Data on biological productivity of the Western tropical Pacific Ocean

Vertical distribution and production of phytoplankton and planktonic bacteria were studied in the pelagic and neritic regions of the Western tropical Pacific Ocean and in temperate waters of the Japan Sea. The stable, layering structure of the community and its daily fluctuations caused by grazing are described. Data on the integral daily production of communities under 1 m² are presented. The data obtained are discussed with respect to the trophical relations in planktonic communities of the stratified sea basins.     

Seasonal distribution of modern coccolithophores in the western North Atlantic Ocean

The seasonal successions of standing crop and floral assemblage were studied for oceanic coccolithophores at 5 weather stations in the western North Atlantic Ocean. The coccolithophores were less populous during winter at the northern stations, whereas they became scarce during summer at the southern stations. The average standing crop in the surface water was quite consistent throughout all climatic regions, being a few tens of thousand cells per liter. The average standing crop at the 100 m level showed a clear trend of increasing southwards. The population at this depth was only one-tenth as large as that of the surface level at the northernmost station, whereas it was almost two-thirds as large as the surface levels at the southernmost station. Many of the major species exhibited seasonally biased occurrences. The trend was mostly repeated in consecutive years, although the magnitude of their abundances fluctuated from year to year in some case. The average species composition was obtained for the 5 weather stations at the surfacewater (surface and 20 m levels combined) and 100 m levels; Emiliania huxleyi dominated the flora at all stations. The relationship between occurrences of major species and ambient water temperature was also studied. Although some species were stenothermal, the majority exhibited eurythermal characteristics; this accounts for the high specific diversity of the coccolithophore community throughout the wide range of waters studied.Contribution No. 2899 of the Lamont-Doherty Geological Observatory of Columbia University.     

Molecular phylogeny and evolution of the pelagic copepod genus Neocalanus (Crustacea: Copepoda)

Portions of the mitochondrial genome (ca. 4 kb), encoding three protein-coding (COI, ND4L, ND6) and two ribosomal RNA (srRNA, lrRNA) genes, were sequenced for all six currently recognized species, plus one form, of the pelagic calanoid copepod genus Neocalanus. In Neocalanus gracilis, the ND6 gene was not found in the sequenced portion of the mitochondrial genome. Unambiguously aligned sequences were subjected to Bayesian, maximum-likelihood, maximum-parsimony, and neighbor-joining analyses using Eucalanus bungii as an outgroup. The resultant tree topologies from these four methods were congruent, robust, and all nodes were supported by high bootstrap values and posterior probabilities of 92–100%. Two tropical and subtropical species (N. gracilis and N. robustior) occupied the most basal position, and a subantarctic (N. tonsus) and three subarctic Pacific species (N. cristatus, N. plumchrus, and N. flemingeri) diverged subsequently. Transequatorial dispersal of the ancestral population during glaciations is suggested for this pattern of speciation, in which sister clades exhibited antitropical distributions. Although the area of ocean is much broader in the subantarctic than the subarctic Pacific, a higher number of species occur in the subarctic Pacific (three) than the subantarctic (one). The possibility that marginal seas, such as Japan Sea and Okhotsk Sea, function as natal areas for the divergence of species is discussed.     

Cycle annuel du phytoplancton et de la production primaire dans les mers tropicales

In this review, tropical seas are limited geographically by a minimum surface temperature of 22°C throughout the year. The relevant literature consists of nearly a hundred references, corresponding to about 45 stations or areas; most of these are neritic or subject to land mass or island mass effects; few studies have been made in both oceanic and neritic waters of the Pacific Ocean. In neritic waters, as a rule, an annual cycle of species composition and intensity of primary production is observed: seasonal variations are related to hydrography (currents, upwelling) or climate (winds, rains, monsoons); some cases reported are doubtful due to insufficient or only qualitative data; so far, not a single example can serve as a proof for the absence of an annual cycle. Oceanic data are much too meagre to allow a generalization to be drawn; seasonal, hydrographic, and climatic changes must often also be taken into account; in regions of permanent stratification, productivity can be expected to remain at a low and continuous level throughout the year, but direct evidence of this is still lacking. In temperate and cold waters, seasons are of world-wide significance due to changes in the relation between euphotic and mixing layers' depths, i.e., in availability of light and nutrients for phytoplankton growth; thus general models of annual cycles can be described. In tropical seas, on the other hand, seasons are only regional and ecological factors can act in opposite ways according to time and space, so that no world-wide picture can be worked out.     

