An instance of bacterial inhibition in oceanic surface water

Water from the 150 surface film 50 miles north of Puerto Rico at 19°30 N, 66°30W supported only a negligible microflora compared to that of adjacent stations. Bacteriostasis was indicated when a ten-fold dilution of the sample resulted in a ninety-fold increase in cultivable microorganisms. The surviving organisms, atypical pseudomonads, were biochemically inactive in comparison to isolates from the other stations. Net phytoplankters at this station were similar in relative composition and abundance to those at the adjacent station.     

Uptake of inorganic carbon and internal carbon cycling in symbiont-bearing benthonic foraminifera

Incorporation rates of inorganic carbon and its distribution between the organic matter and the skeleton have been measured using ¹⁴C tracer techniques on two species of symbiont-bearing benthonic foraminifera in the Gulf of Elat: Amphistegina lobifera (a perforate species) and Amphisorus hemprichii (an imperforate species). Under constant experimental conditions, incorporation rates of the radiotracer become linear with time after several hours in A. hemprichii and after one day in A. lobifera. A. lobifera showed a lag time of 24 h for skeletal incorporation, whereas in A. hemprichii uptake into the skeleton started within 2 h. Pulse-chase incubations in radioactive seawater, followed by unlabelled incubations, demonstrate transfer of photosynthetically acquired ¹⁴C into the skeleton of A. lobifera. No such transfer was found in A. hemprichii. The total ¹⁴C uptake by A. lobifera increased during the first 24 h of cold chase incubation. This increase suggests the existence of an internal inorganic carbon pool that was lost (probably evaporated) during the analysis of pulse incubations. However, during the following chase incubations, the ¹⁴C in this pool was incorporated mainly into the skeleton and retained during analysis, causing the increase in the total uptake. No such increase was found in A. hemprichii. Additional ¹⁴C uptake experiments on other species of the genera Operculina, Heterostegina and Borelis suggest that the differences in pathways for incorporation of carbon between A. lobifera and A. hemprichii can be generalized to the perforate and imperforate foraminiferal groups. In perforate species, respired carbon originally taken up through photosynthesis is partly recycled into the skeleton. In imperforate species such a transfer has not been demonstrated. Perforate species seem to have a large internal inorganic carbon pool which serves mainly for calcification and possibly also for photosynthesis, while imperforate species may take up carbon for calcification directly from seawater or have a very small inorganic carbon pool.     

Phytoplankton production: seasonal change in the oceanic eastern tropical Pacific

The suggestion that the annual cycle of plant production in tropical oceanic regions may be negligible or non-existent is examined, using data from a year-long cruise series in the eastern tropical Pacific. Results of analysis of variance show a highly significant seasonal effect. Average values of the seasonal cycle were found to range from 127 to 318 mg C/m²/day, a systematic two-fold variation over the year. Annual production was 75 g C/m²/year. Significant differences also were found between longitudes, and a slightly significant interaction occurred between season and longitude. Probable sources of the seasonal cycle include time variation of thermocline topography and variation of nutrient supply from local source areas such as the Costa Rica Dome, Gulf of Tehuantepec, Peru Current extension, and Equatorial Undercurrent domain.     

A model on the carbon cycling in Lake Taihu, China

A model of the carbon cycling in Lake Taihu was developed based on the previous developed model EcoTaihu Model, which couples the hydrology, the nutrient cycling and a number of biological processes. The carbon cycling model (abbreviated CCM) has in addition to the states variables of the EcoTaihu Model, the carbon in phytoplankton, zooplankton, fish, macroplant, hydrogen carbonate carbon, carbonate carbon, dissolved carbon, abiotic organic carbon in water, organic carbon in sediment, soluble organic carbon in pore water, inorganic carbon in sediments, soluble inorganic carbon in pore water and pH. The calibration and validation of the CCM showed that the model results are in good accordance with the observations (from the period February17 to December. 5, 2003). It implies that the model can be used to assess the variation of the carbon dioxide flux at the water-air interface, and to find the pH value of the lake water as function of time. According to the model, the carbon dioxide flux at the water-air interface has clear, diurnal variations. Eutrophied water is a sink for the atmospheric carbon dioxide due to the phytosynthesis during the summer. Due to the terrestrial input of carbon to the lake, Lake Taihu is, however, a source of atmospheric carbon dioxide. The total annual flux is almost equal to the terrestrial input of carbon to the lake.     

