Response of ammonia-oxidizing archaea and bacteria to long-term industrial effluent-polluted soils,Gujarat, Western India

Soil nitrifiers have been showing an important role in assessing environmental pollution as sensitive biomarkers. In this study, the abundance and diversity of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) were investigated in long-term industrial waste effluent (IWE) polluted soils. Three different IWE polluted soils characterized as uncontaminated (R1), moderately contaminated (R2), and highly contaminated (R3) were collected in triplicate along Mahi River basin, Gujarat, Western India. Quantitative numbers of ammonia monooxygenase α-subunit (amoA) genes as well as 16S rRNA genes indicated apparent deleterious effect of IWE on abundance of soil AOA, AOB, bacteria, and archaeal populations. Relatively, AOB was more abundant than AOA in the highly contaminated soil R3, while predominance of AOA was noticed in uncontaminated (R1) and moderately contaminated (R2) soils. Soil potential nitrification rate (PNR) significantly (P?<?0.05) decreased in polluted soils R2 and R3. Reduced diversity accompanied by apparent community shifts of both AOB and AOA populations was detected in R2 and R3 soils. AOB were dominated with Nitrosospira-like sequences, whereas AOA were dominated by Thaumarchaeal “group 1.1b (Nitrososphaera clusters).” We suggest that the significant reduction in abundance and diversity AOA and AOB could serve as relevant bioindicators for soil quality monitoring of polluted sites. These results could be further useful for better understanding of AOB and AOA communities in polluted soils.     

Restoration of taxonomic and functional genes after bioaugmentation of petroleum contaminated soil

Soil microbial ecosystems are responsive to environmental changes that underpin the biological functions of the soil. The present study was conducted to profile variations in the microbial ecological system of remediated soil (R) and petroleum contaminated soil (P) based on comparisons with soil that had not been contaminated (N), using a cloning library of taxonomic genes (16S rRNA gene for bacteria and 18S rRNA gene for eukaryotes) and functional genes (nifH, amoA and narG). The results showed that N and R had a similar distribution in both the taxonomic genes and functional genes for bacteria and eukaryotes, which were dominated by Proteobacteria and Arthropoda, respectively. Phylogenetic analysis based on the nifH gene showed that the sequences from the three soils were clustered into six taxonomic groups, Actinobacteridae, and Alpha-, Beta-, Gamma- and Delta-proteobacteria, as well as an unclassified group. Evaluation of the amoA gene revealed that all sequences derived from the three samples belonged to Betaproteobacteria. The R and N soil had similar Shannon-Wiener diversity index (H') values, both of which were significantly higher than that of the P soil. The most abundant bacterial phylotype identified in the N and R soils were the same and were related to an uncultured bacterial clone (GAN-SB17, FN423475). None of the narG genes were found in the P soil. Similar results in terms of distribution, composition and the related index were obtained for nifH and amoA. These parameters may comprise a biological ecology index that may be applied to aid the design, implementation and evaluation of soil bioremediation.     

Mercury fractionation in contaminated soils from the Idrija mercury mine region

Mercury (Hg) fractionation was investigated in contaminated soil in the Idrija Hg-mine region, Slovenia. The main aim of this study was to test and apply sequential extraction and quantification of different Hg phases in order to estimate the mobility and potential bioavailability of Hg in contaminated soils. Separation of Hg phases was performed by means of a selective sequential extraction procedure complemented by volatilization of elemental mercury (Hg0). The influence of temperature, moisture and storage on Hg0 volatilization was also investigated. The total Hg concentrations varied between 8.4 and 415 mg kg(-1) and were up to 40-fold higher than the maximum permissible set by Slovenian legislation. Fractionation measurements indicated cinnabar as the predominant Hg fraction, followed by Hg0. Accumulation of cinnabar predominantly occurred in coarse grained flood plain sediments, where on average it constituted more than 80% of total Hg. In contrast non-cinnabar fractions were found to be enriched in areas where fine grained material was deposited, reaching up to 60% of total Hg. The strong positive correlation (R2 = 0.71-0.99) among non-cinnabar fractions suggested that these fractions predominantly control the mobility and potential bioavailability of Hg. Sample pretreatment before fractionation influenced the partition of Hg between different fractions, and therefore fractionation in fresh, nontreated samples is suggested. In addition, the specificity of the extraction steps needs further attention, as it was shown that some extraction steps, such as the organo-chelating Hg fraction, do not provide meaningful results. This further suggests that protocols for mercury fractionation need further harmonization in order to improve the comparability of the results and their use in risk assessment. Volatile mercury fluxes averaged between 0.04 and 6.5 ng g(-1) h(-1). Good agreement (R2 = 0.81-0.95) was found between the non-cinnabar fractions and evaporation of Hg0. Both the temperature and sample moisture had significant effects on mercury volatilization. The results in this study were obtained at 70 degrees C, which may be somewhat high, in particular for bacterial activity which may also play an important role in Hg volatilization. Therefore it is strongly suggested that further optimisation of the protocol to assess Hg volatilization from soil is required.     

