Modelling the responses of the Lagoon of Venice ecosystem to variations in physical forcings

A Finite Element Ecological Model for the Lagoon of Venice (VELFEEM) has been used to test the responses of the Lagoon of Venice ecosystem to variations in physical conditions.The model is obtained by coupling a finite element hydrodynamic model, that computes the velocity fields of water, an energetic model to compute the water temperature fields, and an ecological model that simulates the dynamic of phytoplankton, zooplankton, nutrients (ammonia, nitrate and phosphate) organic detritus (organic nitrogen, organic phosphorous and CBOD) and dissolved oxygen.The transport model is a two-dimensional barotropic finite element model which allows for a better resolution of the lagoon morphology.The ecological model has been developed by starting from the ecological module EUTRO of WASP (Water Analysis Simulation System released by US EPA), and by adapting it to the peculiarity of the Lagoon of Venice.A reference condition has been identified by running a 1-year simulation under climatologic condition. Then, the sensitivity to physical forcing (tide and wind) and to the input of macronutrients has been investigated, by comparing model predictions of spatial and temporal evolution of major state variables and of an aggregate index of Water Quality Trophic Index (TRIX).     

Erratum to “Modelling the responses of the Lagoon of Venice ecosystem to variations in physical forcings”: [Ecol. Model. 170 (2003) 265–289]

A Finite Element Ecological Model for the Lagoon of Venice (VELFEEM) has been used to test the responses of the Lagoon of Venice ecosystem to variations in physical conditions.The model is obtained by coupling a finite element hydrodynamic model, that computes the velocity fields of water, an energetic model to compute the water temperature fields, and an ecological model that simulates the dynamic of phytoplankton, zooplankton, nutrients (ammonia, nitrate and phosphate) organic detritus (organic nitrogen, organic phosphorous and CBOD) and dissolved oxygen.The transport model is a two-dimensional barotropic finite element model which allows for a better resolution of the lagoon morphology.The ecological model has been developed by starting from the ecological module EUTRO of WASP (Water Analysis Simulation System released by US EPA), and by adapting it to the peculiarity of the Lagoon of Venice.A reference condition has been identified by running a 1-year simulation under climatologic condition. Then, the sensitivity to physical forcing (tide and wind) and to the input of macronutrients has been investigated, by comparing model predictions of spatial and temporal evolution of major state variables and of an aggregate index of Water Quality Trophic Index (TRIX).     

Modelling spatial distribution of hard bottom benthic communities and their functional response to environmental parameters

In this study we analyzed and modelled spatial distribution of hard bottom benthic communities in the Lagoon of Venice, and used the model to derive functional response of these communities to changing environmental conditions.     

Modelling partitioning and distribution of micropollutants in the lagoon of Venice: a first step towards a comprehensive ecotoxicological model

The model presented in this paper integrates a large amount of recent and ad hoc collected data concerning environmental contamination from micropollutants in the lagoon of Venice. This model represents the first step in setting up of an ecotoxicological model for the Venice lagoon, to simulate fate of contaminants from abiotic matrices to organisms. Distribution and partitioning of organic and inorganic contaminants are modelled by a two-dimensional model, based both on deterministic and empirical submodels and adapted to a large spectrum of different substances (polychlorinated dibenzo-dioxins/polychlorinated dibenzo-furans (PCDD/F), polychlorinated biphenyls (PCBs), heavy metals). The model was successfully calibrated on a wide set of experimental data. Sensitivity analysis showed that the model is generally not very sensible to parameters values but it is sensible to external conditions (e.g., pollutants loads). Distribution of dissolved and total concentrations of contaminants was obtained for a series of PCDD/F and PCBs congeners and for eight heavy metals. These distributions represent integrated information on ecosystem health, complementary to monitoring data and they are useful to be used for comparisons with various water quality criteria. Simulation scenarios under different external conditions are proposed as examples of use of the model for management purposes.     

Salt-marshes as emergent novelties in the Venice Lagoon

It has been observed in Venice Lagoon that salt-marshes have appeared and developed as a consequence of the presence of artificial or biological confinements, maintaining separation domains in the hydrodynamic wave and tidal flow field.     

