Managing a protected marine area for the conservation of critically endangered vaquita (Phocoena sinus Norris, 1958) in the Upper Gulf of California

We analysed fisheries trends in the northern region of the Gulf of California, within the Biosphere Reserve of the Upper Gulf of California and Colorado Delta River and the Vaquita Refuge Area, and suggest measures to protect the vaquita, Phocoena sinus. We compiled and analysed catch reports of artisanal fishermen in the three fishing communities of the Upper Gulf of California (San Felipe in the State of Baja California, and Golfo de Santa Clara and Puerto Peñasco in the State of Sonora) from 1995 to 2007. This information was categorised with respect to geographic information systems, and all fishing sites within two marine protected areas in the region were identified. In addition, from a survey based on direct interviews with artisanal fishermen in each of the three ports, we identified that 23% of fishermen will continue fishing despite on-going fishing buy-out programmes in the region. We suggest several specific courses of action to decrease the fishing impact on this critically endangered cetacean. However, given the critical situation of this critically endangered species, it is very uncertain whether enforcing a no-take zone within the biosphere reserve and the Vaquita Refuge Area, or even a wider fishing moratorium, will be enough to save this endangered species from extinction.     

Total mercury content found in edible tissues of top predator fish from the Gulf of California,Mexico

Fish at the top of the food chain bioaccumulate and biomagnify toxic metals including mercury (Hg), at a higher rate than nonpredatory fish. However, although some top predator fish species are important in the human diet, the risks for consumers in Mexico are difficult to evaluate due to the scarce baseline information available. In the present article, data on the total mercury (THg) concentrations found in edible tissues of different species of sharks, rays, large pelagic fishes and groupers from the Gulf of California are presented and compared with national and international health guidelines. During 2003 and 2004, 73 shark dorsal tissue samples, 52 ray samples, 66 large pelagic fish samples and 16 grouper samples were collected at different sites along the Gulf of California. Samples were digested in a microwave system and analyzed by cold vapor atomic absorption spectrophotometry. Thirty samples (14%) showed concentrations of Hg above the national statutory limit of 1?mg?kg^?1, from which 25 samples were sharks and 3 were large pelagic fishes. A positive correlation was found between the natural log of THg [ln(THg)] and total length (TL cm) in species of sharks, rays and groupers. The Teacapán estuary in Sinaloa was detected as a possible source of Hg into the Gulf of California due to historic mining in the watershed. Mean Hg concentrations exceeded the regulatory limit of 1?mg?kg^?1 in the following highly commercial shark species: smooth hammerhead, pelagic thrasher, pacific sharpnose shark, dusky shark, scalloped hammerhead, and whitenose shark, in that order. It is recommended that preventive food advisories be issued with respect to these species until further investigations are conducted.     

A Behaviorally Explicit Demographic Model Integrating Habitat Selection and Population Dynamics in California Sea Lions

Abstract: Although there has been a call for the integration of behavioral ecology and conservation biology, there are few tools currently available to achieve this integration. Explicitly including information about behavioral strategies in population viability analyses may enhance the ability of conservation biologists to understand and estimate patterns of extinction risk. Nevertheless, most behavioral‐based PVA approaches require detailed individual‐based data that are rarely available for imperiled species. We present a mechanistic approach that incorporates spatial and demographic consequences of behavioral strategies into population models used for conservation. We developed a stage‐structured matrix model that includes the costs and benefits of movement associated with 2 habitat‐selection strategies (philopatry and direct assessment). Using a life table for California sea lions (Zalophus californianus), we explored the sensitivity of model predictions to the inclusion of these behavioral parameters. Including behavioral information dramatically changed predicted population sizes, model dynamics, and the expected distribution of individuals among sites. Estimated population sizes projected in 100 years diverged up to 1 order of magnitude among scenarios that assumed different movement behavior. Scenarios also exhibited different model dynamics that ranged from stable equilibria to cycles or extinction. These results suggest that inclusion of behavioral data in viability models may improve estimates of extinction risk for imperiled species. Our approach provides a simple method for incorporating spatial and demographic consequences of behavioral strategies into population models and may be easily extended to other species and behaviors to understand the mechanisms of population dynamics for imperiled populations.     

