Microbial activities in a permanently stratified estuary. II. Microbial activities at the oxic-anoxic interface

Bacterial populations and activities at the oxic-anoxic interface of Saelenvann, a permanently stratified estuary in western Norway, have been studied. Concentrations of particulate material and direct counts of bacteria were higher at the interface than in the surrounding water. Dark assimilation of CO₂ was maximal at the interface, indicating high rates of chemoautotrophic productivity. Nitrification could possibly account for 10 to 50% of the measured dark CO₂ fixation. Nitrate is rapidly consumed by dentrifying organisms in the anoxic water and by photosynthetic organisms in the oxic water. A characteristic population of photosynthetic bacteria similar to Chlorobium phaeovibrioides flourishes at the interface, imparting a reddishbrown discoloration to the water.     

Dedication

Elevated concentrations of arsenic (As) occurred during warm months in water from the outlet of Lake Mohawk in northwestern New Jersey. The shallow manmade lake is surrounded by residential development and used for recreation. Eutrophic conditions are addressed by alum and copper sulfate applications and aerators operating in the summer. In September 2005, arsenite was dominant in hypoxic to anoxic bottom water. Filterable As concentrations were about 1.6–2 times higher than those in the upper water column (23–25 μg/L, mostly arsenate). Hypoxic/anoxic and near-neutral bottom conditions formed during the summer, but became more oxic and alkaline as winter approached. Acid-leachable As concentrations in lake-bed sediments ranged up to 694 mg/kg in highly organic material from the tops of sediment cores but were <15 mg/kg in geologic substrate. During warm months, reduced As from the sediment diffuses into the water column and is oxidized; mixing by aerators, wind, and boat traffic spreads arsenate and metals, some in particulate form, throughout the water column. Similar levels of As in sediments of lakes treated with arsenic pesticides indicate that most of the As in Lake Mohawk probably derives from past use of arsenical pesticides, although records of applications are lacking. The annual loss of As at the lake outlet is only about 0.01% of the As calculated to be in the sediments, indicating that elevated levels of As in the lake will persist for decades.     

Worm burrows and oxic microniches in marine sediments. 1. Spatial and temporal scales

The upper 2 to 10 cm of shallow-water sediments may represent a mosaic of oxic and anoxic microhabitats. In the studied sediments the volume fraction of patches of oxic sediments decreased with depth from around 0.2 in the upper centimetres to zero at 5 to 10 cm depth. The mean volume fraction of oxic microhabitats beneath a unit surface and down to 5–8 cm depth ranged between 0.06 and 0.16. The mean distance between such neighbouring oxic microniches was several millimetres in the upper centimetres of the sediment. The oxic microniches are caused by sinall (diameter: 0.5 to 2 mm), inhabited worm burrows which have not previously drawn attention in bioturbation studies. An implication is that anaerobic and aerobic microbial processes take place at identical depths. In such sediments the apparent vertical zonation of microbial processes and of microbial biota over a scale of several centimetres reflects the diminishing fraction of oxic habitats with depth rather than an idealised vertical redox sequence (such as found over a few millimetres in microbial mats which develop in the absence of bioturbation).     

Benthic community respiration in the N.W. Atlantic Ocean: in situ measurements from 40 to 5200 m

Benthic community respiration was measured in situ at 9 stations along the Gay Head-Bermuda transect from depths of 40 to 5200 m. Three methods were used; bell jar respirometers, grab respirometers, and free vehicle respirometers. Benthic community respiration rates spanned three orders of magnitude, decreasing from 21.5 ml O₂ m^-2 h^-1 at 40 m in November to 0.02 ml O₂ m^-2 h^-1 at 5200 m. Rates decreased two orders of magnitude between 40 and 1800 m and then significantly declined again between the continental rise (3650 m) and the abyssal plain stations. Predictive equations for benthic community respiration along the transect reflect a strong correlation with depth of water. Of lesser significance are the correlations with water temperature, dissolved oxygen, benthic animal biomass, surface primary productivity and sediment organic matter. Calculations show that annual benthic respiration can utilize 1 to 2% of the surface primary productivity. Of the 2 to 7% organic carbon fixed at the surface which supposedly reaches the bottom, only 15 to 29% is utilized by the benthic community at 2200, 3000, and 3650 m. The energy requirements of other biological components of deep-sea benthic communities, such as benthopelagic and macro-epibenthic animals, not included in these measurements, must also be considered in calculating a balance of carbon.Contribution from Scripps Institution of Oceanography.     