Annelids of a west African estuarine system

Annelids collected from eight stations in the western part of Lagos Lagoon between May, 1996 and February, 1998 were reported. Rainfall, salinity and sediment type influenced distribution of annelids, which were either dry season species, wet season species or euryhaline species. A total of fifty-five species were collected, thirty-one not recorded in earlier studies. Pollution indicators, Polydora sp., Capitella capitata, Nereis sp. and Tubifex sp. were collected in both dry and wet seasons.     

Tisbe (Copepoda: Harpacticoida) species from the Lagoon of Venice. I. Seasonal fluctuations and ecology

Distribution and abundance of Tisbe species were studied throughout a period of 3 years at 3 stations in the Lagoon of Venice (Italy). At 2 other stations samples were taken occasionally, as also at the Lido station (open sea). Twelve species may be considered as common inhabitants of the lagoon, and 3 species appear to be occasional transients, compared to the 9 species found at the Lido. A comparison of the physical data shows that the stations were similar in temperature and salinity, but differed primarily in pH values, sediment characteristics, algal substratum and faunal benthic community. The fact that remarkable differences in species composition and distribution of Tisbe could be observed between the various parts of the lagoon and the lagoon and the open sea, indicates that temperature and salinity are not so important for species diversity as are biotic factors. A particularly strong difference existed between samples taken at the bottom and from pilings, which constitute a very special biotope for the benthic communities in the lagoon and seem to be a preferred habitat for T. lagunaris and T. cucumariae. The data suggest that there is a certain interaction between T. holothuriae and the other species. Whenever T. holothuriae was abundant, the other species were rare, but T. clodiensis, T. dobzhanskii (Stations 1 and 2) and Tisbe sp. (Station 3) attained high relative abundance whenever T. holothuriae decreased considerably in number. T. holothuriae represents certainly the hardiest species of the lagoon, displaying a great ability to cope with stress conditions, even those present in the interior lagoon where strong fluctuations in salinity, temperature, pH and oxygen prevail.     

On the detoxification of benthic bivalves contaminated by POPs: insights from experimental and modelling approaches

Rearing benthic bivalves that are contaminated by persistent organic pollutants (POPs) in areas with low pollution levels permits their natural detoxification. Here, we present the results of novel detoxification experiments conducted with the Manila clam (Tapes philippinarum) in the Venice Lagoon; these experiments were conducted both in summer and winter. Measurements of dioxins (PCDD), furans (PCDF), polychlorinated biphenyl (PCB) and hexachlorobenzene (HCB) concentrations in clam flesh over time after their resettlement in cleaner areas allowed for determining the minimum time required to reach safe toxicity levels. Moreover, dioxin fingerprint dynamics demonstrated successful detoxification from industrial contaminants. A simple bioaccumulation/detoxification model applied to the collected data provided for the first time estimation of detoxification rates and half-lives for POP congeners in clam flesh. This work provides a basis for considering natural detoxification as a viable solution for safely exploiting resources otherwise restricted from human consumption due to associated health risks.     

Effect of salinity on survival and growth of blue crab, Callinectes amnicola from Lagos Lagoon, Nigeria

The effect of salinity on the survival and growth of Callinectes amnicola (De Rocheburne) from the Lagos Lagoon, Nigeria was monitored in the laboratory for 22 weeks. The crabs were euryhaline and tolerated a salinity range of 5 to 25 per thousand and had 90% survival at 15 and 20 per thousand. The highest gain in weight (173.0%) and carapace width (56.1%) was obtained at salinity of 15 per thousand. The highest specific growth rate (1.98) was obtained at 15 per thousand, while the lowest specific growth rate (-0.28) was recorded at 35 per thousand. The condition factor of the crabs showed a fairly consistent pattern at the different salinity levels with values ranging from 5.7 to 7.3. Complete moulting was obtained at salinity of 15 per thousand in the 12th week of the experiment. The crab with carapace width of 6.8 cm increased to 8.1 cm (19.1%) after moulting.     