Viability Analysis of Reef Fish Populations Based on Limited Demographic Information

Abstract:  Marine protected areas (MPAs) that allow some degree of artisanal fishing have been proposed to control the overexploitation of marine resources while allowing extraction by local communities. Nevertheless, the management of MPAs is often impaired by the absence of data on the status of their resources. We devised a method to estimate population growth rates with the type of data that are usually available for reef fishes. We used 7 years of spatially explicit abundance data on the leopard grouper ( Mycteroperca rosacea ) in an MPA in the Gulf of California, Mexico, to construct a matrix population model that incorporated the effects of El Niño/La Niña Southern Oscillation on population dynamics. An environmental model that estimated different demographic estimates for El Niño and La Niña periods performed better than a single-environment model, and a single-habitat model performed better than a model that considered different depths as different habitats. Our results suggest that the population of the leopard grouper off the main island of the MPA is not viable under present conditions. Although the impact of fishing on leopard grouper populations in the MPA has not yet been established, fishing should be closed as a precautionary measure at this island if a priority of the MPA is to ensure the sustainability of its fish populations.     

Importance of jumbo squid Dosidicus gigas (Orbigny, 1835) in the pelagic ecosystem of the central Gulf of California

The Humboldt squid is an important predator in the pelagic ecosystem of the central Gulf of California and the commercial catch of this species has increased over the past decade, probable due to a decrease of several top predators (sharks, large pelagic fish and the marine mammals) and the optimal feeding conditions in this area. Its high abundance and important position in the pelagic food web was quantified through two trophic models of the pelagic ecosystem of the central Gulf of California. Models represented conditions in 1980 and 2002, to document the decadal changes in ecosystem structure and function. The models were composed of 18 functional groups, including marine mammals, birds, fish, mollusks, crustaceans, and primary producers. Model results show direct negative effects on principal prey groups such as myctophids and pelagic red crab and positive effects on sharks, marine mammals and specifically sperm whales. It thus appears that the jumbo squid has an important role in the ecosystem and plays a central part in the overall energy flow as main food item for most top predators, and due to its predation of organisms on lower tropic levels.     

Experimental degradation of oil in permeable sand from the Gulf of Aqaba,Red Sea

Degradation rates of light and heavy oil in permeable carbonate sands from the Gulf of Aqaba were investigated to evaluate the ability of sediments to degrade oil compounds. Silicate sands that are less permeable and different properties from carbonate sands were used for comparison. Estimates of oil degradation rates were based on oxygen consumption rates, calculated by incubating natural carbonate sands with oil. The degradation rates of light oil were twofold higher than those of heavy oil, which may be attributed to the presence of a higher carbon number in heavy oil compared with light oil. Degradation rates of light oil in carbonate sands were twofold higher than in silicate sands. Oil degradation rates calculated using the bottle incubation technique were three- to fourfold higher than rates from chamber incubations, indicating the importance of adequate mixing between oil particles and sediments during degradation processes. This study suggests that permeable sands, through their chemical and physical properties, increase oil biodegradation rates by enhancing flow through sediment particles and positively impacting bioturbation processes.     

Horizontal Distribution of Some Artificial Radionuclides in Sediments Collected Off the Rhone Mouth (Gulf of Lions-Mediterranean Sea)

Abstract

The Rhône delta is a typical microtidal estuary. River runoff spreads out into the Gulf of Lions as a surface plume influenced by the prevailing N or NW wind and the Liguro-Provençal-Catalan current. in the prodelta, sediments form a filter that traps radionuclides released by the different nuclear installations on the Rhône River and which are associated with fine particles. the horizontal distribution of various artificial radionuclides shows the highest concentrations at the Rhône River mouth. There,¹³⁷Cs reaches 86.6 and 94.4 Bq·kg^?1 dry wt. and is still present 10 miles away (32.5 Bq·kg^?1 dry wt.) in the southwestward direction (influence of the general circulation). Data obtained in the sediment at Roustan station between 1980 and 1990 show that in 1990, ¹³⁷Cs levels were similar to those found previous to the Chernobyl accident.     

Fractionation of trace metals (Mn,Zn, Cu,Pb) in Red Sea sediments,Gulf of Aden,Yemen

A sequential extraction technique was applied to estimate the chemical association of Mn, Zn, Cu and Pb in five chemical phases (exchangeable, carbonate, Fe–Mn oxides, organic matter and residual) in sediments of the Gulf of Aden, Yemen. The results indicated that a higher level of Mn was associated with the residual fraction (natural sources) than the non-residual fraction (anthropogenic sources). Zn fractionations revealed that it was associated more with Fe–Mn oxides and organic fractions than exchangeable and carbonate fractions. Most of the Cu was present in the residual form (60–72%) except for in the main port area (zone III), where it was associated with the organic phase (77% of the total Cu content, the organic matter content was 5%). Similarly, most Pb was bound in the residual fraction (56–71%) except the main port area where ～ 62% of the total Pb was bound in non-residual fractions. It was also found that the Pb concentration in the exchangeable fraction was very high compared with other metals. The risk assessment code for the metals showed a low risk for Zn and Cu, but low to medium risk for Mn. Fractionation of Pb showed medium risk at most of the regions except at the eastern area, which revealed a high risk for the aquatic environment.     