Photosynthetic production and its regulating factors in the Baltic Sea

Measurements of primary production in the Baltic Sea over a period of 2 years (1969/1971) by the ¹⁴C method are reported. The rate of total annual production for the Baltic Sea proper and the Gulf of Finland including coastal areas appears to lie between 35 and 40 gC·m², a rate which can be assumed as characteristic for oligotrophic waters with a low production rate. An apparent increase in productivity between the 2 years could be noted. Calculations for the water mass below the halocline show that between 0.7 and 0.8 ml/l oxygen is used up during a period of 3 months required for the development of anoxic conditions. The major portion of the organic matter in the Baltic Sea undergoes decomposition in the sub-photic zone above the halocline. The ratio of organic material in deep water to the total available oxidizable matter appears to remain constant with time; therefore, the apparent increase in productivity in the photic layer does not affect apprecibly the development of anoxic conditions in deep water. Of the different areas investigated, the Gulf of Finland seems to be the most productive. In the southern Baltic Sea, the rate of production over 5 years between 1966 and 1971 has not changed appreciably. In fact, it shows a trend toward a slight decrease, whereas, in other areas of the Baltic Sea, the rate of production indicates an apparent increase. Comparison with oceanic coastal areas of the west coast of Sweden shows that the rate of production there is higher than in the Baltic Sea. Of the micronutrients controlling productivity in the photic layer of the Baltic Sea, nitrate has a stronger limiting effect on plant growth than phosphate, a fact which is in agreement with existing conceptions on the subject. Dissolved iron does not seem to exert any appreciable influence on the productivity.     

Life history of the nematode Theristus anoxybioticus from sublittoral muddy sediment at methane seepages in the northern Kattegat,Denmark

Field and laboratory studies from 1989 to 1994 of the nematode Theristus (Penzancia) anoxybioticus Jensen, 1995 inhabiting muddy sediment at methane seepages in the northern Kattegat, Denmark, have revealed a series of biological features of adults and juveniles not observed before in free-living marine nematodes. Reproductive adults were present in April and May only and inhabited the uppermost cm of sediment, while juveniles inhabited deep anoxic and sulphidic sediment layers during the remaining months of the year. This points to a downwards migration of newly hatched juveniles and an upwards migration during adulthood. Gut content analyses showed that adults feed mainly on benthic diatoms by swallowing whole cells while juveniles probably feed on bacteria; this differentiation in food clearly relates to the main bulk of potential food items in their respective microhabitats. The generation time is estimated to be one year, with a juvenile life span of about nine months, which is four to eight times longer than that found in related aerobic species of similar body size. Adults survived in oxic water but 50% died within 15 h in hypoxic water (5 to 6% atm sat), and all died within 12 h in anoxic water. Juveniles on the other hand died within 0.5 h in oxic water but survived anoxic water for at least 15 d. These results suggest that juveniles of T. anoxybioticus are adapted to an anaerobic life style.     