Distribution of mercury in chemical fractions of contaminated urban soils of Middle Amur,Russia

The distribution of mercury (Hg) in fractions of urban soils from two industrial cities in the Russian Far East which are subject to varying degrees of Hg contamination was examined. The speciation scheme applied was based on routine chemical extraction methods used in soil investigations. Such an approach enables the Hg data to be brought into correlation with soil basic fractions and the fate of Hg bound to different soil components to be followed. Humic acids and a non-hydrolysable residue (humin), i.e. the soil fractions most refractory to microbiotic and chemical attack, were found to be principal Hg repositories in the soils studied. This pattern was equally observed for slightly, moderately and heavily contaminated soils. Hymatomelanic acids do not appear to be an efficient Hg concentrator. In heavily contaminated soils, Hg concentrations were evident in mobile fractions of fulvic acids as well as in those fractions extracted by H2O and 0.05 M Na2-EDTA pH 3. A portion of Hg extracted by 1 M HCl increased in lower horizons, reflecting relatively weakly bound Hg.     

Distribution of heavy metals in agricultural soils near a petrochemical complex in Guangzhou, China

The aim of the study was to investigate influence of an industrialized environment on the accumulation of heavy metals in agricultural soils. Seventy soil samples collected from surface layers (0-20 cm) and horizons of five selected pedons in the vicinity area of petrochemical complex in Guangzhou, China were analyzed for Zn, Cu, Pb, Cd, Hg and As concentrations, the horizontal and vertical variation of these metals were studied and geographic information system (GIS)-based mapping techniques were applied to generate spatial distribution maps. The mean concentrations of these heavy metals in the topsoils did not exceed the maximum allowable concentrations in agricultural soil of China with the exception of Hg. Significant differences between land-use types showed that Cu, Pb, Cd, Hg and As concentrations in topsoils were strongly influenced by agricultural practices and soil management. Within a radius of 1,300 m there were no marked decreasing trends for these element concentrations (except for Zn) with the increase of distance from the complex boundary, which reflected little influence of petroleum air emission on soil heavy metal accumulation. Concentrations of Zn, Cu, Pb, Cd, Hg and As in the five pedons, particularly in cultivated vegetable field and orchard, decreased with soil depth, indicating these elements mainly originated from anthropogenic sources. GIS mapping was a useful tool for evaluating spatial variability of heavy metals in the affected soil. The spatial distribution maps allowed the identification of hot-spot areas with high metal concentration. Effective measures should be taken to avoid or minimize heavy metal further contamination of soils and to remediate the contaminated areas in order to prevent pollutants affecting human health through agricultural products.     

Distribution of heavy elements in urban and rural surface soils: the Novi Sad city and the surrounding settlements, Serbia

Concentrations of ten heavy elements (Cd, Co, Cr, Cu, Fe, Hg, Mn, Ni, Pb, and Zn), as well as the pH values, organic matter contents, and electrical conductivities were measured in the surface soil samples collected from 21 sites of urban areas in the city of Novi Sad, the second largest city in Serbia, its suburban settlement and the nearby villages. Range of the heavy element concentrations was from 0.16 mg/kg (for Hg) to 18,994 mg/kg (for Fe). Significantly higher Hg and Mn concentrations were observed in subgroups with rural and market garden samples in comparison to the subgroups with urban and grassland samples, respectively, while the contents of Pb found in the grasslands subgroup were significantly higher than in the subgroup with market garden soils. Only one sample of urban soil exceeded the maximum permissible value for Zn set by the relevant Serbian legislation. According to the Dutch soil quality standard, the Cd and Co concentrations in majority of the examined soils were higher than the target values for unpolluted soil. The content of Hg was above the target value in 52% of the samples, most of them belonging to the subgroup of market garden soils. The results for the Novi Sad city area were compared to the relevant data available for other cities in the Western Balkan Countries. Principal component analysis of data revealed seven outlying samples, while the rest of the analyzed samples were grouped together indicating similar heavy element patterns most probably due to mixed emission sources.     