Responses of a bacterial pathogen to phosphorus limitation of its aquatic invertebrate host

Host nutrition is thought to affect the establishment, persistence, and severity of pathogenic infections. Nutrient-deficient foods possibly benefit pathogens by constraining host immune function or benefit hosts by limiting parasite growth and reproduction. However, the effects of poor elemental food quality on a host's susceptibility to infection and disease have received little study. Here we show that the bacterial microparasite Pasteuria ramosa is affected by the elemental nutrition of its aquatic invertebrate host, Daphnia magna. We found that high food carbon:phosphorus (C:P) ratios significantly reduced infection rates of Pasteuria in Daphnia and led to lower within-host pathogen multiplication. In addition, greater virulent effects of bacterial infection on host reproduction were found in Daphnia-consuming P-deficient food. Poor Daphnia elemental nutrition thus reduced the growth and reproduction of its bacterial parasite, Pasteuria. The effects of poor host nutrition on the pathogen were further evidenced by Pasteuria's greater inhibition of reproduction in P-limited Daphnia. Our results provide strong evidence that elemental food quality can significantly influence the incidence and intensity of infectious disease in invertebrate hosts.     

Russell's definite description analysis of production and limitation of phytoplankton species

The majority of phytoplankton species observed in the southwestern Atlantic Ocean produce new cells to equal cells lost, if any, to grazing and sinking. At the same time these species must limit new cells to numbers equalling any lost, since their abundance remains about the same in both deep and shallow areas. Of each of these species one may assert: the producer is a limiter (1). One species, coccolithus huxleyi, produces cells to offset any lost in deep water but does not limit, as it drifts into shallow water, new cells to equal the number lost in deep water, since it is more abundant in shallow than in deep water. For C. huxleyi it is true that the producer is not a limiter (2). However, once in the shallows, C. huxleyi is in a steady state, so that nutrient concentration both produces and limits new cells to equal any lost. Thus, (2) converts to (1) by having nutrient concentration the producer and the limiter. “The producer is a limiter” is a covering statement. Asserting it covers all observable species; denying it covers species not observed, those rare species which can only be found by more exhaustive sampling.     

大气CO2升高对土壤碳循环影响的研究进展

土壤有机碳是陆地碳库的重要组成部分,其积累和分解的变化直接影响全球的碳平衡。据估计,全球土壤（表层1m）有机碳积累总量相当于大气中碳总量的2～3倍。土壤是温室气体的源或汇,土壤碳库的变化将影响大气C02的浓度,因此,土壤碳库对人类活动的响应也是全球碳循环和全球变化研究的热点。在全球变化的大背景下,大气CO2升高导致植被生态系统碳平衡的改变进而对土壤碳循环产生影响。总结了陆地生态系统碳循环对大气C02浓度升高响应的主要生物学机制及过程,简述了大气C02浓度升高对影响土壤碳输入和输出的各因素的研究进展,并指出未来研究的主要方向。在大气C02浓度升高条件下,陆地生态系统碳循环的变化主要反映在以下几个方面：1）不同类型植物群落的净初级生产力（NPP）显著增加,但湿地植物的净初级生产力也有可能降低;2）光合产物向根系分配的数量增加,地上／地下生物量降低,根系形态发生变化,根系周转速率和根系分泌等过程的碳流量提高;3）植物含氮量降低,C／N提高,次生代谢产物增加,微生物生长受到抑制,植物残体分解速率降低;4）土壤呼吸速率显著增加,提高幅度受植物类型与土壤状况的影响;5）进入土壤的植物残体及分泌物的数量和性质影响土壤酶的活性,脱氢酶和转化酶活性增加,酚氧化酶和纤维素酶受植物类型与环境条件的影响;6）土壤中真菌的数量的增加幅度要高于细菌;7）CH4释放量增加,在植物的生长期表现更为明显。由于陆地生态系统碳循环的复杂性,研究结果仍有很大的不确定性。大气C02浓度升高与全球变化的其它表现间的交互作用将是今后研究的重点,同时由于土壤碳循环是一个由微生物介导的生物地球化学循环过程,因此,加强陆地生态系统碳循环的微生物机制研究也将为全面理解碳循环的过程提供更加准确的研究理论基础。     

