Implications of Phylogenetic Studies for Conservation of Genetic Diversity in Shiitake Mushrooms

We consider the impact of recent molecular phylogenetic analyses on conservation issues for shiitake mushrooms. Bused on mating compatibility, shiitake has been considered a single species, Lentinula edodes sensu lato . Phylogenetic analyses of ribosomal RNA internal transcribed spacers (Hibbett et al. 1995), however, suggest that shiitake is composed of four distinct lineages. Thus, under a phylogenetic species concept, four species of shiitake should be recognized. A classification of shiitake based on a phylogenetic species concept would convey information about evolutionary relationships and distribution of genetic variation, whereas a classification based on a biological species concept would lack such information. This is a clear case in which new insights into phylogenetic relationships can be used to target areas for conservation action and formulate international agricultural policies. At the heart of our argument is the belief that the basic units of both taxonomy and conservation should be unique evolutionary lineages of organisms identified through phylogenetic studies.     

Invasion, Disturbance, and Competition: Modeling the Fate of Coastal Plant Populations

Abstract:  Wetland habitats are besieged by biotic and abiotic disturbances such as invasive species, hurricanes, habitat fragmentation, and salinization. Predicting how these factors will alter local population dynamics and community structure is a monumental challenge. By examining ecologically similar congeners, such as Iris hexagona and I. pseudacorus (which reproduce clonally and sexually and tolerate a wide range of environmental conditions), one can identify life-history traits that are most influential to population growth and viability. We combined empirical data and stage-structured matrix models to investigate the demographic responses of native ( I. hexagona ) and invasive ( I. pseudacorus ) plant populations to hurricanes and salinity stress in freshwater and brackish wetlands. In our models I. hexagona and I. pseudacorus responded differently to salinity stress, and species coexistence was rare. In 82% of computer simulations of freshwater marsh, invasive iris populations excluded the native species within 50 years, whereas native populations excluded the invasive species in 99% of the simulations in brackish marsh. The occurrence of hurricanes allowed the species to coexist, and species persistence was determined by the length of time it took the ecosystem to recover. Rapid recovery (2 years) favored the invasive species, whereas gradual recovery (30 years) favored the native species. Little is known about the effects of hurricanes on competitive interactions between native and invasive plant species in marsh ecosystems. Our models contribute new insight into the relationship between environmental disturbance and invasion and demonstrate how influential abiotic factors such as climate change will be in determining interspecific interactions.     

Household Location Choices: Implications for Biodiversity Conservation

Abstract: Successful conservation efforts require understanding human behaviors that directly affect biodiversity. Choice of household location represents an observable behavior that has direct effects on biodiversity conservation, but no one has examined the sociocultural predictors of this choice relative to its environmental impacts. We conducted a case study of the Teton Valley of Idaho and Wyoming (U.S.A.) that (1) explored relationships between sociodemographic variables, environmental attitudes, and the environmental impact of household location choices, (2) assessed the potential for small household sizes in natural areas to multiply the environmental impacts of household location decisions, and (3) evaluated how length of residency predicted the environmental attitudes of people living in natural areas. We collected sociodemographic data, spatial coordinates, and land‐cover information in a survey of 416 households drawn from a random sample of Teton Valley residents (95% compliance rate). Immigrants (respondents not born in the study area) with the lowest education levels and least environmentally oriented attitudes lived in previously established residential areas in disproportionately high numbers, and older and more educated immigrants with the most environmentally oriented attitudes lived in natural areas in disproportionately high numbers. Income was not a significant predictor of household location decisions. Those living in natural areas had more environmental impact per person because of the location and because small households (<3 people/household) were 4 times as likely in natural areas as large households. Longer residency in natural areas predicted less environmentally oriented attitudes, suggesting that living in natural areas does not foster more concern for nature. Because populaces are rapidly aging, growing more educated, and potentially growing more environmentally oriented, these patterns are troubling for biodiversity conservation. Our results demonstrate a need for environmentalists to make household location decisions that reflect their environmental attitudes and future research to address how interactions between education level, environmental attitudes, population aging, and household location choices influence biodiversity conservation.     