Genotoxicity assessment of soils from wastewater irrigation areas and bioremediation sites using the Vicia faba root tip micronucleus assay

Genotoxicity potential of soils taken from wastewater irrigation areas and bioremediation sites was assessed using the Vicia faba root tip micronucleus assay. Twenty five soils were tested, of which 8 were uncontaminated soils and taken as the control to examine the influence of soil properties; 6 soils were obtained from paddy rice fields with a history of long-term wastewater irrigation; 6 soils were obtained from bioremediation sites to examine effects of bioremediation; and 5 PAH-contaminated soils were used to examine methodological effects between direct soil exposure and exposure to aqueous soil extracts on micronuclei (MN) frequency ( per thousand) in the V. faba root tips. Results indicate that soil properties had no significant influences on MN frequencies (p > 0.05) when soil pH varied between 3.4 to 7.6 and organic carbon between 0.4% and 18.6%. The MN frequency measured in these control soils ranged from 1.6 per thousand to 5.8 per thousand. MN frequencies in soils from wastewater irrigation areas showed 2- to 48-fold increase as compared with the control. Soils from bioremediation sites showed a mixed picture: MN frequencies in some soils decreased after bioremediation, possibly due to detoxification; whereas in other cases remediated soils induced higher MN frequencies, suggesting that genotoxic substances might be produced during bioremediation. Exposure to aqueous soil extracts gave a higher MN frequency than direct exposure in 3 soils. However, the opposite was observed in the other two soils, suggesting that both exposure routes should be tested in case of negative results from one route. Data obtained from this study indicate that the MN assay is a sensitive assay suitable for evaluating genotoxicity of soils.     

Effects of pig manure containing copper and zinc on microbial community assessed via phospholipids in soils

Pig manure (PM) is widely used as an organic fertilizer to increase yields of crops. Excessive application of compost containing relatively great concentrations of copper (Cu) and zinc (Zn) can change soil quality. To clarify the effects of different rates of application and to determine the optimal rate of fertilization, PM containing 1,115 mg Cu kg^?1, dry mass (dm) and 1,497 mg Zn kg^?1, dm was applied to alkaline soil at rates of 0, 11, 22, 44, 88, and 222 g PM kg^?1, dm. Phospholipid fatty acids (PLFAs) were used to assess soil microbial community composition. Application of PM resulted in greater concentrations of total nitrogen (TN), NH₄ ⁺-N, NO₃ ^?-N, total carbon (TC), soil organic matter (SOM) but lesser pH values. Soils with application rates of 88–222 g PM kg^?1, dm had concentrations of total and EDTA-extractable Cu and Zn significantly greater than those in soil without PM, and concentrations of T-Cu and T-Zn in these amended soils exceeded maximum limits set by standards in china. Except in the soil with a rate of 11 g PM kg^?1, dm, total bacterial and fungal PLFAs were directly proportional to rate of application of PM. Biomasses of bacteria and fungi were significantly greater in soils with application rates of 44–222 g PM kg^?1, dm than in the soil without PM. SOM, TC and EDTA-Zn had the most direct influence on soil microbial communities. To improve fertility of soils and maintain quality of soil, rate of application should be 22–44 g PM kg^?1 dm, soil containing Cu and Zn.     

Status of heavy metals in agricultural soils as affected by different patterns of land use