Genetic differentiation in a pelagic crustacean (Meganyctiphanes norvegica: Euphausiacea) from the North East Atlantic and the Mediterranean Sea

Meganyctiphanes norvegica (M. Sars)is a pelagic crustacean that plays a key role in marine food webs of North Atlantic Ocean and marginal seas. We studied eight population samples collected in the European Atlantic and Mediterranean Sea. By means of single strand conformation polymorphism analysis (SSCP) and direct sequencing, we investigated a segment of 158 base pairs of the mitochondrial gene coding for the subunit 1 of NADH dehydrogenase. We found 12 sequence variants among the 385 individuals studied. Analysis of molecular variance (AMOVA) showed that 14.75% of the total genetic variability was explained by differences between populations, thus indicating absence of panmixia for these populations. Pairwise comparisons revealed three distinct genetic pools: the first one represented by Cadiz Bay, the second one by the Ligurian Sea, and the third one included all the NE Atlantic samples. We also investigated one population from the Alboran Sea (within the Mediterranean basin, east of the Strait of Gibraltar). This population was found to be genetically intermediate between the NE Atlantic samples and the Ligurian sample, suggesting that the restriction to the gene flow is not associated with the Strait of Gibraltar, but possibly with the Oran–Almeria oceanographic front. The present work indicates that M. norvegica, although endowed with a high dispersal capacity because of its pelagic habit, can develop separate breeding units inside the same oceanic basin (the Atlantic). Furthermore, the Ligurian sample should be considered as a distinct evolutionary entity, separated from the Atlantic population. Received: 2 May 1999 / Accepted: 26 November 1999     

Fine-scale distribution of juvenile cephalopods in the Scotia Sea and adaptive allometry of the brachial crown

The pelagic nekton community was sampled with the RMT 25 opening/closing net and a neuston net at two stations in the Scotia Sea south of the Antarctic Polar Front in the open ocean (Station 1) and on the South Georgia northwestern slope (Station 2). Downward oblique tows were made with the RMT 25 through discrete 200 m layers to 1000 m in daylight and darkness. A total of 119 cephalopods representing nine species were removed from the samples, and mantle and arm lengths were measured to the nearest 0.1 mm. The most abundant species at each station was an undescribed Brachioteuthis sp. (B. ?picta). Galiteuthis glacialis and Alluroteuthis antarcticus were caught at both stations. Histioteuthis eltaninae, Bathyteuthis abyssicola and Psychroteuthis glacialis were caught at Station 1. Mastigoteuthis psychrophila and a Chiroteuthis sp. were caught at Station 2. B. ?picta was present throughout the water column to 1000 m at both stations, with little evidence of ontogenetic descent. There was evidence for ontogenetic descent in G. glacialis. This species was absent from the Antarctic Surface Water (ASW) at Station 1, where it was concentrated in the Circumpolar Deep Water (CDW). At Station 2 it was present throughout the water column to 1000 m. The other species were all caught in the core of the CDW (>400 m). In juvenile B. ?picta, G. glacialis and A. antarcticus, growth of the brachial crown is positively allometric with respect to mantle length. Recent data on biomass spectra in high-latitude pelagic systems show that they are characterised by the presence of peaks of biomass separated by biomass minima. Positive allometric growth in the brachial crown of these antarctic oceanic squid is suggested to have evolved as an adaptation to the peaked, or domed, structure of the pelagic biomass spectrum which must be spanned by these predators as their optimum prey size increases with growth. Interspecific differences in the allometry of tentacle growth are probably related to differences in strategies for stalking and capture of prey.     