Tropical Diversity and Conservation

The superior diversity of the tropics is well known and, for the largest marine and continental areas, there appears to be a positive relationship between area and species diversity (richness). There are certain portions of the tropics, however, in which species diversity has reached unusually high levels. Such areas apparently function as centers of evolutionary origin. In the ocean the largest of the four tropical shelf regions is the Indo-West Pacific, which stretches almost two thirds of the distance around the globe. Within that expanse by far the greatest diversity is found within the relatively small East Indies Triangle. From the Triangle an evolutionary radiation has reached many other parts of the marine world. On land the Neotropical, Ethiopian, and Oriental biogeographic regions demonstrate very high levels of species diversity. Various major groups of animals and plants have originated in these regions and subsequently spread to other parts of the world. There is no accepted scientific agreement on a conservation strategy for these areas. By focusing our attention on centers of origin, we can save the areas containing species that apparently have the greatest evolutionary potential.     

Conservation of Stream Fishes: Patterns of Diversity, Rarity, and Risk

Abstract: North America has a rich fauna of freshwater fishes which attains greatest diversity in the central and southeastern United States. Many stream fishes have limited ranges and are locally rare and patchily distributed. Local diversity increases downstream and total diversity follows typical species-area relationships. Drainages linked with the large Mississippi system support more species than those of comparable area flowing directly to the sea and rivers isolated by falls have notably few species. The between-drainage component of diversity is large. Threats to this fauna, which are not addressed by management focused on threatened species, include fragmentation of drainage networks by impoundments and homogenization of faunas by interbasin connections and introductions. Conservation efforts require a biogeographic perspective; they should focus on streams of intermediate size (orders 4–6) plus the upstream portion of each drainage and should attempt to maintain total diversity and, inclusively, populations of rare or threatened species.     

Natural Die-Offs of Large Mammals: Implications for Conservation

The viability of populations is a central concern of biological conservation. The occurrence of catastrophic die-offs may greatly reduce the long-term viability of populations. Theoretical extinction models and viability analyses require information on the frequency of die-offs and on the distribution of die-off severities. A review of literature identified 96 natural die-offs in large mammal populations, with a die-off being defined as a peak-to-trough decline in estimated population numbers of at least 25%. If such die-offs are common, population viability analyses that ignore them may be overly optimistic. The severities of the natural die-offs of large mammals presented here are not uniformly distributed. There is a relative overabundance of die-offs in the 70–90% range, and an underabundance of die-offs greater than 90%. This may indicate the presence of buffers against population extinction. The reported causes of large mammal die-offs were significantly related to trophic level: herbivore die-offs were more often attributed to starvation, while carnivore die-offs were more often attributed to disease. Populations subject to large-scale phenomena such as drought and severe winters may not be protected from die-offs by population subdivision. On the other hand, populations subject to catastrophic disease epidemics may be protected by subdivision, and threatened by corridors between conservation areas and by translocation efforts.     

Succession and Disturbance in Sandhills Vegetation: Constructing Models for Managing Biological Diversity

Abstract: The Centennial Sandhills of southwest Montana support a mosaic of shrub-dominated vegetation in various stages of succession. The persistence of rare plants and plant communities depends on the presence of both early and late seral vegetation. Disturbances by fire, grazing, and burrowing are important processes opposing plant succession and influencing vegetation dynamics. We sampled vegetation in wind erosion (blowout), deposition, and stabilized sites on upper and lower slopes. Canonical correspondence analysis was employed to describe vegetation changes that occur during succession as soil organic matter and plant canopy cover increase and bare soil decreases. We used information on the effects of fire, ungulate grazing, and pocket gopher (  Thomomys talpoides ) burrowing, and our empirically derived successional sequence, to develop a model of sandhills vegetation dynamics operating at local and regional scales. The model suggests that fire followed by intense ungulate grazing may be the only way to restore early seral vegetation to areas of low topographic relief. In areas of high topographic relief, restoring presettlement fire frequency should be adequate to maintain pocket gopher habitat and thus a high proportion of early seral vegetation. These hypotheses should be tested through a process of adaptive management aimed at sustaining a mosaic of early and late seral vegetation capable of supporting the full spectrum of native species.     