This study was conducted to determine status of heavy metals in agricultural soils under different patterns of land use. A total of 38, 40 and 45 soil samples for bare vegetable field, greenhouse vegetable field, and grain crop field were respectively taken from surface layer (0–20 cm) from selected experimental areas away from suburbs of ten counties (or districts or cities) in four provinces or municipalities of Huabei plain in north China. Information of crop production history, including varieties, rotation systems and fertilizer use, at the corresponding sampling sites was surveyed. Soil total Cu, Zn, Cd, Pb, Cr, As and Hg were measured. The results showed that the contents of total Cu, Zn, Cd, Pb, Cr, As, and Hg in the soil samples, especially soil total Cu and Zn contents, were higher in the bare vegetable field and the greenhouse vegetable field than that in the grain crop field. Long-term use of excessive chemical fertilizers and organic manures in the bare vegetable field and the greenhouse vegetable field contributed to the accumulation of Cu, Zn, and other heavy metals in the soils. The contents of total Cu, Zn, and other heavy metals in soils increased with increasing vegetable production history of the research areas. In comparison with the grain crop field, the comprehensive pollution indices of the seven soil heavy metals and the single-factor pollution indices of soil Zn, Cu, Cd, Cr, and Hg based on the second criterion of Environmental Quality Standard for Soils were significantly higher in the bare vegetable field and the greenhouse vegetable field. Soils from the greenhouse vegetable field were slightly contaminated according to the comprehensive pollution index, and soils from the bare vegetable field and the grain crop field were at the warning heavy metal pollution level. The soils were contaminated with Cd according to the single-factor pollution index. The Cd pollution was relatively more serious in the bare vegetable field and the greenhouse vegetable field than that in the grain crop field. The soils selected with different land use patterns were not contaminated with Zn, Cu, Pb, Cr, As and Hg.     

Distribution and sources of mercury in soils from former industrialized urban areas of Beijing, China

Fifty-seven typical surface soils and 108 deeper soils were collected from five former industrial sites in Beijing and concentrations of total Hg (SigmaHg) as well as pH, total carbon (TC), total nitrogen (TN), total sulfur, and dissolved organic carbon concentrations determined. The mean concentration of SigmaHg in surface soils was significantly greater than background concentrations in the vicinity of Beijing. Forty-eight percent of the samples exceeded the "critical" concentration of 1.0 mg Hg/kg, dry weight in soils, which has been established by the Chinese government. At depths of 0-80 cm in the soil, profile concentrations of SigmaHg also exceeded the background value. There were significant correlations between concentrations of SigmaHg, TC, and TN in the industrial soils. The greater concentration of SigmaHg in most soils could have been due in part to combustion of coal and leakage from industrial processes.     

Monitoring of total and bioavailable heavy metals concentration in agricultural soils

The aim of this paper is to evaluate total and bioavailable concentration of heavy metals in agricultural soils in order to estimate their distribution, to identify the possible correlations among toxic elements and the pollution sources, to distinguish the samples in relation to sampling site or to sampling depth, and to evaluate the available fraction providing information about the risky for plants. In particular, we reinvestigated total concentrations of As, Be, Cd, Cr, Cu, Fe, Hg, Mn, Ni, Pb, Sb, V, and Zn and available concentrations of As, Be, Cd, Cr, Cu, Hg, Ni, Pb, Sb, and Zn in soil from Apulia (Southern Italy). Analytical results showed that total concentrations, for all soils, are in the range permitted by regulations in force in Italy, but some soils evidence slight enrichment of Cd, Cr, Cu, Pb, and Zn. All the heavy metals in the available fraction were below the detection limits of the analytical techniques used except Cu, Ni, Pb, and Zn.     

Assessment of inceptisols soil quality following long-term cropping in a calcareous environment

The combination of morphological, clay mineralogy, physicochemical, and fertilitical properties of inceptisols were compared for monitoring soil quality response following long-term agricultural activities. For this target, fifty-nine paired surface soils belonging to five subgroups of inceptisols from the major sugar beet growing area and the adjoining virgin lands were described, sampled, and analyzed. The soils were alkaline and calcareous as characterized by high pH, ranging from 7.2 to 8, and calcium carbonate equivalent, ranging from 60 to 300 g kg^− 1. Following long-term sugar beet cultivation, morphological properties modifications were reflected as weakening of structure, hardening of consistency, and brightening of soil color. Although, the quantity of clay minerals did not significantly change through long-term cropping, some modifications in the XRD pattern of illite and smectite were observed in the cultivated soils compared to the adjoining virgin lands mainly as a result of potassium depletion. Without significant variation, sand content decreased by 4–55% and silt and clay increased by 3–22% and 2–15%, respectively, in the cultivated soils than to that of the virgin lands. Both negative and positive aspects of soil quality were reflected regarding soil chemical and fertilitical properties and the role of negative effects far exceeded the role of positive effects. Typic calcixerepts was known to be more degraded through a significant decrease (P ≤ 0.001) in mean value of soil organic carbon (a drop of 24%), total N (a drop of 23%), available K (a drop of 42%), exchangeable K (a drop of 45%), potassium adsorption ratio and potassium saturation ratio (a drop of 44% and 42%, respectively) and a significant increase (P ≤ 0.001) in EC (a rise of 53%). Soil quality index, calculated based on nine soil properties [coarse fragments, pH, SOC, total N, ESP, exchangeable cations (Ca, Mg, and K), and available phosphorus], indicated that 60% of the all soil types studied had negative changes, 20% had positive changes, and 20% produced no changes in soil heath.     

