Microbial RNA and DNA synthesis in marine sediments

A technique for measuring rates of RNA and DNA synthesis in sedimentary microbial communities has been adapted from methods developed for marine and freshwater microplankton research. The procedure measures the uptake, incorporation and turnover of exogenous [2, ³H]-adenine by benthic microbial populations. With minor modification, it is applicable to a wide range of sediment types. Measurement of nucleic acid synthesis rates are reported from selected benthic marine environments, including coral reef sediments (Kaneohe Bay, Oahu, Hawaii), intertidal beach sands (Oahu and southern California) and California borderland basin sediment (San Pedro Basin), and comparisons are made to selected water-column microbial communities. Biomass-specific rates of nucleic acid synthesis in sediment microbial communities were comparable to those observed in water-column assemblages (i.e., 0.02 to 2.0 pmol deoxyadenine incorporated into DNA [ng ATP]^-1 h^-1 and 0.2 to 8.9 pmol adenine incorporated into RNA [ng ATP]^-1 h^-1). DNA synthesis rates were used to calculate carbon production estimates ranging from 2 g C cm^-3 h^-1 in San Pedro Basin sediment (880 m water depth) to 807 g C cm^-3 h^-1 in coral reef sediment from the Kaneohe Bay. Microbial community specific growth rate, (d^-1), estimated from DNA synthesis rates in surface sediments ranged from 0.1 in San Pedro Basin to 4.2 in Scripps Beach (La Jolla, California) intertidal sand.     

Effect of light quality on photosynthesis of the reef coral Montipora verrucosa

Pieces of the reef coral Montipora verrucosa (Lam.), collected from Kaneohe Bay, Oahu, Hawaii in 1982, were grown in four low-light treatments (11% sunlight): blue, green, red and the full spectrum of photosynthetically active radiation (PAR); and at high-intensity full PAR (90% sunlight). These acclimated corals were then tested for photosynthetic ability in blue, green, red, and white light. The photosynthetic parameters that were measured were; ligh-saturated photosynthetic rate, the initial slope of the photosynthesis/irradiance curve, the light intensity where these two lines crossed, and dark respiration. While acclimation intensity had a pronounced effect, the results also showed that the color of the acclimation treatment influenced the photosynthetic responses of the corals. The color of the light used in the measurements of photosynthesis had much less effect on the photosynthetic responses of the corals.Contribution No. 729 of the Hawaii Institute of Marine Biology     

Effects of ambient levels of solar ultraviolet radiation on zooxanthellae and photosynthesis of the reef coral Montipora verrucosa

Paired flat plates of the hermatypic coral Montipora verrucosa from Kaneohe Bay, Oahu, Hawaii, were acclimated to photosynthetically active radiation (PAR) only and to full sunlight (PAR+UV) for several weeks in the summer of 1990. After the acclimation period, photosynthesis, both in PAR-only and PAR+UV as well as dark respiration were measured. Levels of the UV-absorbing compounds, S320, density of zooxanthellae, and chlorophyll a concentration were determined. Corals acclimated in PAR+UV had higher levels of the UV-protective compounds and lower areal zooxanthellae densities than corals acclimated in PAR-only. Chlorophyll a per unit volume of coral host and per algal cell did not differ between corals from the two acclimation treatments. Corals acclimated to PAR+UV displayed higher photosynthesis in full sunlight than corals acclimated to PAR-only, but when photosynthesis was measured in the light regime to which the corals had been acclimated, there were no differences in photosynthesis. Dark respiration was the same for corals from the two acclimation treatments regardless of the light quality immediately preceding the dark period.Contribution No. 902 HIMB     

Responses of marine fouling communities to sewage abatement in Kaneohe Bay,Oahu, Hawaii

The development of marine fouling communities was followed as part of a sewage abatement study in Kaneohe Bay (Oahu, Hawaii). Panels immersed near the outfall during sewage discharge were dominated by dense mats of blue-green algae and diatoms. This mat was significantly lighter at this station when sewage did not flow into the bay, and it never developed on panels within the same sector of the bay but away from the influence of the outfall. Taxonomic diversity, and the frequency of filamentous algae and the serpulidHydroides elegans were reduced near the outfall during discharge. It is suggested that this reduction in diversity and abundance of certain key foulers is due to competitive exclusion by the dense blue-green and diatom mats, and is not a direct effect of the sewage effluent.     

