and most sensitive microbial species were probably replaced with more tolerant ones to maintain and recover functioning of the former sawmill soils.     

The impact of nitrogen deposition on acid grasslands in the Atlantic region of Europe

A survey of 153 acid grasslands from the Atlantic biogeographic region of Europe indicates that chronic nitrogen deposition is changing plant species composition and soil and plant-tissue chemistry. Across the deposition gradient (2-44 kg N ha⁻¹ yr⁻¹) grass richness as a proportion of total species richness increased whereas forb richness decreased. Soil C:N ratio increased, but soil extractable nitrate and ammonium concentrations did not show any relationship with nitrogen deposition. The above-ground tissue nitrogen contents of three plant species were examined: Agrostis capillaris (grass), Galium saxatile (forb) and Rhytidiadelphus squarrosus (bryophyte). The tissue nitrogen content of neither vascular plant species showed any relationship with nitrogen deposition, but there was a weak positive relationship between R. squarrosus nitrogen content and nitrogen deposition. None of the species showed strong relationships between above-ground tissue N:P or C:N and nitrogen deposition, indicating that they are not good indicators of deposition rate.     

Soil climate and decomposer activity in Sub-Saharan Africa estimated from standard weather station data: a simple climate index for soil carbon balance calculations

Soil biological activity was calculated on a daily basis, using standard meteorological data from African weather stations, a simple soil water model, and commonly used assumptions regarding the relations between temperature, soil water content, and biological activity. The activity factor r(e_clim) is calculated from daily soil moisture and temperature, thereby taking the daily interaction between temperature and moisture into account. Annual mean r(e_clim) was normalized to 1 in Central Sweden (clay loam soil, no crop), where the original calibration took place. Since soils vary in water storage capacity and plant cover will affect transpiration, we used this soil under no crop for all sites, thereby only including climate differences. The Swedish r(e_clim) value, 1, corresponds to ca. 50% annual mass loss of, e.g., cereal straw incorporated into the topsoil. African mean annual r(e_clim) values varied between 1.1 at a hot and dry site (Faya, Chad) and 4.7 at a warm and moist site (Brazzaville, Congo). Sites in Kenya ranged between r(e_clim) = 2.1 at high altitude (Matanya) and 4.1 in western Kenya (Ahero). This means that 4.1 times the Swedish C input to soil is necessary to maintain Swedish soil carbon levels in Ahero, if soil type and management are equal. Diagrams showing daily r(e_clim) dynamics are presented for all sites, and differences in within-year dynamics are discussed. A model experiment indicated that a Swedish soil in balance with respect to soil carbon would lose 41% of its soil carbon during 30 y, if moved to Ahero, Kenya. If the soil was in balance in Ahero with respect to soil carbon, and then moved to Sweden, soil carbon mass would increase by 64% in 30 y. The validity of the methodology and results is discussed, and r(e_clim) is compared with other climate indices. A simple method to produce a rough estimate of r(e_clim) is suggested.     

Initial studies for the phytostabilization of a mine tailing from the Cartagena-La Union Mining District (SE Spain)

Mine tailings are one of the main environmental problems in post-mining landscapes and their removal is often complicated due to their high heavy metal content and dimensions. In this sense, using plant species for in situ stabilization may be an interesting and low cost option. Moreover, there are some plant species that have adapted to these conditions and are usually present at these contaminated sites. In this study, a mine tailing located in South-East Spain was investigated in order to establish lines for further phytostabilization research. A plot sampling design was carried out in order to characterize the soil properties. In addition, two plant species that have naturally colonized some parts of the tailing, Hyparrhenia hirta and Zygophyllum fabago, were sampled, including the analyses of their respective rhizospheric soils. The results of plot soil samples showed pH values from ultra acid to slightly alkaline. The electrical conductivity values were around 4dSm(-1) in plots with vegetation and 8dS m(-1) in the plot without vegetation. Total metal concentrations were high (4000 mg kg(-1) for Pb, 9000-15000 mg kg(-1) for Zn). DTPA- and water-extractable Zn were 5% and 3% of the total, respectively. H. hirta accumulated around 150 mg kg(-1) Pb in both shoots and roots. Zn concentration was 750 mg kg(-1) in Z. fabago shoots. DTPA-extractable Zn and Cu were positively correlated to plant uptake.     

Variations in chemical composition of birch foliage under air pollution stress and their consequences for Eriocrania miners

The relationships between chemical composition of birch foliage, individual performance and population density of both solitary and gregarious species of Eriocrania leafminers (Lepidoptera: Eriocraniidae) were studied in the vicinity of the Harjavalta copper-nickel smelter, southwestern Finland. The contents of heavy metals (Cu, Ni, Fe and Zn) in birch foliage exponentially decreased with the distance from the factory whereas the content of manganese showed the opposite trend. Performance parameters of Eriocrania miners were correlated neither with the distance from the pollution source nor with the foliar content of heavy metals. However, larval masses of both solitary and gregarious species were highest at the zone of moderate pollution. The levels of total nitrogen and total carbon and the carbon: nitrogen ratio in birch leaves showed no clear patterns in relation to distance from the factory. Feeding efficiency of solitary larvae increased with higher foliar nitrogen content but decreased when the carbon: nitrogen ratio was high. Survival of solitary Eriocrania species was negatively correlated with total leaf carbon content. However, the population density of solitary miners showed a negative correlation with total foliar nitrogen and a positive correlation with the carbon:nitrogen ratio. Performance of the gregarious E. haworthi was not correlated with the chemical composition of birch leaves, whereas population density was highest close to the factory complex and correlated positively with the levels of copper and nickel in birch leaves. Consequently, pollution-induced changes in measured host plant chemicals were unlikely to affect population densities of Eriocrania miners via altered larval performance.     