森林土地利用变化及其对碳循环的影响

由于人口剧增，人类活动的影响不断加大，在过去100年全球土地利用／土地覆被发生了巨大的变化。最常见的土地利用变化是由森林转变为农业用地。森林砍伐使森林生态系统地上部生物量大大减少，砍伐后作农业用地，降低了植被生产力，减少了土壤有机质的输入，增强了腐殖质的矿化作用，有机质分解速率增加，有机碳贮量随之降低，从而影响到森林生态系统的碳循环，使大量碳元素释放到大气中，引起温室效应，导致全球变暖。另一个常见的土地利用变化是植树造林和森林恢复，这一过程可以增加森林生态系统的碳储量，从而减缓大气CO2体积分数的上升。     

Annual biomass and production of the oceanic copepod community off Discovery Bay,Jamaica

Monthly samples were collected in oceanic waters off Discovery Bay, Jamaica, in 60- and 200-m vertical hauls, using 200- and 64-m mesh plankton nets, from June 1989 to July 1991. Length-weight regressions were derived for twelve genera of copepods (R²=0.79 to 0.97). For eight occasions spanning the study period, biomass estimates generated from these length-weight regressions differed by only 3% from direct weight determinations. The mean ash content of copepods was 7.1%, and the energy density was 20.8 kJ g^-1 ash-free dry weight (AFDW). Mean annual biomass of the total copepod community in the upper 60 m was 1.83 mg AFDW m^-3 (range 1.14 to 2.89 mg AFDW m^-3), and for the 200-m water column was 0.96 mg AFDW m^-3 (range 0.12 to 1.99 mg AFDW m^-3). Estimates of generation times for five common taxa ranged from 16.1 to 33.4 d. None of the taxa investigated displayed isochronal development; in general, stage duration increased in later copepodite stages. Weight increments showed a significant decrease in later copepodite stages, but with strong reversal of the trend from stage 5 to adult female in most species. Daily specific growth rates also declined in later copepodite stages, and ranged from 1.49 d^-1 in stage 1–2 Paracalanus/Clausocalanus spp. to 0.04 in stage 5-female of Oithona plumifera. Progressive food limitation of somatic copepodite growth and egg production is postulated. Naupliar production was 50.4 to 59.5% of copepodite production, and egg production was 35.1 to 27.7% of copepodite production in the 60-and 200-m water columns, respectively. Total annual copepod production, including copepodites, nauplii, eggs and exuviae, was 160 kJ m^-2 yr^-1 for the upper 60 m and 304 kJ m^-2 yr^-1 for the upper 200 m. Secondary production of the copepod community in oceanic waters off Discovery Bay approaches 50% of the corresponding value in tropical neritic waters.     