Potential environmental impact of dissolution of raw phosphate in sea water of the Gulf of Aqaba

Dissolution of raw phosphate (apatite) in sea water of the Gulf of Aqaba was investigated through lab incubation experiments. Three types from three different sources (Al-Hasa, Al-Abyad and Esh-Shydiya) have been used for these experiments. Impact of quantity, grain size, and source (type) of raw phosphate on dissolution rate were studied. Statistical analysis shows significant differences between the results obtained from comparing each two weights; as weight of apatite increased, dissolved inorganic phosphate-phosphorus (DIP) and fluoride in sea water solution increased. The differences between the dissolution rates of raw phosphate from the three sites were not significant while the differences between the different grain size fractions were significant. Dissolution rates were inversely related to particle size. Using a worst-case scenario, a conservative estimate of the maximum increase in DIP in seawater of the Gulf of Aqaba due to the apatite particles lost to the sea during ship loading resulted in DIP concentrations of 0.03 μM per year. As the residence time of the water in the Gulf of Aqaba is about one year, the DIP concentration will not increase by more than 0.03 μM under the estimated annual quantity of exported phosphate. Fluoride will not increase by more than 0.03 mg/l under the same conditions.     

Phosphate enrichment in the northern Gulf of Aqaba: Regulation by carbonate sediments and impact on nitrogen elevation

The effect of carbonate sediment in regulating phosphate concentrations in sea water was investigated by laboratory incubation experiments using different sediment types. Incubation experiments were made with two types of sediments: uncontaminated sediment from a marine reserve and contaminated sediment with deposited phosphate powders. Fluxes of inorganic nitrogen and phosphate were estimated from linear regressions of solute concentrations over incubation periods. Ammonium and phosphate fluxes were about twofold higher in the uncontaminated sediment that had significantly lower organic carbon and total phosphate concentrations than in the phosphate-contaminated sediment. To test the effect of dissolved phosphate on increasing nitrogen fixation, additional incubation experiments were carried out using treated carbonate and silicate sediments with added dissolved phosphate (20 μM). Incubations were made under sterile conditions with HgCl₂ added to distinguish between biologically enhanced processes and pure physicochemical processes. The adsorption rate of phosphate onto carbonate sediment was about twice that onto silicate sediments. No nitrogen elevation either as ammonium or as nitrate was observed in the soluble phosphate enrichment incubations. In conclusion, this study demonstrates the importance of the regulation of soluble phosphate concentrations in carbonate sediment environments where the carbonate sediment acts as a buffering system keeping soluble phosphate concentrations at certain steady-state levels. The study also demonstrates the lack of evidence on enhancement of nitrogen concentrations due to the increase phosphate concentrations.     

Vertical and spatial distribution of biogenic silica in the sediment of the gulf of Riga,Baltic Sea

The vertical and spatial concentration trends of biogenic silica (BSi) were investigated in a variety of sediment types from the Gulf of Riga. These trends were compared with the concentration of organic carbon to examine how variations in the mass sedimentation and the dissolution rate of BSi versus bacterially mediated oxidation of organic matter affect the distribution of BSi in different environments. The effects of important physical and biogeochemical factors on the distribution of BSi have also been examined.

The concentration of BSi in the surface sediment at accumulation bottoms ranges between 0.8–1.5 mmol/g with an average concentration of 1.1 mmol/g. This is about two times the concentration that has been reported in similar sediments in the open Baltic proper. Much lower concentrations were measured in erosion and transitional areas; on average around 0.2 and 0.6 mmol/g, respectively.

A comparison between recent sedimentation rate measurements (²¹⁰Pb) and concentrations of BSi within different accumulation bottoms suggests an approximate inverse relationship with each other. The importance of variation in the sedimentation rate on the surface BSi concentration is supported by the fact that higher C_org/BSi ratios are found in periphery accumulation zones close to transition areas (larger supply of carbon rich allochthonous material that dilutes settled amounts of BSi) than at accumulation bottoms in the central part of the Gulf. The C_org/BSi ratio in the sediment is always lower than in living siliceous algae which shows that the microbial degradation of organic carbon is always greater than the inorganic dissolution of BSi, irrespective of the assemblage of silica and non‐silica species.