Size,spatial, and bathymetrical distribution of the ascidian Halocynthia papillosa in Mediterranean coastal bottoms: benthic–pelagic coupling implications

Benthic suspension feeders are abundant in Mediterranean coastal environments, though most of them are threatened due to overexploitation, climate change impacts, and unregulated diving or fishing practices. Little is known about most of the coastal communities in terms of large-scale distribution and realistic benthic–pelagic coupling implications, which are keys to understand and manage those threatened ecosystems. The active suspension feeder Halocynthia papillosa (one of the most common ascidian species of the Mediterranean Sea) was selected as a model organism to help to understand the ecological role in benthic–pelagic coupling processes and its importance as a carbon sink (an essential ecosystem service). The spatial and bathymetrical distribution of this organism has been studied using remotely operated vehicle video transects. The species was distributed throughout the study area, with a maximum density of 4 specimens m^?2. The highest abundances and the biggest sizes were observed on the range of 20–50 m depth. The role as carbon and nitrogen sink of this suspension feeder has been quantified coupling distribution data with existing in situ studies of feeding and respiration. Along the 1.24 ha of the study area, H. papillosa yearly ingested 519.4 g C and 31.4 g N and retained 20.2 g C. As long as the physiological data are known, this new methodology could be very useful in assessing bentho–pelagic links and the capacity of being C and N sinks of a wide range of species. This new approach may be essential for the future management of benthic communities.     

Zooplankton standing stock and community size structure within the epipelagic zone: a comparison between the central Red Sea and the Gulf of Aden

Standing stock and size composition of the zooplankton comunity (>100 m) were studied in four depth strata of the upper 200 m of the water column during a Meteor cruise to the central Red Sea and Gulf of Aden in spring 1987. The central Red Sea was divided into a northern area of higher salinity and a less saline southern part. Both areas exhibited significant differences in zooplankton abundance and standing stock. The latter increased by the ratio 1:2:3 from the northern central Red Sea to its southern part and further south to the Gulf of Aden. For size structure analysis samples were fractionated into three size classes (100 to 300, 300 to 500, 500 to 5000 m). In the central Red Sea the smallest size was dominant whereas in the Gulf of Aden the largest size fraction played a greater relative role than in the central Red Sea. This shift in size structure of the zooplankton community from the Red Sea to the Gulf of Aden is apparently primarily related to ecosystem difference between both areas, leading to a change in species composition. In addition, size reduction of individual species common to both seas may be of some significance in the extreme environment of the Red Sea.     

Divergence of mitochondrial DNA lineage of the rocky intertidal goby Chaenogobius gulosus around the Japanese Archipelago: reference to multiple Pleistocene isolation events in the Sea of Japan

Geographic variations in the mitochondrial cytochrome b gene sequence (1,062 nucleotides) of the rocky intertidal goby Chaenogobius gulosus were examined and compared against the phylogeographic pattern of its sympatric sister species Chaenogobius annularis, which we studied previously. We collected C. gulosus specimens from 17 localities around the Japanese Archipelago and Korean Peninsula. Thirty-one haplotypes were obtained. The phylogenetic tree showed three geographical lineages, of which one was distributed along the coast of the Sea of Japan, suggesting that a Pleistocene isolation event in the Sea of Japan affected the genetic divergence of this species, similar to that which was observed in C. annularis. The net nucleotide divergence between the Sea of Japan and Pacific Ocean lineages in C. gulosus was much lower than that of C. annularis. Both traditional molecular clock and hierarchical approximate Bayesian computational models suggest that different divergence events affected the genetic divergences of C. gulosus and C. annularis. Our study on the sister species pair strongly supports multiple isolation events in the Sea of Japan, leading to varying levels of genetic divergence between the Pacific Ocean and Sea of Japan lineages in the Japanese coastal marine species.     