Current and historic distribution and abundance of the inarticulated brachiopod, <Emphasis Type="Italic">Lingula reevii</Emphasis> Davidson (1880), in Kaneohe Bay,Oahu, Hawaii,USA

The inarticulated brachiopod, Lingula reevii Davidson (1880) is a filter-feeding invertebrate that burrows vertically in sandy or mixed sediments. Its only recorded occurrence is from Kaneohe Bay, Oahu, Hawaii, southern Japan, and Ambon, Indonesia. Past surveys of Kaneohe Bay populations suggested a distinct decrease in abundance following the diversion of sewage effluent from the bay in 1978/1979. In the summer of 2004 and 2007, visual surveys were conducted in areas of historical L. reevii abundance as well as in areas appearing to have suitable habitat. In 2004, approximately 2,950 m² at 20 sites within the bay were surveyed using quantitative belt transecting methods. A maximum density of 4 Lingula/m² was observed, a decrease from previous maximum estimates of 500 individuals/m² (Worcester, Dissertation, Zoology Department, University of Hawai′i, pp 49, 1969) and 100 individuals/m² (Emig, J Exp Mar Biol Ecol 52:47–61, 1981). When these 20 sites were revisited in 2007, many had fewer or no L. reevii; therefore, broader scale presence/absence surveys were conducted at 16 additional sites in the bay (also surveyed in 2004). The highest density of L. reevii found in 2007 was 0.94 individuals/m². The continued decline in abundance of L. reevii in Kaneohe Bay may be due, in addition to decreased organic enrichment from diversion of sewage discharge almost 30 years ago, to the more recent reduction of suitable habitat by the invasion of mat-forming alien algae species.     

Diel movement patterns of the Hawaiian stingray,<Emphasis Type="Italic"> Dasyatis lata</Emphasis>: implications for ecological interactions between sympatric elasmobranch species

The Hawaiian stingray, Dasyatis lata, is a common benthic elasmobranch in nearshore Hawaiian waters. Acoustic telemetry was used to track the movements of seven rays in Kaneohe Bay, Oahu, Hawaii. Rays were tracked continuously over 31-74 h periods. Geographical movements were analyzed to determine space utilization and rate of movement. Rays were found to utilize significantly larger activity spaces at night (0.83ǂ.70 km²) (mean-SD) than during the day (0.12ǂ.15 km²). Mean total activity space for rays tracked was 1.32ǂ.75 km². Rates of movement were also significantly higher at night (0.34ǂ.30 km h^-1) than during the day (0.15ǂ.22 km h^-1). Average straight-line swimming speed was 0.64ǂ.16 km h^-1, with a maximum observed swimming speed of 1.9 km h^-1. Tidal stage had no effect on rate of movement. Comparison with previously published data on juvenile scalloped hammerhead sharks, Sphyrna lewini, in Kaneohe Bay revealed a high degree of overlap in habitat use and time of activity, suggesting possible ecological interactions between these two species.     

Reproductive parameters of female Hawaiian damselfish<Emphasis Type="Italic"> Dascyllus albisella</Emphasis> with comparison to other tropical and subtropical damselfishes

The reproductive ecology of female Hawaiian damselfish Dascyllus albisella (Gill) was studied at Kaneohe Bay, Oahu, Hawaii (21°27'N; 157°47'W) during two peak reproductive seasons (June–September 1997, July–August 1998). In both years, spawning occurred cyclically every 5–7 days, with all spawning in the study area in each cycle concluding within 2–3 days. The study period encompassed 16 spawning cycles in 1997 and 10 cycles in 1998. Some females spawned in almost all cycles, whereas others spawned in as few as one. Mean spawning interval of individual females ranged from 6.4 to 11.7 days in 1997 and from 5.5 to 29.0 days in 1998. Batch fecundity increased exponentially with body length, and ranged from 23,100 to 52,800. Spawning duration increased linearly with body length and ranged from 20 to 286 min. On a single day, large females spawned earlier than small females. Females mated with several different males over a season, but typically mated with only one male on a single spawning day. Female spawning frequency and interval, spawning duration, batch fecundity, as well as diel timing of spawning in D. albisella were comparable to those reported for other large, planktivorous, non-territorial damselfishes.     