Biogeography of Recently Extinct Marine Species: Implications for Conservation

At least fifteen marine and coastal animal species have become extinct since the end of the Pleistocene. Analyses of the number of marine biogeographical provinces occupied by these species show that, contrary to the prevailing view that extinction is usually associated with a small range, at least five species (33%) had large ranges encompassing parts of two or more provinces. At least eight species occurred in areas that served as geographical refuges for taxa during the Pliocene and early Pleistocene. These refuges, in which primary planktonic productivity is generally very high, include the northwestern Atlantic and North Pacific. Extinctions in the northwestern Atlantic (four species) may be partly responsible for the subsequent success of human-introduced species in subtidal and open-coast intertidal habitats. Regions of high productivity deserve priority among marine areas to be protected from overexploitation and habitat destruction.     

Local Population Dynamics in Metapopulation Models: Implications for Conservation

Abstract: Habitat fragmentation and the division of populations into spatially separated units have led to the increasing use of metapopulation models to characterize these populations. One prominent model that has served as a heuristic tool was introduced by Levins and is based on a collection of simplifying assumptions that exclude information on the dynamics and spatial distribution of local populations. Levins's and similar models predict the proportion of occupied habitat patches at equilibrium and the conditions needed to avoid total extinction. There are many obvious concerns about using such models, including how realistic alterations might change the predictions and whether occupancy has any relationship to population-level processes. Although many of the assumptions of these simple models are known to be unrealistic, we do not know how the assumptions affect model predictions. We simulated a metapopulation, and our results show that assumptions such as homogeneity of habitat patches, random migration among patches, equivalent extinction probabilities in all patches, and a large number of patches can lead to large overestimations of habitat occupancy. But when we explicitly modeled the underlying population dynamics within each patch, we found (1) that there was a strong correlation between proportion of occupied patches and total metapopulation size and (2) that the distribution of individuals among patches was relatively insensitive to model assumptions. Thus, our results show that although realistic modifications will change model predictions for occupancy, occupancy and population trends will be correlated. These correlations between occupancy and population size suggest that occupancy models may have some utility in conservation applications.     

Environmental Dependency of Inbreeding Depression: Implications for Conservation Biology

Inbreeding depression is environmentally dependent, such that a population may suffer from inbreeding depression in one environment but not another. We examined the phenotypic responses of 35 inbred ( F = 0.672) lineages of the red flour beetle Tribolium castaneum in two different climatic environments. We found a significant environmental effect on males but not females. More important, we found that the rank fitness order of lineages differs between environments; lineages of high fitness in one environment may have low fitness in another environment. This change in rank is evident in a significant genotype-by-environment interaction for inbreeding depression for both females and males. These results suggest that even if we know the average environmental effect of inbreeding depression in a population, for any particular lineage measurements of inbreeding depression in one environment may not predict the level of inbreeding depression in another environment. Conservation biologists need to be aware of the environmental dependency of inbreeding depression when planning wildlife refuges or captive propagation programs for small populations. Ideally, captive propagation programs should maintain separate lineages for release efforts. Refuge design programs should consider maintaining a range of habitat types.     

Conservation Businesses and Conservation Planning in a Biological Diversity Hotspot

The allocation of land to biological diversity conservation competes with other land uses and the needs of society for development, food, and extraction of natural resources. Trade‐offs between biological diversity conservation and alternative land uses are unavoidable, given the realities of limited conservation resources and the competing demands of society. We developed a conservation‐planning assessment for the South African province of KwaZulu‐Natal, which forms the central component of the Maputaland–Pondoland–Albany biological diversity hotspot. Our objective was to enhance biological diversity protection while promoting sustainable development and providing spatial guidance in the resolution of potential policy conflicts over priority areas for conservation at risk of transformation. The conservation‐planning assessment combined spatial‐distribution models for 646 conservation features, spatial economic‐return models for 28 alternative land uses, and spatial maps for 4 threats. Nature‐based tourism businesses were competitive with other land uses and could provide revenues of >US$60 million/year to local stakeholders and simultaneously help meeting conservation goals for almost half the conservation features in the planning region. Accounting for opportunity costs substantially decreased conflicts between biological diversity, agricultural use, commercial forestry, and mining. Accounting for economic benefits arising from conservation and reducing potential policy conflicts with alternative plans for development can provide opportunities for successful strategies that combine conservation and sustainable development and facilitate conservation action. Negocios de Conservación y Planificación de la Conservación en un Sitio de Importancia para la Biodiversidad     

Biological, Conservation, and Ethical Implications of Exploiting and Controlling Wolves