Number and morphology of chromosomes in three geographical populations of Ascidiella aspersa (Ascidiacea)

In contrast with some previous reports, we have found the same number of chromosomes (n=9, 2n=18) for Ascidiella aspersa Müller from the Gulf of Naples, the west coast of Scotland and the Lagoon of Venice. It follows that the hypothesis, that different geographical populations of A. aspersa might possess different chromosome numbers, is no longer tenable. The karyogram of A. aspersa shows 9 pairs of metacentric autosomes. The oocyte bivalents show chiasmata and are characterized by the faintness with which they are stained.This investigation was supported by a grant from C.N.R. for Marine Biology, n. 69.00117 14.43.3.     

Using opportunistic green macroalgae as indicators of nitrogen supply and sources to estuaries.

Nutrient inputs to estuaries are increasing worldwide, and anthropogenic contributions are increasingly complex and difficult to distinguish. Measurement of integrated effects of salinity and nutrient changes simultaneously can help ascertain whether N sources of similar magnitude and stable isotope (sigma15N) signatures are river dominated. We used Enteromorpha spp., an opportunistic macroalga, to obtain integrated measures of salinity, nutrient supply, and nutrient source in estuaries. We outplanted cultured algae in the field along spatial gradients within three southern California estuaries for 24 hours in wet and dry seasons. Tissue was analyzed for potassium (K+) to measure osmoregulatory changes, total nitrogen to examine changes in nutrient supply, and sigma15N to assess nutrient sources. Discrete measures of water salinity correlated with tissue K+ content; however, there was significant variability in the relationship, suggesting that the algae were subject to considerable variation in salinity over a tidal cycle. Tissue total N was not always related to snapshot measures of water column dissolved inorganic nitrogen (DIN), suggesting that integrated measures may be better at capturing the temporal and spatial complexity of nutrient availability. The combination of tissue K+, total N, and sigma15N measures revealed that inflowing rivers delivered N from watershed sources to Mugu Lagoon and Carpinteria Salt Marsh, while both the inflowing river and a mid estuary source were important sources of high sigma15N N in Upper Newport Bay. These experiments revealed complex patterns of supply and sources of N and demonstrate the usefulness of macroalgal indicators over water sampling to detect these patterns.     

Extraction of anthropogenic heavy metals from reduced sediments: Indeterminations due to authigenic sulphides and clay minerals

A mineralogical and micro‐chemical study was performed by X‐ray diffraction and SEM/EDS techniques in a reduced sediment sample from the Venice Lagoon to investigate selectivity and significance of two widely used acid extractions (cold IN HCl and hot 8N HNO₃) for the evaluation of anthropogenic metal concentrations. Hydrochloric acid determines an incomplete and variable solubilization of authigenic iron sulphides, yielding a partial extraction of the associated metals (Hg, Mn, Zn and less Ni and Cu). Nitric acid is effective in solubilizing all sulphides, however, it leads to an overestimate of the anthropogenic metal content since it partially dissolves the lattice of some clay‐minerals, particularly chlorites. When these acid extractions are used to asses metal pollution in aquatic ecosystems, the possible over or under‐estimate of the anthropogenic concentration must be taken into account, considering the mineralogical composition of the sediment.     

Oil pollution monitoring in the Lagoon of Venice using the mussel Mytilus galloprovincialis

Gas chromatographic analyses of mussels, Mytilus galloprovincialis, from different areas of the Lagoon of Venice show that these organisms contain a very complex mixture of hydrocarbons attributable to fuel oil contamination. The measured amounts normally range from 0.8 to 8.7 mg/100 g wet weight, but values as high as 22.0 mg/100 g have been recorded. This high value indicates a saturation limit for these organisms which is considerably higher than those values normally found in mussels from the lagoon. The aliphatic hydrocarbon levels in mussels are related to distance from pollution sources and to the degree of exchange between the sea and the area sampled. On the basis of this relationship between overall hydrocarbon pollution load and level of contamination of M. galloprovincialis, it appears that this bivalve might be effectively utilized as a self-integrating monitoring index of oil pollution in the wasters of the lagoon.     