Genetic structure of two species of Montipora on a patch reef: conflicting results from electrophoresis and histocompatibility

Spatial patterns of graft acceptance and rejection were different for two species of the coral Montipora from Kaneohe Bay, Hawaii. Electrophoretically distinct tissues were capable of fusing, indicating that clonal identity is not necessarily inferred by acceptance of grafts. For M. dilatata, 18 of 40 cases of fusion were between dissimilar genotypes and for M. verrucosa, 3 of 7 cases. In one case, fusion occurred between genotypes which shared no alleles. A greater understanding of the genetics of invertebrate immunology is required before histocompatibility criteria can be used independently to assess population genetic structure with confidence.     

Genetic population structure of the recently introduced Asian clam,Potamocorbula amurensis,in San Francisco Bay

The genetic population structure of the recently introduced Asian clam, Potamocorbula amurensis, in San Francisco Bay was described using starch gel electrophoresis at eight presumptive loci. Specimens were taken from five environmentally distinct sites located throughout the bay. The population maintains a high degree of genetic variation, with a mean heterozygosity of 0.295, a mean polymorphism of 0.75, and an average of 3.70 alleles per locus. The population is genetically homogeneous, as evidenced from genetic distance values and F-statistics. However, heterogeneity of populations was indicated from a contingency chi-square test. Significant deviations from Hardy-Weinberg equilibrium and heterozygote deficiencies were found at the Lap-1 locus for all populations and at the Lap-2 locus for a single population. High levels of variability could represent a universal characteristic of invading species, the levels of variability in the source population(s), and/or the dynamics of the introduction. Lack of differentiation between subpopulations may be due to the immaturity of the San Francisco Bay population, the general purpose phenotype genetic strategy of the species, high rates of gene flow in the population, and/or the selective neutrality of the loci investigated.     

Energetics,competency, and long-distance dispersal of planula larvae of the coral Pocillopora damicornis

Pocillopora damicornis (Linnaeus) were collected from Enewetak Atoll, Marshall Islands, in 1980–1981) and Kaneohe Bay, Hawaii, in 1982. Their planula larvae contained 17% protein, 70% lipid, and 13% carbohydrate by dry weight. Calculations based on stored energy reserves and daily metabolic expenditure indicate that planulae could survive approximately 100 d and still settle successfully. Competency experiments demonstrated that larvae settled and metamorphosed after 103 d. This period of time is sufficient to allow immigration of larvae from the Central Pacific to the eastern Pacific, and supports the hypothesis of long-distance dispersal of larvae for the origin of present eastern Pacific populations of P. damicornis.     

Influence of size on primary production in the reef coral Pocillopora damicornis and the macroalga Acanthophora spicifera

Size influences the photosynthesis-irradiance (P-I) relationship in colonies of the branched reef-coral Pocillopora damicornis and in intact plants of the branched redmacroalga Acanthophora spicifera. The light saturation constant is proportional to size. Maximum net rate of oxygen production (net photosynthesis) per colony and nocturnal dark oxygen-uptake rate per colony (respiration) increase with increasing size, but the latter increases at a much lower rate. Therefore, the photosynthesis to respiration ratio increases with increasing canopy size. Large increases in chlorophyll per unit reef area also accompany increase in size. The initial slope (alpha) of the chlorophyll-specific P-I curve and assimilation number are inversely related to size. Integrated daytime oxygen production increases with size more rapidly than nighttime oxygen consumption. Consequently, net primary production of an entire colony or plant (or rate per unit area of reef) increases with increasing size of the canopy. Production efficiency also increases with size. The coral is rigid, symmetrical and highly organized. Chlorophyll distribution is more stratified in comparison to the macroalga. The coral shows higher photosynthetic efficiency, as would be expected according to the stratified production model of Odum et al. (1958). This research was conducted on specimens from Kaneohe Bay, Oahu, Hawaii, USA in 1981.     