Diel variation of TCO2 in the upper layer of oceanic waters reflects microbial composition,variation and possibly methane cycling

Six diel TCO₂ cycles determined by infrared (IR) photometry from five drift stations occupied between 24 February and 16 March 1979 in the mixed layer of the northwestern Caribbean Sea are examined. Comparison of TCO₂ variation with coincident salinity and O₂ variation demonstrated that TCO₂ often co-varied with these independently measured variables. During five diel cycles TCO₂ variation was characterized by nocturnal production and diurnal consumption. The inverse, diurnal production of CO₂, occurred downstream from Misteriosa Bank, whose corals apparently contributed to a water mass having a twofold increase of POC and a sixfold larger population of heterotrophic nanoplankters. For the five diel studies carried out in waters with balanced or nearly blanced heterotrophic and phototrophic components of the nanoplankton, CO₂ consumption at constant salinity always occurred between 06.00 and 09.00 hrs. Net uptake often continued through 15.00 hrs, but not always in the absence of significant salinity changes. At constant salinity net O₂ evolution never exceeded 0.5 mol l^-1 h^-1 while net CO₂ uptake consistently averaged 3 mol l^-1 h^-1 for an apparent net production of 36 mg C m^-3 h^-1, which greatly exceeds the O₂ changes and open ocean ¹⁴C estimates from the literature. Diurnal consumption was apparently balanced by nocturnal production of CO₂ so that no significant net daily change in TCO₂ was observed. Departures from theoretical PQ and RQ and the possibility of nocturnal variations in formaldehyde and carbonate alkalinity imply that chemotrophs, both methane producers and methane oxidizers, play a significant role in CO₂ cycling. This could be through the metabolism of the nonconservative gases CH₄, CO, and H₂, and a link between chemotrophy and phototrophy through these gases is hypothesized. These open system measurements were subject to diffusion and documentable patchiness, but temporal TCO₂ changes appear to indicate the net direction of microbiological activity and join a growing body of literature showing dynamic variation in CO₂ and O₂ that exceeds estimates by ¹⁴C bottle assays of carbon fixation.     

On temperature and water limitation of net ecosystem productivity: Implementation in the C-Fix model

Monitoring, understanding and modelling carbon emission and fixation fluxes are key actions to guide climate change stakeholders in the application of mitigation strategies. In this study, we use the remote sensing model C-Fix at the local stand scale to improve the integration of algorithms for water and temperature limitation. These new algorithms are applied to estimate net ecosystem productivity in a fully water limited mode.     

Age-structure dependence of the “specific production” in zooplankton populations

This account represents the results of investigations on the production of some zooplankton populations. For comparing different populations the index specific production (the production rate of the unit of the biomass) is used. The correlation between specific production and age-structure for some populations is described. On the basis of the growth theory of Von Bertalanffy (1938) a theoretical model which helps to explain the relation between specific production and age-structure of the population is proposed.     

Effects of nutrient limitation on toxin production and composition in the marine dinoflagellate Protogonyaulax tamarensis

Toxin production was measured by high pressure liquid chromatography (HPLC) when the marine dinoflagellate Protogonyaulax tamarensis (NEPCC 255) was grown under nitrogen or phosphorus limitation. The major toxins found in P. tamarensis (255) consisted of (N21-SO ₃ ^- )STX (11%), (N21-SO ₃ ^- )NeoSTX (44%), and [(N21-SO ₃ ^- )GTX₂ plus (N21-SO ₃ ^- )GTX₃] (20%). Total toxin content on a per cell basis was high for cultures in log phase (30 to 40 fmol cell^-1) and then decreased to ca 20 fmol cell^-1 as the cultures entered stationary phase. There was a gradual decrease in the toxin content per cell during nitrogen-limited stationary phase to ca 3 fmol cell^-1 or less. Phosphorus-limited cultures showed a markedly different response than nitrogen-limited cultures. Toxin content in P-limited cells dramatically increased at the start of stationary phase, reaching levels 3 to 4 times that observed in control and nitrogen-limited cultures. These results cannot be explained by changes in the average cell volume. Eventhough dramatic effects on the total toxin concentration were observed in response to nutrient limitation (N or P), the toxin composition (on a percent basis) remained constant. This suggests that the individual toxin composition of a given isolate is a fixed genetic trait and not a transient response to changing environmental factors.     