The general vertical concentration pattern at accumulation sites showed a decreased concentration with increased depth down to 2–6 cm below seafloor where the concentration gradually equalizes. The concentration in the equalizing zone is on average about 20% lower than in the uppermost centimeter. This implies that the main part of the BSi entering the accumulation bottoms is permanently buried and that a great amount of silica already has been released during halmyrolysis. The spatial and vertical BSi trends at sites in transitional and erosional areas reflects prevailing sedimentation conditions with a low concentration in sections with a dominance of sand and gravel (no deposition of fine material) and a higher concentration in the sections containing stiff glacial clay (former accumulation area).

The average annual burial amount of BSi in the Gulf has been estimated to be around 50 000 tons of which most is buried in accumulation bottoms outside the central muddy part of the Gulf. The buried amount is about 60% of the annual river load of silica.     

Quantitative tools for implementing the new definition of significant portion of the range in the U.S. Endangered Species Act

In 2014, the Fish and Wildlife Service (FWS) and National Marine Fisheries Service announced a new policy interpretation for the U.S. Endangered Species Act (ESA). According to the act, a species must be listed as threatened or endangered if it is determined to be threatened or endangered in a significant portion of its range (SPR). The 2014 policy seeks to provide consistency by establishing that a portion of the range should be considered significant if the associated individuals’ “removal would cause the entire species to become endangered or threatened.” We reviewed 20 quantitative techniques used to assess whether a portion of a species’ range is significant according to the new guidance. Our assessments are based on the 3R criteria—redundancy (i.e., buffering from catastrophe), resiliency (i.e., ability to withstand stochasticity), and representation (i.e., ability to evolve)—that the FWS uses to determine if a species merits listing. We identified data needs for each quantitative technique and considered which methods could be implemented given the data limitations typical of rare species. We also identified proxies for the 3Rs that may be used with limited data. To assess potential data availability, we evaluated 7 example species by accessing data in their species status assessments, which document all the information used during a listing decision. In all species, an SPR could be evaluated with at least one metric for each of the 3Rs robustly or with substantial assumptions. Resiliency assessments appeared most constrained by limited data, and many species lacked information on connectivity between subpopulations, genetic variation, and spatial variability in vital rates. These data gaps will likely make SPR assessments for species with complex life histories or that cross national boundaries difficult. Although we reviewed techniques for the ESA, other countries require identification of significant areas and could benefit from this research.     

Ecological metrics of biomass removed by three methods of purse-seine fishing for tunas in the eastern tropical Pacific Ocean

An ecosystem approach to fisheries management is a widely recognized goal, but describing and measuring the effects of a fishery on an ecosystem is difficult. Ecological information on the entire catch (all animals removed, whether retained or discarded) of both species targeted by the fishery and nontarget species (i.e., bycatch) is required. We used data from the well-documented purse-seine fishery for tunas (Thunnus albacares, T. obesus, and Katsuwonus pelamis) in the eastern tropical Pacific Ocean to examine the fishery's ecological effects. Purse-seine fishing in the eastern tropical Pacific is conducted in 3 ways that differ in the amount and composition of target species and bycatch. The choice of method depends on whether the tunas are swimming alone (unassociated sets), associated with dolphins (dolphin sets), or associated with floating objects (floating-object sets). Among the fishing methods, we compared catch on the basis of weight, number of individuals, trophic level, replacement time, and diversity. Floating-object sets removed 2-3 times as much biomass as the other 2 methods, depending on how removal was measured. Results of previous studies suggest the ecological effects of floating-object sets are thousands of times greater than the effects of other methods, but these results were derived from only numbers of discarded animals. Management of the fishery has been driven to a substantial extent by a focus on reducing bycatch, although discards are currently 4.8% of total catch by weight, compared with global averages of 7.5% for tuna longline fishing and 30.0% for midwater trawling. An ecosystem approach to fisheries management requires that ecological effects of fishing on all animals removed by a fishery, not just bycatch or discarded catch, be measured with a variety of metrics.     