Spatial and temporal variability in egg production rates of the calanoid copepod Acrocalanus inermis

Egg production rate of the copepod Acrocalanus inermis was measured at 3 stations in south Kaneohe Bay, Hawaii in August 1977 and July–October 1979. The egg production rates were significantly variable spatially, but temporal variability over a time scale of weeks was larger than spatial variability. In three experiments, egg production rates were correlated with ambient concentrations of particulate matter, a crude estimate of food concentration. Most values for egg production rates ranged between 5 and 16.9 eggs female^-1 d^-1.     

Nitrogen- versus phosphorus-limited growth and sources of nutrients for coral reef macroalgae

Recent investigations of nutrient-limited productivity in coral reef macroalgae have led to the conclusion that phosphorus, rather than nitrogen, is the primary limiting nutrient. In this study, comparison of the dissolved inorganic nitrogen:phosphorus ratio in the water column of Kaneohe Bay, Hawaii, with tissue nitrogen:phosphorus ratios in macroalgae from Kaneohe Bay suggested that nitrogen, rather than phosphorus, generally limits productivity in this system. Results of nutrient-enrichment experiments in a flow-through culture system indicated that inorganic nitrogen limited the growth rates of 8 out of 9 macroalgae species tested. In 6 of the species tested, specific growth rates of thalli cultured in unenriched seawater from the Kaneohe Bay water column were zero or negative after 12 d. These results suggest that, in order to persist in low-nutrient coral reef systems, some macroalgae require high rates of nutrient advection or access to benthic nutrient sources in addition to nutrients in the overlying water column. Nutrient concentrations in water samples collected from the microenvironments inhabited or created by macroalgae were compared to nutrient concentrations in the overlying water column. On protected reef flats, inorganic nitrogen concentrations within dense mats of Gracilaria salicornia and Kappaphycus alvarezii, and inorganic nitrogen and phosphate concentrations in sediment porewater near the rhizophytic algae Caulerpa racemosa and C. sertularioides were significantly higher than in the water column. The sediments associated with these mat-forming and rhizophytic species appear to function as localized nutrient sources, making sustained growth possible despite the oligotrophic water column. In wave-exposed habitats such as the Kaneohe Bay Barrier Reef flat, water motion is higher than at protected sites, sediment nutrient concentrations are low, and zones of high nutrient concentrations do not develop near or beneath macroalgae, including dense Sargassum echinocarpum canopies. Under these conditions, macroalgae evidently depend on rapid advection of low-nutrient water from the water column, rather than benthic nutrient sources, to sustain growth. Received: 1 December 1997 / Accepted: 9 July 1998     

Larvae of a colonial ascidian use a non-contact mode of substratum selection on a coral reef

The rate at which larvae successfully recruit into communities of marine benthic invertebrates is partially dependent upon how well larvae avoid benthic predators and settle on appropriate substrata. Therefore, to be able to predict recruitment success, information is needed on how larvae search for settlement sites, whether larvae preferentially settle on certain substrata, and the extent to which there are adequate cues for larvae to find these substrata. This article describes how larvae of the colonial ascidian Diplosoma similis find settlement sites on a coral reef. Direct field observations of larval settlement were made on a fringing reef in Kaneohe Bay, Oahu, Hawaii, between September 1985 and April 1986. A comparison of the substrata that larvae contacted prior to settlement relative to the percentage cover of these substrata on the study reef suggests that larvae are using a non-contact mode of substratum identification to locate suitable settlement sites. This mode of substratum identification allowed 74% of larvae to evade predation by benthic organisms who would otherwise have eaten larvae if they had been contacted. Of those larvae that evaded predation, 88% subsequently settled on the same two substrata upon which most adults are found (dead coral or the green alga Dictyosphaeria cavernosa). This pattern of settlement was probably a result of active selection, since the two substrata cover only 14.4% of the reef's surface and currents had little effect on the direction in which larvae swam. An important contributing factor to the high success rate of larval settlement on suitable substrata was the lack of any temporal decay in substratum preference. It is concluded that for Diplosoma similis larval supply is a sufficient predictor of larval settlement rate. However, for marine invertebrates whose larvae are passively dispersed and exhibit a greater temporal decay in substratum preference, larval settlement should generally have a greater dependency on spatial variation in the abundance of benthic predators and suitable substrata.     