Increased carbon dioxide availability alters phytoplankton stoichiometry and affects carbon cycling and growth of a marine planktonic herbivore

Rising levels of CO₂ in the atmosphere have led to increased CO₂ concentrations in the oceans. This enhanced carbon availability to the marine primary producers has the potential to change their nutrient stoichiometry, and higher carbon-to-nutrient ratios are expected. As a result, the quality of the primary producers as food for herbivores may change. Here, we present experimental work showing the effect of feeding Rhodomonas salina grown under different pCO₂ (200, 400 and 800 μatm) on the copepod Acartia tonsa. The rate of development of copepodites decreased with increasing CO₂ availability to the algae. The surplus carbon in the algae was excreted by the copepods, with younger stages (copepodites) excreting most of their surplus carbon through respiration and adult copepods excreting surplus carbon mostly as DOC. We consider the possible consequences of different excretory pathways for the ecosystem. A continued increase in the CO₂ availability for primary production, together with changes in the nutrient loading of coastal ecosystems, may cause changes in the trophic links between primary producers and herbivores.     

Sex-specific temperature dependence of foraging and growth of intertidal snails

Predicting the biological impacts of climate change requires an understanding of how temperature alters organismal physiology and behavior. Given differences in reproductive physiology between sexes, increases in global temperature may be experienced differently by the males and females of a species. This study tested for sex-specific effects of increased air temperature on foraging, growth, and survival of an intertidal snail, Nucella ostrina (San Juan Island, Washington, 48–30′44″N, 123–08′43″W). Snails exhibited periodic peaks in foraging. Subjecting snails to elevated low tide air temperatures did not alter the timing or magnitude of this pattern. Despite similar temporal patterns in foraging, females foraged more than males, even when the risk of thermal stress was high. While males and females appear to have a similar body temperature threshold for optimal growth, females were more likely to cross that threshold resulting in a loss of body mass when exposed to daily increases in air temperature. These results suggest that the consequences of a warming climate in the short term may be different for males and females of N. ostrina, but also imply longer-term costs of reduced reproductive output, abundance, and distribution of this ubiquitous intertidal predator. Generally, this study points to the possible significance of sex-specific responses in an increasingly warm world.     

A peaked function for modeling temperature dependence of plant productivity

We suggests that temperature response of plant productivity can be modeled by the Arrhenius function modified to describe the effect of temperature on enzyme activity: G_A(T) = 2f(T)/(1 + f²(T)), where f(T) = exp(E_a/RT_opt − E_a/RT), R the universal gas constant, E_a the activation energy and T_opt is the optimal temperature. In common with other functions used for modeling the temperature response of plant productivity, the curve of function G is almost symmetrical and bell-shaped. The special convenience of G_A is that it relates the width of the “bell” to thermodynamic concepts, such as activation energy of chemical reactions converting carbon dioxide and water to carbohydrates.     

Effects of detrital non-native and native macroalgae on the nitrogen and carbon cycling in intertidal sediments

The decay of non-native and native seaweed mixing may modify sediment biogeochemistry and organic matter transfers within benthic food webs according to their composition and biomass. The non-native species Sargassum muticum was deliberately added to the sediment of an intertidal sandflat at different biomass and mixed to the native species Ulva sp. and Fucus vesiculosus. The sediment porewater was then ¹³C and ¹⁵N enriched to test whether both detrital diversity and biomass influenced the transfer of porewater carbon and nitrogen to the sediment and to the macrofauna consumers. More ¹⁵N-nitrogen was mobilized to sediments and macrofauna when the 3-species detrital mixing was buried, probably because this mixing provided species-specific compounds such as polyphenols due to the presence of S. muticum and F. vesiculosus, as well as large amounts of nitrogen due to the presence of Ulva. Our study revealed the importance of detrital diversity and non-native seaweeds for the nitrogen cycling in the benthic food web.     