Population genetic structure of escolar (<Emphasis Type="Italic">Lepidocybium flavobrunneum</Emphasis>)

Escolar (Lepidocybium flavobrunneum) is a large, mesopelagic fish that inhabits tropical and temperate seas throughout the world, and is a common bycatch in pelagic longline fisheries that target tuna and swordfish. Few studies have explored the biology and natural history of escolar, and little is known regarding its population structure. To evaluate the genetic basis of population structure of escolar throughout their range, we surveyed genetic variation over an 806 base pair fragment of the mitochondrial control region. In total, 225 individuals from six geographically distant locations throughout the Atlantic (Gulf of Mexico, Brazil, South Africa) and Pacific (Ecuador, Hawaii, Australia) were analyzed. A neighbor-joining tree of haplotypes based on maximum likelihood distances revealed two highly divergent clades (δ = 4.85%) that were predominantly restricted to the Atlantic and Indo-Pacific ocean basins. All Atlantic clade individuals occurred in the Atlantic Ocean and all but four Pacific clade individuals were found in the Pacific Ocean. The four Atlantic escolar with Pacific clade haplotypes were found in the South Africa collection. The nuclear ITS-1 gene region of these four individuals was subsequently analyzed and compared to the ITS-1 gene region of four individuals from the South Africa collection with Atlantic clade haplotypes as well as four representative individuals each from the Atlantic and Pacific collections. The four South Africa escolar with Pacific mitochondrial control region haplotypes all had ITS-1 gene region sequences that clustered with the Pacific escolar, suggesting that they were recent migrants from the Indo-Pacific. Due to the high divergence and geographic separation of the Atlantic and Pacific clades, as well as reported morphological differences between Atlantic and Indo-Pacific specimens, consideration of the Atlantic and Indo-Pacific populations as separate species or subspecies may be warranted, though further study is necessary.     

Particulate organic carbon and nitrogen in the adjacent seas of the Pacific Ocean

Particulate organic carbon (POC) and nitrogen in sea water were measured in samples collected in the adjacent seas of the Pacific Ocean during the cruises of T. S. Oshoro-Maru (1969, 1970) and the R. V. Hakuho-Maru (KH-70-4, KH-72-1). High values were obtained in the northern North Pacific and the Bering Sea, the concentration of particulate carbon in the upper 50-m layer ranged from 35 to 550 g Cl^-1. In the deep waters of these area, values above 50 g Cl^-1 were frequently observed. The lowest values in the surface layer and deeper layers were obtained in the Japan Sea (23 gCl^-1) and in the South China Sea (7 g Cl^-1) respectively. A consistent minimum was located in the intermediate waters (100–400 m) throughout the entire region studied. Variation with depth was generally irregular with marked peak values in different layers. The POC distribution consited of these peak values and a relatively uniform background concentration. These background values slightly decreased with increasing depth and were different locally. Correlation analysis between carbon concentration and apparent oxygen utilization (AOU) of ambient water for the samples in the Japan Sea and the Sulu Sea showed that there was no systematic decrease of particulate carbon with increasing AOU. In these areas, the carbon concentration scattered in the higher AOU domain ranged from 10–100 g Cl^-1. These observations support the conception that downward transport of particulate matter from the overlying surface layer in the adjacent seas of the Pacific Ocean may be fairly rapid.     

Offshore distributional patterns of Hawaiian fish larvae

An analysis of ichthyoplankton samples based on relative abundance reveals pronounced inshore/offshore distributional gradients for most Hawaiian fish larvae. Larvae of pelagic bay species are found almost exclusively in semi-enclosed bays and estuaries. Larvae of pelagic neritic species are more or less uniformly distributed with distance from shore. The larvae of reef species with non-pelagic eggs are most abundant close to shore, while those of reef species with pelagic eggs are most abundant offshore. Finally, the larvae of offshore (primarily mesopelagic) species show no clear pattern but frequently occur in high numbers nearshore. Within any group, variation in pattern was often evident; for example, although Hawaiian fishes of both the families Labridae and Mullidae spawn pelagic eggs, larvae of the former had not peaked in abundance 12 km from shore while larvae of the latter had peaked between 0.5 and 2 km. Some larvae which occur offshore are highly specialized morphologically for a pelagic existence (e.g. Chaetodontidae, which is illustrated) while others are little modified (e.g. Labridae). These findings indicate ichthyoplankton surveys in tropical areas must sample offshore areas in addition to the inshore adult habitat to obtain a complete picture.Hawaii Institute of Marine Biology Contribution No. 484.     