The widespread claim that wolf populations can withstand 25–50% or greater annual reductions without major biological consequences is based primarily on the observation that populations often maintain their size from year to year as harvest or control continues or recover within a few years afterward. This emphasis on numerical status overlooks the likelihood of major, lingering impacts on the size, number, stability, and persistence of family-group social units, on reproductive, hunting, and territorial behavior, on the role of learning and related traditions, on within- and between-group patterns of genetic variation, and on overall mortality rates. The tendency of biologists and agencies in northern North America to promote wolf harvests that are four to eight times greater than ungulate harvests, in accord with the wolf versus ungulate difference in reproductive rates but contradictory to a broad array of differences in social organization and related behavior, is reason enough to question the logic of this prevailing management view. True sustained-yield management requires more emphasis on qualitative biological features to determine the extent to which wolves and other species with evolutionary histories as predators rather than as prey should be harvested. Most recent government-sponsored wolf control programs and proposals, including sterilization, relocation, and "redirected" killing, have been based on questionable claims about ungulate or livestock problems and have not adequately considered potential biological costs (especially to the target wolf populations), benefits, or management alternatives. The high sentience of wolves justifies overlapping biological-ethical concerns about such programs and especially about the heavy, indiscriminate, deceptively reported public hunting and trapping of wolves that is currently permitted throughout most of Alaska (U.S.A.)—including in national parks—and elsewhere.     

Conservation of Insect Diversity: a Habitat Approach

Abstract: Neither time nor resources exist to design conservation plans for every species, particularly for little-studied, noncharismatic, but ecologically important taxa that make up most of biodiversity. To explore the feasibility of basing conservation action on community-level biogeography, we sampled a montane insect community. We addressed three issues: (1) the appropriate scale for sampling insect communities; (2) the association of habitat specialization—perhaps a measure of extinction vulnerability—with other ecological or physical traits; and (3) the correlation of diversity across major insect groups. Using malaise traps in Gunnison County, Colorado, we captured 8847 Diptera (identified to family and morphospecies), 1822 Hymenoptera (identified to morphospecies), and 2107 other insects (identified to order). We sampled in three habitat types—meadow, aspen, and conifer—defined on the basis of the dominant vegetation at the scale of hundreds of meters. Dipteran communities were clearly differentiated by habitat type rather than geographic proximity. This result also holds true for hymenopteran communities. Body size and feeding habits were associated with habitat specialization at the family level. In particular, habitat generalists at the family level—taxa perhaps more likely to survive anthropogenic habitat alteration—tended to be trophic generalists. Dipteran species richness was marginally correlated with hymenopteran species richness and was significantly correlated with the total number of insect orders sampled by site. Because these correlations result from differences in richness among habitat types, insect taxa may be reasonable surrogates for one another when sampling is done across habitat types. In sum, community-wide studies appear to offer a practical way to gather information about the diversity and distribution of little-known taxa.     

Mammal Diversity and Conservation in the Selva Lacandona, Chiapas, Mexico

The Selva Lacandona region of Chiapas, Mexico, has high biodiversity, represents the last large portion of tropical rainforest in México, and faces imminent destruction. Through fieldwork and literature searches I found a total of 112 mammal species (including 17 Middle-American endemics) on the Lacandona's 331,200 ha Montes Azules Biosphere Reserve. This inventory plus those from eight additional Neotropical localities show local mammal species richness in the Neotropics to be in the range of 70–116 species. Richness is primarily correlated with the amount of annual rainfall, but within rainforest areas species richness is probably not correlated with rainfall, latitude, altitude, or area size. Rather, above a certain limit of rainfall and below a critical level of latitude and altitude, mammal species richness seem to reach an asymptotic maximum. Areas covered with tropical rainforest and with a well-known, relatively intact fauna have about 112–116 mammal species. In the Montes Azules Reserve most mammals (57%) are bats. The most heavily occupied feeding guilds are frugivores/herbivores and insectivores/omnivores. Large species and carnivores appear most vulnerable to local extinction. Montes Azules (and thus the Selva Lacandona) is especially noteworthy because (1) it contains a greater proportion of species facing conservation problems than expected from a random draw of Mexican mammals; (2) it is probably the most diverse ecosystem in Mexico; (3) many species sustain their only Mexican populations in this area; and (4) it is the largest remnant of tropical rainforest in Mexico and is part of the largest expanse of that vegetation type in Central America.