Microbial interactions with the cyanobacterium Microcystis aeruginosa and their dependence on temperature

Associated heterotrophic bacteria alter the microenvironment of cyanobacteria and potentially influence cyanobacterial development. Therefore, we studied interactions of the unicellular freshwater cyanobacterium Microcystis aeruginosa with heterotrophic bacteria. The associated bacterial community was greatly driven by temperature as seen by DNA fingerprinting. However, the associated microbes also closely interacted with the cyanobacteria indicating changing ecological consequence of the associated bacterial community with temperature. Whereas concentration of dissolved organic carbon in cyanobacterial cultures changed in a temperature-dependent manner, its quality greatly varied under the same environmental conditions, but with different associated bacterial communities. Furthermore, temperature affected quantity and quality of cell-bound microcystins, whereby interactions between M. aeruginosa and their associated community often masked this temperature effect. Both macro- and microenvironment of active cyanobacterial strains were characterized by high pH and oxygen values creating a unique habitat that potentially affects microbial diversity and function. For example, archaea including ‘anaerobic’ methanogens contributed to the associated microbial community. This implies so far uncharacterized interactions between Microcystis aeruginosa and its associated prokaryotic community, which has unknown ecological consequences in a climatically changing world.     

Nutrient cycling between the water column and a marine sediment. I. Organic carbon

The carbon flow through the sediments at a station located in 18.3 m of water off the Scripps Institution of Oceanography, San Diego, California (USA) was determined. The parameters studied [and their mean rates of input (+) or output (-) to the benthos] were macro-detritus (+0.028 gC m^-2day^-1), fallout of particulate debris (+3.3 gC m^-2day^-1), benthic net photosynthesis during the day (-0.06 gC m^-2 daylight period^-1), burial (0 gC m^-2day^-1), benthic respiration at night (-0.28 gC m^-2 night period^-1), and resuspension (-3.0 gC m^-2day^-1). Resuspension of sediment at this station was found to have a controlling effect on the sediment organic carbon content. Benthic photosynthesis was able to provide 79% of the organic carbon required by the benthos for respiration during the daylight hours. A carbon-flow diagram linking together all of the above measurements is presented.     

Energetics of Euphausia pacifica. I. Effects of body carbon and nitrogen and temperature on measured and predicted production

Laboratory production during the life span of Euphausia pacifica was measured directly (as the sum of growth, molting and reproduction) and indirectly (as assimilation minus metabolism and leakage) to test the hypothesis that weight-specific production is a constant for all sizes. Euphausiids were collected in Puget Sound, Washington State, USA, from September 1973 to March 1978. Equations were determined (in terms of carbon and nitrogen at 8° and 12° C) expressing the relationships between body weight and the daily rates of growth, molting, reproduction, ingestion and metabolism. The allometric equation (R=aW ^b ) best related body weight (W) to the rate (R) for growth, molting, ingestion, respiration and excretion for life stages from late larvae through adults. As predicted by the original above hypothesis, the weight-specific coefficient (b) was close to 1.0 for ingestion and excretion; in contrast, b was 0.62 for growth, and 0.77 to 0.85 for molting and respiration. The Q₁₀ s also varied: 3.5 for growth, 2.4 for molting, about 3.0 for ingestion, and 2.0 for respiration and excretion. Assimilation efficiencies, for all weights and at both temperatures, were 81.3% of carbon and 85.9% of nitrogen ingested. The relationships between rate and body weight of early larvae for growth and molting were linear, as was the relationship for reproduction in adults. Weight-specific production was higher by I to 2% at 12° than 8° C for all life stages, and was 2 to 4% for carbon and 2 to 6% for nitrogen in adults, but 13 to 17% for carbon and 14 to 15% for nitrogen in early furcilia larvae. The null hypothesis was rejected for production measured directly, but would have been accepted if only an indirect measurement of nitrogen production had been considered. Clearly, indirect measurement incorporates all errors of measurement and assumption and makes interpretation difficult.