Uncertainty assessment of mapping mercury contaminated soils of a rapidly industrializing city in the Yangtze River Delta of China using sequential indicator co-simulation

Accurate characterization of heavy-metal contaminated areas and quantification of the uncertainties inherent in spatial prediction are crucial for risk assessment, soil remediation, and effective management recommendations. Topsoil samples (0–15 cm) (n = 547) were collected from the Zhangjiagang suburbs of China. The sequential indicator co-simulation (SIcS) method was applied for incorporating the soft data derived from soil organic matter (SOM) to simulate Hg concentrations, map Hg contaminated areas, and evaluate the associated uncertainties. High variability of Hg concentrations was observed in the study area. Total Hg concentrations varied from 0.004 to 1.510 mg kg⁻¹ and the coefficient of variation (CV) accounts for 70%. Distribution patterns of Hg were identified as higher Hg concentrations occurred mainly at the southern part of the study area and relatively lower concentrations were found in north. The Hg contaminated areas, identified using the Chinese Environmental Quality Standard for Soils critical values through SIcS, were limited and distributed in the south where the SOM concentration is high, soil pH is low, and paddy soils are the dominant soil types. The spatial correlations between Hg and SOM can be preserved by co-simulation and the realizations generated by SIcS represent the possible spatial patterns of Hg concentrations without a smoothing effect. Once the Hg concentration critical limit is given, SIcS can be used to map Hg contaminated areas and quantitatively assess the uncertainties inherent in the spatial prediction by setting a given critical probability and calculating the joint probability of the obtained areas.     

Mercury emission and dispersion models from soils contaminated by cinnabar mining and metallurgy

The laboratory flux measurement system (LFMS) and dispersion models were used to investigate the kinetics of mercury emission flux (MEF) from contaminated soils. Representative soil samples with respect to total Hg concentration (26-9770 μg g(-1)) surrounding a decommissioned mercury-mining area (Las Cuevas Mine), and a former mercury smelter (Cerco Metalúrgico de Almadenejos), in the Almadén mercury mining district (South Central Spain), were collected. Altogether, 14 samples were analyzed to determine the variation in mercury emission flux (MEF) versus distance from the sources, regulating two major environmental parameters comprising soil temperature and solar radiation. In addition, the fraction of the water-soluble mercury in these samples was determined in order to assess how MEF from soil is related to the mercury in the aqueous soil phase. Measured MEFs ranged from less than 140 to over 10,000 ng m(-2) h(-1), with the highest emissions from contaminated soils adjacent to point sources. A significant decrease of MEF was then observed with increasing distance from these sites. Strong positive effects of both temperature and solar radiation on MEF was observed. Moreover, MEF was found to occur more easily in soils with higher proportions of soluble mercury compared to soils where cinnabar prevails. Based on the calculated Hg emission rates and with the support of geographical information system (GIS) tools and ISC AERMOD software, dispersion models for atmospheric mercury were implemented. In this way, the gaseous mercury plume generated by the soil-originated emissions at different seasons was modeled. Modeling efforts revealed that much higher emissions and larger mercury plumes are generated in dry and warm periods (summer), while the plume is smaller and associated with lower concentrations of atmospheric mercury during colder periods with higher wind activity (fall). Based on the calculated emissions and the model implementation, yearly emissions from the "Cerco Metalúrgico de Almadenejos" decommissioned metallurgical precinct were estimated at 16.4 kg Hg y(-1), with significant differences between seasons.     