The Extended Kalman Filter (EKF) as a tool for the assimilation of high frequency water quality data

The Extended Kalman Filter (EKF) was applied to the analysis of high frequency field measurements of dissolved oxygen (DO), water temperature, salinity, collected by multiparametric sensors in the lagoon of Venice. This paper focuses on the practical aspects of the implementation of the EKF as a data assimilation technique and does not deal with the problems associated with the identification of the model. In this regard, the EKF has proved to be a useful tool for the updating of the estimates of the parameters of a simple DO-chlorophyll model, which can be used for linking the high frequency data to meteorological forcings, such as solar radiation and wind, and to other low frequency measurements of water quality parameters, such as the concentrations of Chlorophyll a and nutrients. The model can subsequently be used as a tool for checking the consistency of all this data, and may also be employed for controlling the quality of the data collected by the multiparametric sensors.     

Metal concentration changes in growing Pacific oysters,Crassostrea gigas,cultivated in Tasmania,Australia

Pacific oyster spat (Crassostrea gigas Thunberg) transferred from the Tamar Estuary to two growing areas in southern Tasmania were monitored for their metal contents over one growing season (1974–1975). Oysters at Pipeclay Lagoon were grown with stick and tray culture while those at Dart Island were cultured with the longline technique. Metal content of the oysters increased with time and the trend was similar to the weight growth curves. Mean dry weights of oysters increased from 0.07 to 1.19 g at Pipeclay Lagoon and from 0.25 to 1.47 g at Dart Island. Metal contents (g) increased at each site, respectively: Fe 57 to 326; 91 to 446; Zn 259 to 6 555; 755 to 5 335; Cd 1.5 to 13.3; 1.9 to 16.3; Cu 26 to 142; 9 to 116; Pb 1.9 to 11.9; 0.6 to 3.8. Concentration curves generally showed a downward trend with time. The relationships of metal concentrations with weight did not differ from sample to sample at a site nor did they differ at one site compared with the other. The only exception was lead, which showed no relationship of concentration with weight at Pipeclay Lagoon and a negative one at Dart Island. It is postulated that higher winter concentrations of metals in the oysters were linked with greater solubility of metal ions in lower salinity water.     

Interaction of alongshore sediment transport and habitat conditions at Laguna La Mancha, Veracruz, Mexico

The habitats of La Mancha Lagoon, located midway along the coast of Veracruz, Mexico, are responding to the change of sediment supply reaching its primary inlet at the Gulf of Mexico. Until several decades ago, an abundant alongshore supply of sediment created a periodic opening and closing of the La Mancha inlet. The hydrologic regime of the lagoon consisted of raised water level and lower salinity during the closures, whereas the open inlet favored lower water level, higher salinity, and sediment accumulation in the flood tidal delta. Currently, diminished alongshore sediment supply has affected the inlet morphology and the discharge regime. Associated with the reduced sediment supply, the inlet is open longer in its periodic cycle, the water level variation is reduced, the salinity contrasts are reduced, and the rate of sedimentation in the flood-tide delta is increased. This combination of alterations to the inlet area is changing the flooding regime and affecting the conditions in a very well-developed mangrove habitat at the lagoon margins as well as conditions within the aqueous portions of the lagoon. Management options produce a conflict between supporting the direction of change or preserving the existing habitats.     

First continuous shipboard δ18O and δD measurements in sea water by diffusion sampling—cavity ring-down spectrometry

Combined measurements of salinity and the oxygen/hydrogen stable isotope composition of marine waters can characterise processes such as freshwater mixing, evaporation, precipitation and sea-ice formation. However, stable isotope data with high spatial and temporal resolution are necessary for a detailed understanding of mixed water bodies with multiple inputs. So far analysis of ??¹⁸O and ??D values in water has been a relatively expensive, laboratory-based technique requiring collection of discrete samples. This has greatly limited the scope and scale of field research that can be undertaken using stable isotope analysis. Here, we report the first continuous shipboard measurements of ??¹⁸O and ??D values in water by diffusion sampling-cavity ring-down spectrometry. Combined with continuous salinity recordings, a data set of nearly 6,000 measurements was made at 30-s intervals during a 3-day voyage through the Great Barrier Reef Lagoon. Our results show that continuous shipboard measurement of ??¹⁸O/??D values provides additional discriminatory power for assessing water mass formation processes and histories. Precise identification of river plumes within the Great Barrier Reef Lagoon was only possible because unique ??¹⁸O/??D?Csalinity relationships of individual plumes were measured at high spatial and temporal resolution. The main advantage of this new technique is the ability to collect continuous, real-time isotope data at a small fraction of the cost of traditional isotope analysi s of discrete samples. Water ??¹⁸O and ??D values measured by diffusion sampling-cavity ring-down spectrometry and laboratory-based isotope ratio mass spectrometry have similar accuracy and precision.     