Asymmetric genetic exchange in the brown seaweed Sargassum fusiforme (Phaeophyceae) driven by oceanic currents

Geological phenomena (e.g. drastic sea level fluctuations during the Quaternary Ice Age in the Northern Hemisphere) have been demonstrated to intensively affect the biogeographic patterns and tempo-spatial compositions of genetic diversity of marine organisms. However, it is poorly understood whether contemporary factors such as oceanic surface currents have also shaped inter-regional population genetics of specific coastal marine flora, with or without limited dispersal capability. In this study, we determined mtDNA Cox1 gene sequences of the brown seaweed Sargassum fusiforme from nine populations along the Chinese coast and one population from the west coast of South Korea, in an effort to understand what factors are contributing to their current genetic structure and geographic distribution patterns. Genetic analyses indicated a deep genetic break between the Yellow-Bohai Sea (YBS) and the other two marginal seas, the East China Sea (ECS) and the South China Sea (SCS). In particular, the amount of genetic exchange from the SCS to each of the ECS and YBS was significantly higher than that from the opposite directions. Our analyses supports the hypothesis that biogeographic patterns of genetic variation in S. fusiforme are probably an interactive consequence of post-glacial colonization from two scattered refugia driven by the offshore Kuroshio Current and asymmetric gene flow among adjacent sea margins.     

Variability of epifauna and temperature in the northern North Sea

Benthic epifauna in three areas of the northern North Sea was studied from 1999 to 2007 to investigate the effect of temperature changes on community structure and species abundance and biomass. Abundance and/or biomass of 16 epifauna species was significantly correlated with temperature anomalies of the mean sea surface temperature (SST) from 1971 to 2000. The response of species to SST changes was different in the study areas depending on species life history and, most likely on food supply, which in turn is strongly influenced by the timing and duration of primary production and regional hydrographical conditions (e.g. stratification). Also, changes in community structure were obvious in the three areas between 2002 and 2003 coinciding with high temperature anomalies and SST. On the other hand, these changes were mainly caused by the variability in abundance of dominant species and altogether no clear trends in community structure were found. In contrast to epifauna communities in the shallow southern North Sea temperature changes in the northern North Sea affected only single epifauna species until now.     

Hepatic insufficiency in spawning Pacific salmon

The variability of some morpho-ecological factors was studied in 6 pelagic copepods from the North Aegean Sea. From the different findings it is concluded that temperature has a significant influence on body length; the higher the temperature of the environment during development, the shorter the body at maturity. The ratio of males to females is high in species which prefer warmer, and very low in species which prefer colder, waters. The percentage of copepodids in the entire population increases in winter and decreases considerably in summer.     

The influence of water stability on the vertical structure of a phytoplankton community

The vertical distribution of the phytoplankton community in association with water column stability was examined for 1 year in an inshore area of the Southern Aegean Sea. An analysis of variance model (split-plot design) was applied to evaluate the variations in the vertical profile of diatoms, flagellates and coccolithophores. When either weak stratification or mixing conditions prevailed, diatoms in general were uniformly distributed throughout the water column while flagellates and coccolithophores appeared occasionally stratified. During the strong stratification period, all taxa demonstrated significant variations in abundance between depths in most cases. However, none of these taxa was confined to a single depth stratum during either the water mixing or the stratification period, but were all present at all depths during all seasons. The results demonstrate clearly that the parameter taxon is an important component in ecological observations on the vertical distribution of phytoplankton.     

Genetic structure of wild European populations of the invasive Pacific oyster Crassostrea gigas due to aquaculture practices

As a result of aquaculture activities, Pacific oysters Crassostrea gigas (Thunberg, 1793) have invaded European coasts. Using seven microsatellites, we found virtually no genetic differentiation between natural populations throughout the European range (from the south of the Wadden Sea (the Netherlands) to the south of France) and French cultivated oysters. The genetic homogeneity of Pacific oyster samples appears to be the result of repeated transfers from same seed stocks made for aquaculture and, to a lesser extent, widespread dispersal due to specific biological traits of this species. The only genetic differentiation of Sylt population in the north of the Wadden Sea (Germany) suggests a stronger, persistent impact of ongoing supply of new genetic material from hatchery production, corresponding to seeds selection made by breeders. All of our genetic data highlighted the importance of aquaculture practices on the genetic structure of the keystone invader C. gigas in Europe.     