Genetic variability and differentiation of sporophytes and gametophytes in populations of Gelidium arbuscula (Gelidiaceae: Rhodophyta) determined by isozyme electrophoresis

Genetic differentiation and genetic variability of sporophytic and gametophytic populations of Gelidium arbuscula (Bory) from three localities sampled in 1989 and 1990 in the Canary Islands (Spain) were examined by isozyme electrophoresis. Twenty-three to 29 putative alleles corresponding to 22 gene loci, were compared. High deviations in Hardy-Weinberg equilibrium, and significant differences between allelic frequencies of sporophytic and gametophytic subpopulations at the same locality were found, suggesting a predominant asexual reproduction of G. arbuscula. The genetic variability (percentage of polymorphic loci, mean number of alleles per locus and average gene diversity) of haploid subpopulations was lower than that of diploid subpopulations at all three localities, being the lowest described for seaweeds. No correlation between genetic and geographical distance was found. The high genetic differentiation coefficient between all subpopulations suggests a very reduced genetic flow between subpopulations of the same and of different localities. These results suggest that the genetic structure of the populations of G. arbuscula from the Canary Islands is due to a founder-effect combined with a predominance of asexual reproduction. This is the first report comparing allelic frequencies between sporophytic and gametophytic subpopulations of seaweeds.     

Egg production by the subtropical copepod Undinula vulgaris

Egg production by Undinula vulgaris, collected off Kaneohe Bay, Hawaii, was measured under field and laboratory conditions on 16 occasions from June to December 1991. In situ rates ranged from 0 to 15.7 eggs female^-1 d^-1, with a mean of 6.4 eggs female^-1 d^-1, 2.1% female body carbon d^-1. Maximum in situ production was 53 eggs female^-1 d^-1, 17.2% C d^-1. Average egg production (Y, eggs female^-1 d^-1) was related to the concentration of particulate carbon (X, g C l^-1) by the Ivlev function, Y=13.9[1-e^{-0.0097 (x-10)}], with R ²=0.96. Individuals with the same feeding history produced more eggs at lower temperatures in the laboratory. Egg production was not significantly correlated with dry weight, and no noticeable temporal trend was found. Despite the elevated habitat temperatures (26 to 27°C) of this subtropical copepod, maximum fecundity of U. vulgaris was comparable to, but average rates were lower than, egg production rates of similarly-sized, temperate and borcal species of the genus Calanus. Our results caution against broad extrapolations of the temperature-growth relationship for temperate coastal copepods to species from poorly studied, oligotrophic regions of the oceans.Contribution No. 3257 from the School of Ocean and Earth Science and Technology, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA     

Mate choice and fitness in a hybrid frog: Rana esculenta females prefer Rana lessonae males over their own

Summary The evolution and maintenance of female choice based on purely genetic differences is still a controversial issue, not only for theoretical reasons, but also because of the practical difficulty of demonstrating the fitness consequences of preferences and heritability of and genetic variability in the chosen traits. We argue that hybrid systems (broadly defined) offer suitable models for studying mate choice according to genetic differences. We present such a study for European water-frogs of the hybridogenetic Rana lessonae/Rana esculenta complex (L/E complex). R. esculenta, originally a hybrid between R. lessonae and R. ridibunda, eliminates the L genome premeiotically and only produces eggs and sperm containing only the R. ridibunda (R) genome. Consequently, the hybrid will only persist when it lives and mates with R. lessonae in mixed populations where it can regain the lost L genome. In such mixed populations, there is strong selection against E x E matings. because these will produce no viable offspring. We tested whether females of the hybrid R. esculenta do indeed avoid their own R. exculenta males and choose males of the parental species R. lessonae instead. Eleven E females were offered a simultaenous choice between one L and one E male. Females exhibited a significant preference for L males that was determined by the type of male, rather than by its size or activity. This choice is in the direction predicted from genetics. The question of why L males agree to mate with E females, but L females only rarely mate with E males, is answered by a sexual asymmetry in the cost/benefit ratios of mating with the wrong type and the right size. Our results are consistent with the mating pattern found in natural populations, but further studies are needed to show that female choice really causes this pattern.Correspondence to: H.-U. Reyer     