Measuring q-bits in three-trophic level systems

The use of quantum information has been proposed as an approach to deal with biological data (Piqueira, J.R.C., Serboncini, F.A., Monteiro, L.H.A., 2006. Biological models: measuring variability with classical and quantum information. J. Theor. Biol. 242 (2), 309–313). Using three-trophic level systems as examples, we show how to model population data by expressing the system states with q-bits. The system time evolution is given by the state transition matrices which relate the states to successive time intervals. It is a complementary way of looking at the problem which is usually modeled with deterministic differential equations. This is possible because the dynamics of interacting populations in three-trophic level systems is a problem with several coupled variables and, consequently, complex dynamical behaviors seem to result. The non deterministic dynamics generated by the state transition matrices is supposed to model the biological system as a whole, with real data expressing even the global effects of small disturbances in the ecological parameters.     

Testing the robustness of primary production models in shallow coastal areas: a case study

In this paper we investigate the robustness of a dynamic model, which describes the dynamic of the seagrass Zostera marina, with respect to the inter-annual variability of the two main forcing functions of primary production models in eutrophicated environments. The model was previously applied to simulate the seasonal evolution of this species in the Lagoon of Venice during a specific year and calibrated against time series of field data. In the this paper, we present and discuss the results which were obtained by forcing the model using time series of site-specific daily values concerning the solar radiation intensity and water temperature. The latter was estimated by means of a regression model, whose input variable was a site-specific time series of the air temperature. The regression model was calibrated using a year-long time series of hourly observations. The Z. marina model was first partially recalibrated against the same data set that was used in the original paper. Subsequently, the model was forced using a 7-year-long time series of the driving functions, in order to check the reliability of its long-term predictions. Even though the calibration gave satisfactory results, the multi-annual trends of the output variables were found to be in contrast with the observed evolution of the seagrass biomasses. Since detailed information about the air temperature and solar radiation are often available, these findings suggest that the testing of the ecological consistency of the evolution of primary production models in the long term would provide additional confidence in their results, particularly in those cases in which the scarcity of field data does not allow one to perform a formal corroboration/validation of these models.     

Modelling the interactions between nutrients and the submersed vegetation in the Orbetello Lagoon

The main problem in the Orbetello Lagoon is the control of the submersed vegetation, both in biomass and inventory, to manage a problematical coexistence between macroalgae and macrophytes. While macroalgae are liable to cause dystrophic crises, macrophytes oxygenate and stabilise the sediment and thus control the nutrient flux into the water. A mathematical model was required by the Orbetello Lagoon Managerial Office to predict the development of both groups and test the actions to favour macrophytes over macroalgae, in the context of a decision support system. This model, developed for this need, takes into account the interactions between nutrients and the submersed vegetation in a 2D spatial context including a hydrodynamic model for the water movements and an ecological model describing the interactions between nutrients and the submersed vegetation. In the spatial grid the model operates with two interlocked modules: each cell implements the kinetics of nutrients, vegetation and their interactions, running on an hourly basis to keep track of the circadian cycles, whereas an advection/diffusion mechanism running on a daily basis exchanges information among all the grid cells. The model output consists of daily variations in nutrient concentrations and vegetation biomass showing the relative abundance of either group as a consequence of environmental conditions. After a sensitivity assessment, the model has been calibrated with data from the Orbetello Lagoon, where it can now be used as a forecasting tool to predict the development of vegetation and the relative advantage that macrophytes may have upon macroalgae.