The effect of Po river discharge on phytoplankton dynamics in the Northern Adriatic Sea

An oceanographic transet,, extending from Yugoslavia across the Northern Adriatic Sea to the Po delta in Italy, was occupied during 1972 and 1973 to establish the effect of Po river discharge on the phytoplankton communities of the region. Density distribution showed distinct seasonal features: a winter-spring period of low stability throughout the water column, and a summer period of stratification. The total water-column plant nutrients (nitrate, nitrite, phosphate, silicate) showed a 1.3 to 4.5-fold decrease eastward, with semi-eutrophic conditions restricted to an area off the Po delta. Nannoplankton usually dominated the phytoplankton community, in terms of cell density, surface chlorophyll a concentrations, and surface primary production rates. However, all significant maxima in these characteristics resulted from increases in the microplankton component. Changes in the frequency of major microplankton groups characterized three periods of the annual cycle: September–December, neritic, temperate diatom flora with some littoral elements (e.g. Nitzschia seriata); January–May, neritic, temperate diatom flora of different composition (e.g. Lauderia borealis, Skeletonema costatum); May–August, dinoflagellates (e.g. Prorocentrum micans) at western stations and dinoflagellates plus neritic, warm-water diatoms at eastern stations. The seasonal cycle was characterized by spring and fall maxima tending to coincide with maximum Po river discharge and/or periods of low water-column stability and vertical mixing. The higher nutrient input at western stations was correlated with the co-dominance of only a few species of microplankton during bloom periods, suggesting that these species (S. costatum, N. seriata, and 5 others) can serve as indicators of eutrophic conditions in this region. Assimilation ratios of both the micro- and nannoplankton suggested borderline nutrient conditions. Phosphate was implicated as the limiting nutrient.     

Observations on mesopelagic fish from the Red Sea

Mesopelagic fish were collected from a cruise with the R.V. “Dr. Fridtjof Nansen” to the northern Red Sea and the interior Gulf of Aden off the Republic of Djibouti in March 1981. Off the Republic of Djibouti five species of mesopelagic fishes were caught and in the Red Sea six species. Benthosema pterotum (Alcock) were dominant in both areas. In the Red Sea Maurolicus muelleri (Gmelin) were also abundant. The mesopelagic fish caught in the Red Sea showed a pattern of vertical migration similar to that observed in other areas, in spite of the special hydrographical regime. The number of gill rakers of B. pterotum caught in the Red Sea differed significantly from that of all other populations studied. The number of photophores of M. muelleri apparently do not differ much from other populations. B. pterotum from the Red Sea mature at a larger size than other populations, while M. muelleri mature at a smaller size. The relative fecundity of M. muelleri is higher in the Red Sea than in other regions studied, while no significant difference was observed in B. pterotum. Both species appear to be opportunistic feeders. Their feeding chronology in the Red Sea seems to be similar to those observed in other areas.     

Coccolithophores: a major phytoplankton component in mature upwelled waters off the Cape Peninsula,South Africa in March, 1983

Coccolithophores, together with other phytoplankton, were sampled at ten stations along a transect following the general orientation of the Cape Peninsula upwelling plume in March, 1983. Thirteen coccolithophore species were identified with Emiliania huxleyi dominating the assemblages. Coccolithophores and other microflagellates were more abundant than diatoms along the transect except at one station in mature upwelled water. Very high populations (2 340×10³ cells l^-1) of coccolithophores were found in mature upwelled water adjacent to the oceanic front. This count is one of the highest counts ever recorded in an upwelling area. The anomalous warm event prior to sampling may have had a residual effect on seeding, contributing towards the predominance of small-celled phytoplankton over chain-forming diatoms.