Annual variation in soft-body dry weight,reporductive cycle and sex ratios in populations of Patella vulgata at adjacent sites in the Orkney Islands

The relationships of shell length and internal volume with soft-body dry weight for three populations of Patella vulgata L. at Sandwick Bay in the Orkney Islands were studied between August, 1979 and March, 1982. Seasonal and annual fluctuations in the regression constants were explained by age-related variations both in overall growth rates and in the amount of effort directed toward gonad production. The reproductive cycle at all three sites was well synchronised, rapid development occurring between late June and November, with spawning following sometime between December and February; the whole population then remaining in the neuter/resting stage until July. The sex ratios within the population with respect to size (age) were examined; the majority of small, mature individuals were male, the number of females increased with size, although the largest individuals at each site were males. The sex ratio in the different populations varied from 2:1 to 6:1 in favour of males, but the “functional” ratio was much less in the latter due to the population structure.     

Chemical composition of midwater fishes as a function of depth of occurrence off the Hawaiian Islands: Food availability as a selective factor?

The variation with depth in water, lipid, protein, carbon and nitrogen contents (% wet weight) of 42 species of midwater fishes, collected in November 1976 off the west coast of Oahu in the Hawaiian Archipelago, was measured. The Hawaiian fishes show significant relationships between these components and depth of occurrence. The slopes of these relationships are not significantly different from those reported for midwater fishes from off California, USA. However, the fishes from Hawaii have significantly lower lipid levels and higher protein levels than do the species from off California. The deep-living Hawaiian species (500 m and deeper) have significantly lower lipid (% wet weight), but there is no significant difference in protein (% wet weight). The difference in lipid contents at all depths appears to be an evolved characteristic, with the greater lipid levels off California being selected for by greater spatial and temporal variation in the food supply for these fishes off the California coast than off Hawaii. The higher protein contents in the shallow-living Hawaiian fishes appear to reflect greater muscle power selected for in these fishes by the greater water clarity, and therefore greater reactive distances, in the surface layers off Hawaii. These conclusions support the general hypothesis that the lower protein contents of bathypelagic fishes are not directly selected by food limitation at depth, but rather result from the relaxation of selection for rapid-swimming abilities at greater depths due to the great reduction at greater depths in the distance over which visual predator-prey interactions can take place. The lower lipid levels in the deeper-living species are apparently made possible by the reduced metabolic rates of these species which reduces their need for energy stores.     

Skeletal Sr content and density in Porites spp. in relation to environmental factors

The coral genus Porites was investigated to evaluate the use of skeletal strontium content as a recorder of seasonal and annual temperature oscillations. In the Hawaiian archipelago, the mean annual water temperature fluctuates by ±0.5C°, with seasonal temperature ranges of 4 to 8C°; the resolution of the Sr thermometer appears to be ±1.5C°. Of this error term, ±0.7C° is analytical, the remainder is biological. Corals from some locations yield temperatures which are consistently offset from the Sr vs temperature calibration line, suggesting genetic population differences. Analysis of cores collected in 1980 from Hawaiian Porites spp. showed no discernible long-term trends over a 100 yr period. Although absolute temperatures are poorly resolved, subannual oscillations in skeletal Sr values accurately reflect recorded seasonal temperature variations. The most useful application of the Sr thermometer is in deciphering the skeletal density band pattern. Subannual oscillations in Sr-temperature values when correlated with density values showed a consistent pattern. When the sections chosen for x-radiography closely followed the growth axis, an abrupt shift from minimum to maximum skeletal density was evident in September/October each year, followed by a gradual decrease in density. The density pattern, shown by microdensitometry, is independent of latitude or temperature range over the Hawaiian archipelago. The annual density shift coincides with high but declining water temperature and solar insolation. If low-density growth represents optimum calcification conditions, the density shift in Hawaiian Porites spp. reflects a change in conditions from optimal to suboptimal. Analyses of samples from other Indo-Pacific locations confirm the generality of this density pattern and suggest a complex relationship between density and environmental light and temperature.Hawaii Institute of Geophysics Contribution No. 1209; Hawaii Institute of Marine Biology Contribution No. 618