Assessing heavy metal pollution in the water level fluctuation zone of China’s Three Gorges Reservoir using geochemical and soil microbial approaches

The water level fluctuation zone (WLFZ) in the Three Gorges Reservoir is located in the intersection of terrestrial and aquatic ecosystems, and assessing heavy metal pollution in the drown zone is critical for ecological remediation and water conservation. In this study, soils were collected in June and September 2009 in natural recovery area and revegetation area of the WLFZ, and geochemical approaches including geoaccumulation index (I _geo) and factor analysis and soil microbial community structure were applied to assess the spatial variability and evaluate the influence of revegetation on metals in the WLFZ. Geochemical approaches demonstrated the moderate pollutant of Cd, the slight pollutant of Hg, and four types of pollutant sources including industrial and domestic wastewater, natural rock weathering, traffic exhaust, and crustal materials in the WLFZ. Our results also demonstrated significantly lower concentrations for elements of As, Cd, Pb, Zn, and Mn in the revegetation area. Moreover, soil microbial community structure failed to monitor the heavy metal pollution in such a relatively clean area. Our results suggest that revegetation plays an important role in controlling heavy metal pollution in the WLFZ of the Three Gorges Reservoir, China.     

Bacterial communities in urban aerosols collected with wetted-wall cyclonic samplers and seasonal fluctuations of live and culturable airborne bacteria

Airborne transmission of bacterial pathogens from point sources (e.g., ranches, dairy waste treatment facilities) to areas of food production (farms) has been suspected. Determining the incidence, transport and viability of extremely low levels of pathogens require collection of high volumes of air and characterization of live bacteria from aerosols. We monitored the numbers of culturable bacteria in urban aerosols on 21 separate days during a 9 month period using high volume cyclonic samplers at an elevation of 6 m above ground level. Culturable bacteria in aerosols fluctuated from 3 CFU to 6 million CFU/L of air per hour and correlated significantly with changes in seasonal temperatures, but not with humidity or wind speed. Concentrations of viable bacteria determined by fluorescence staining and flow cytometry correlated significantly with culturable bacteria. Members of the phylum Proteobacteria constituted 98% of the bacterial community, which was characterized using 16S rRNA gene sequencing using DNA from aerosols. Aquabacterium sp., previously characterized from aquatic environments, represented 63% of all clones and the second most common were Burkholderia sp; these are ubiquitous in nature and some are potential human pathogens. Whole genome amplification prior to sequencing resulted in a substantial decrease in species diversity compared to characterizing culturable bacteria sorted by flow cytometry based on scatter signals. Although 27 isolated colonies were characterized, we were able to culture 38% of bacteria characterized by sequencing. The whole genome amplification method amplified DNA preferentially from Phyllobacterium myrsinacearum, a minor member of the bacterial communities, whereas Variovorax paradoxus dominated the cultured organisms.     

Effects of long-term irrigation with treated wastewater on soil quality,soil-borne pathogens,and living organisms: case study of the vicinity of El Hajeb (Tunisia)

Medium (i.e. 15 years) and long-term (i.e. 20 years) impact of irrigation using secondary-treated municipal wastewater (TWW) was assessed on two agricultural soil samples, denoted by E and G, respectively, in the vicinity of El Hajeb region (Southern Tunisia). Soil pH, electrical conductivity particle size grading, potential risk of salinity, water holding capacity and chemical composition, as well as organic matter content, pathogenic microorganisms and heavy metal concentrations in the TWW-irrigated (E and G) and rainwater-irrigated (T) soils at various depths, were monitored and compared during a 5-year experiment. Our study showed that bacterial abundance is higher in sandy–clayey soil, which has an enhanced ability to retain moisture and nutrients. The high level of bacterial flora in TWW-irrigated soils was significantly (p?<?0.05) correlated (r?=?~0.5) with the high level of OM. Avoidance assays have been used to assess toxic effects generated by hazards in soils. The earthworms gradually avoided the soils from the surface (20 cm) to the depth (60 cm) of the G transect and then the E transect, preferring the T transect. The same behaviour was observed for springtails, but they seem to be less sensitive to the living conditions in transects G and E than the earthworms. The avoidance response test of Eisenia andrei was statistically correlated with soil layers at the sampling sites. However, the avoidance response test of Folsomia candida was positively correlated with silt-clay content (+0.744*) and was negatively correlated with sand content (?0.744*).     