Effects on the function of Arctic ecosystems in the short- and long-term perspectives

Historically, the function of Arctic ecosystems in terms of cycles of nutrients and carbon has led to low levels of primary production and exchanges of energy, water and greenhouse gases have led to low local and regional cooling. Sequestration of carbon from atmospheric CO2, in extensive, cold organic soils and the high albedo from low, snow-covered vegetation have had impacts on regional climate. However, many aspects of the functioning of Arctic ecosystems are sensitive to changes in climate and its impacts on biodiversity. The current Arctic climate results in slow rates of organic matter decomposition. Arctic ecosystems therefore tend to accumulate organic matter and elements despite low inputs. As a result, soil-available elements like nitrogen and phosphorus are key limitations to increases in carbon fixation and further biomass and organic matter accumulation. Climate warming is expected to increase carbon and element turnover, particularly in soils, which may lead to initial losses of elements but eventual, slow recovery. Individual species and species diversity have clear impacts on element inputs and retention in Arctic ecosystems. Effects of increased CO2 and UV-B on whole ecosystems, on the other hand, are likely to be small although effects on plant tissue chemisty, decomposition and nitrogen fixation may become important in the long-term. Cycling of carbon in trace gas form is mainly as CO2 and CH4. Most carbon loss is in the form of CO2, produced by both plants and soil biota. Carbon emissions as methane from wet and moist tundra ecosystems are about 5% of emissions as CO2 and are responsive to warming in the absence of any other changes. Winter processes and vegetation type also affect CH4 emissions as well as exchanges of energy between biosphere and atmosphere. Arctic ecosystems exhibit the largest seasonal changes in energy exchange of any terrestrial ecosystem because of the large changes in albedo from late winter, when snow reflects most incoming radiation, to summer when the ecosystem absorbs most incoming radiation. Vegetation profoundly influences the water and energy exchange of Arctic ecosystems. Albedo during the period of snow cover declines from tundra to forest tundra to deciduous forest to evergreen forest. Shrubs and trees increase snow depth which in turn increases winter soil temperatures. Future changes in vegetation driven by climate change are therefore, very likely to profoundly alter regional climate.     

Study of the trace metal ion influence on the turnover of soil organic matter in cultivated contaminated soils

The role of metals in the behaviour of soil organic matter (SOM) is not well documented. Therefore, we investigated the influence of metals (Pb, Zn, Cu and Cd) on the dynamic of SOM in contaminated soils where maize (C4 plant) replaced C3 cultures. Three pseudogley brown leached soil profiles under maize with a decreasing gradient in metals concentrations were sampled. On size fractions, stable carbon isotopic ratio (delta13C), metals, organic carbon and nitrogen concentrations were measured in function of depth. The determined sequence for the amount of C4 organic matter in the bulk fractions: M3 (0.9)>M2 (0.4)>M1 (0.3) is in agreement with a significant influence of metals on the SOM turnover. New C4 SOM, mainly present in the labile coarser fractions and less contaminated by metals than the stabilised C3 SOM of the clay fraction, is more easily degraded by microorganisms.     

Microbial population of spruce soil in Tatachia mountain of Taiwan

To investigate the role of microorganisms in the ecology and the nutrient transformation of forest soil, soil property, microbial population, biomass and organic acid content of Spruce soil in Tatachia mountain were determined during January 1997 to November 1999. Soil temperatures were between 5.5 and 15.6 degrees C and soil pH ranged from 3.6 to 5.0. Total organic carbon and nitrogen contents ranged from 5.83% to 34.35% and from 0.90% to 3.19%, respectively. C/N ratio was between 7.07 and 18.24. Each gram of dry soil contained microbial biomass carbon 308-870 microg, microbial biomass nitrogen 107-240 microg, malic acid 74-211 nM and succinic acid 32-175 nM. In addition, each gram of dry organic layer contained microbial biomass carbon 216-653 microg, microbial biomass nitrogen 10.3-33.8 microg, formic acid 256-421 nM, acetic acid 301-435 nM, malic acid 795-1027 nM and succinic acid 204-670 nM. About 45.5-90.9% of topsoil samples had higher microbial population than those of subsoil especially in actinomycetes, cellulolytic and phosphate-solubilizing microorganisms. Although rhizosphere of Spruce had higher total organic carbon and total nitrogen content than non-rhizosphere and dwarf bamboo areas, the microbial population had no significant difference among them.