Breeding Periodicity for Male Sea Turtles,Operational Sex Ratios,and Implications in the Face of Climate Change

Abstract: Species that have temperature‐dependent sex determination (TSD) often produce highly skewed offspring sex ratios contrary to long‐standing theoretical predictions. This ecological enigma has provoked concern that climate change may induce the production of single‐sex generations and hence lead to population extirpation. All species of sea turtles exhibit TSD, many are already endangered, and most already produce sex ratios skewed to the sex produced at warmer temperatures (females). We tracked male loggerhead turtles (Caretta caretta) from Zakynthos, Greece, throughout the entire interval between successive breeding seasons and identified individuals on their breeding grounds, using photoidentification, to determine breeding periodicity and operational sex ratios. Males returned to breed at least twice as frequently as females. We estimated that the hatchling sex ratio of 70:30 female to male for this rookery will translate into an overall operational sex ratio (OSR) (i.e., ratio of total number of males vs females breeding each year) of close to 50:50 female to male. We followed three male turtles for between 10 and 12 months during which time they all traveled back to the breeding grounds. Flipper tagging revealed the proportion of females returning to nest after intervals of 1, 2, 3, and 4 years were 0.21, 0.38, 0.29, and 0.12, respectively (mean interval 2.3 years). A further nine male turtles were tracked for short periods to determine their departure date from the breeding grounds. These departure dates were combined with a photoidentification data set of 165 individuals identified on in‐water transect surveys at the start of the breeding season to develop a statistical model of the population dynamics. This model produced a maximum likelihood estimate that males visit the breeding site 2.6 times more often than females (95%CI 2.1, 3.1), which was consistent with the data from satellite tracking and flipper tagging. Increased frequency of male breeding will help ameliorate female‐biased hatchling sex ratios. Combined with the ability of males to fertilize the eggs of many females and for females to store sperm to fertilize many clutches, our results imply that effects of climate change on the viability of sea turtle populations are likely to be less acute than previously suspected.     

Physiological testing of Mytilus galloprovincialis for the environmental assessing of coastal marine areas: a case study in Boka Kotorska Bay (the Adriatic Sea)

The aim of this work was to validate in the field certain measurement of the heart rate alterations of the bioindicator organism Mytilus galloprovicialis as a tool for ecotoxicological biomonitoring and assessment applications related to coastal and marine environment. The latter was determined by testing the mussels according to the method of functional loading (1-hour lowered salinity stress-exposure). The time of heart rate (HR) recovery (T_rec) and the coefficient of HR variation (CV_HR) in a group of tested animals were used as biomarkers for the assessment of their physiological state. It was found that the values of the biomarkers in mussels from our reference location were 1.3-1.5 times lower than in mussels from differently polluted coastal areas of the Bay. The study also included an investigation of the relationship between the mussel’s cardiac rhythm characteristics and the bioaccumulation of trace elements in their soft tissues, caused by chronic pollution. The conclusion was drawn that this approach to the physiological testing of mussels could be useful in developing a rapid and low-cost method for the assessment of the health of coastal ecosystems.     

Long‐Range Movement of Humpback Whales and Their Overlap with Anthropogenic Activity in the South Atlantic Ocean

Humpback whales (Megaptera novaeangliae) are managed by the International Whaling Commission as 7 primary populations that breed in the tropics and migrate to 6 feeding areas around the Antarctic. There is little information on individual movements within breeding areas or migratory connections to feeding grounds. We sought to better understand humpback whale habitat use and movements at breeding areas off West Africa, and during the annual migration to Antarctic feeding areas. We also assessed potential overlap between whale habitat and anthropogenic activities. We used Argos satellite‐monitored radio tags to collect data on 13 animals off Gabon, a primary humpback whale breeding area. We quantified habitat use for 3 cohorts of whales and used a state‐space model to determine transitions in the movement behavior of individuals. We developed a spatial metric of overlap between whale habitat and models of cumulative human activities, including oil platforms, toxicants, and shipping. We detected strong heterogeneity in movement behavior over time that is consistent with previous genetic evidence of multiple populations in the region. Breeding areas for humpback whales in the eastern Atlantic were extensive and extended north of Gabon late in the breeding season. We also observed, for the first time, direct migration between West Africa and sub‐Antarctic feeding areas. Potential overlap of whale habitat with human activities was the highest in exclusive economic zones close to shore, particularly in areas used by both individual whales and the hydrocarbon industry. Whales potentially overlapped with different activities during each stage of their migration, which makes it difficult to implement mitigation measures over their entire range. Our results and existing population‐level data may inform delimitation of populations and actions to mitigate potential threats to whales as part of local, regional, and international management of highly migratory marine species. Cuantificación de los Movimientos de Gran Amplitud y el Traslape Potencial con Actividad Antropogénica y las Ballenas Jorobadas en el Océano Atlántico Sur