Microbiological characteristics in a zero-valent iron reactive barrier

Zero-valent iron (Fe⁰)-based permeable reactive barriertreatment has been generating great interest for passivegroundwater remediation, yet few studies have paid particularattention to the microbial activity and characteristics withinand in the vicinity of the Fe⁰-barrier matrix. The presentstudy was undertaken to evaluate the microbial population andcommunity composition in the reducing zone of influence byFe⁰ corrosion in the barrier at the Oak Ridge Y-12 Plantsite. Both phospholipid fatty acids and DNA analyses were usedto determine the total microbial population and microbialfunctional groups, including sulfate-reducing bacteria,denitrifying bacteria, and methanogens, in groundwater andsoil/iron core samples. A diverse microbial community wasidentified in the strongly reducing Fe⁰ environment despitea relatively high pH condition within the Fe⁰ barrier (up topH 10). In comparison with those found in the backgroundsoil/groundwater samples, the enhanced microbial populationranged from 1 to 3 orders of magnitude and appeared to increase from upgradient of the barrier to downgradient soil. Inaddition, microbial community composition appeared to change overtime, and the bacterial types of microorganismsincreased consistently as the barrier aged. DNA analysisindicated the presence of sulfate-reducing and denitrifyingbacteria in the barrier and its surrounding soil. However, theactivity of methanogens was found to be relatively low,presumably as a result of the competition by sulfate/metal-reducing bacteria and denitrifying bacteria because of the unlimited availability of sulfate and nitrate in the site groundwater. Results of this study provide evidenceof a diverse microbial population within and in the vicinity ofthe iron barrier, although the important roles of microbial activity, either beneficially or detrimentally, on the longevityand enduring efficiency of the Fe⁰ barriers are yet to be evaluated.     

Baseline concentrations of trace elements in residential soils from Southeastern Missouri

Anthropogenic sources of pollution can significantly contribute to elevated concentrations of toxic elements in soils. A preliminary survey of trace elements content and their availability in residential soils from New Madrid County, Missouri was undertaken. Mean elemental concentrations (mg kg⁻¹, dry wt) of sixty two soil samples were: As 6.6, Be 0.8, Cd 1.6, Co 9.7, Cr 24.5, Cu 18.1, Fe 9951, Mn 298, Ni 15.6, Pb 48.8, V 42.1, Zn 95.5 and Hg 0.05. The US EPA preliminary remediation goals (PRGs) was only exceeded by As (7 % of samples) and V (8% of samples). The Missouri average background values were exceeded by Pb (69%), Zn (31%), Cu (27%), As (23%), Be (19%), Co (18%), Ni (16%), V (8%) and Mn (2%). Crustal enrichments (EF_c) for As (97), Cr (6), Cu (10), Pb (121), V (7), and Hg (17) were highest for North Lilbourn soils. Fractionation experiment revealed that Fe (54–79%) was in the residual phase while Zn (70–90%), Mn (88–92%), As (59–81%) and Pb (63–79%) were potentially available in soils. Factor loadings of the element concentrations on principal components 1, 2 and 3 accounted for over 81% variance of the data set. The factor loadings suggested that apart from natural contributions of trace elements to the soils, human activities possibly accounted for other inputs in soils.     

Isolation and characterization of metal resistant-tolerant rhizosphere bacteria from the serpentine soils in Turkey

Despite the number of studies describing metal hyper-accumulating plants and their associated bacteria in various regions and countries, there is no information on rhizosphere microbial potential of the Turkish serpentine soils. This study aimed to explore the rhizosphere microbial diversity of Ni-resistant, hyper-accumulating plants grown on Ni-rich soils and their metal tolerance–resistance characteristics. One hundred ninety-one locations were visited to collect soil and plant samples from different serpentine regions of Western Turkey. Following bioavailable and total Ni analysis of collected samples, the seeds of the selected plants with higher Ni content were taken to the growth/germination test in a range of serpentine soils in a growth chamber condition. In order to investigate the rhizosphere microbial diversity, Isatis pinnatiloba and Alyssum dasycarpum which were able to germinate and grow well in the preliminary tests, were introduced to 6-month greenhouse experiment in the range of three serpentine soils with higher bioavailable Ni content. I. pinnatiloba had a better stimulatory effect on the rhizosphere microbial diversity. A total of 22 bacterial isolates were identified from different soil conditions in the end of experiment. Following microbial identification and confirmation tests, 11 isolates were found to be resistant and tolerant to the increasing concentrations of Ni, Pb, Cd and Zn in the range of 50–2,000 mg L^− 1, which was considerably higher than those indicated by earlier studies. The strains isolated and identified from the Turkish serpentine soils were the members of genera Arthrobacter, Bacillus, Microbacterium and Staphylococcus.