Sources,distribution, and decomposition stages of sedimentary organic matter in estuaries and its adjacent areas

Lignin-derived phenols, C/N ratios and ratios of refractory to total organic matter were used to study the sources, distribution, and diagenesis of sedimentary organic matter along estuary, river bank, and salt marsh systems. The Changjiang Estuary showed a higher signal of terrestrial organic matter at the river mouth which decreased farther offshore. The locations along the Qiantang River were affected by their adjacent surroundings, and the Andong salt marsh showed higher terrestrial organic matter signal at the upper marsh compared to the lower marsh. All studied areas showed slight increases in organic matter decomposition farther downstream and towards the sea. Study of these three different systems will improve our understanding on their ecotoxicological impact. The Changjiang Estuary had higher pollutant levels near the river mouth, which decreased farther offshore due to dilution. The midstream Qiantang River was most likely affected by pollution from their adjacent surroundings. Pollutants were likely to be accumulated in the Andong salt marsh due to the presence of marsh plants and small-sized particles. Organic pollutants were likely to be decomposed during transport along the systems. The ability of the sediments to release inorganic pollutants was determined by whether these systems were oxic or anoxic.     

Stromatolitoid microbial nodules from Bermuda —a special micro habitat for meiofauna

In Bermuda, stromatolitoid microbial nodules are found in dense groups in seagrass beds and on subtidal sandy or rocky bottoms. They develop between January and the beginning of August and may reach 15 cm in diameter and 6 cm in height. Nodules grow on top of the sediment surface and consist of convex interwoven mats of the cyanobacterium Phormidium corium and fine sediment particles trapped in these mats. Nodules were studied in the field and laboratory (in 1989–1992) with respect to their structure, microbial community, sediment chemistry and associated meiofauna. Vertical profiles taken with microelectrodes showed steep gradients of oxygen and sulfide. While free oxygen was only detected in the upper 2 mm, the sulfide concentrations increased with depth and reached maximal 1250 moll^-1 inside the nodules. On the basis of microscopic observations and sediment chemistry, vertical sections through a nodule reveal four distinct layers: (A) an oxic green surface layer of growing cyanobacteria mats, (B) an anoxic yellow-white laminated layer of sediment particles, mucus and unpigmented cyanobacteria sheaths, (C) an anoxic sulfidic (sulfide <50 moll^-1) interface where colour changes from yellow to gray and (D) an anoxic sulfidic (sulfide can increase to 1250 moll^-1) gray core composed of sediment and decomposing cyanobacteria. The following meiofauna taxa were found in the nodules: Ciliata, Turbellaria, Gnathostomulida, Gastrotricha, Nematoda, Kinorhyncha, Polychaeta, Ostracoda and Harpacticoida. The distribution of the meiofauna was significantly different (p<0.05) within the four layers. The highest density of individuals was found in the sulfidic interface and core. Nematodes represented the dominant group in general. Thiobiotic organisms, such as the Gnathostomulida, Solenofilomorphidae, and Stilbonematinae were primarily found in the anoxic sulfidic layers of the nodules.     

利用下水管网系统净化城市污水的模拟试验

用固定化细胞技术进行了下水管网系统污水净化的模拟试验,比较研究了厌氧、好氧、厌氧缺氧好氧、缺氧好氧４ 种工艺净化污水的效果．结果表明,在管网系统中设置固定化细胞,采用缺氧好氧工艺流程,可使污水中的污染物去除６０％ 以上,出水水质可达国家污水综合排放二级标准．     

The sulfur cycle of a marine sediment model system

In a laboratory sediment model consisting of sand and chopped Zostera marina leaves, the sulfur cycle and the succession and zonation patterns of sulfur bacteria were studied for a period of 7 months. The pool size of different forms of sulfur was quantified, and the rate of sulfate reduction was measured with an in situ radio-tracer technique at regular intervals. From these data, transfer rates of the sulfur cycle in the system could be calculated for different periods. The rate of sulfate reduction was initially 80 nMS·cm³·day^-1; this decreased to 25 nMS·cm³·day^-1 towards the end of the experiment as the system started to become oxidized. There was a transient accumulation of elemental sulfur in the bacterial plate at the sediment surface. More than 50% of the total mineralization of the organic material was due to sulfate reduction. Comparison with the net oxygen uptake showed that, during the first 2 to 3 months (when the sediment closely resembled a natural, reduced shallow water sediment), SO₄ ^- was equally as important as O₂ for transporting oxidacion equivalents from the water to the sediment.     

Microbial reaction rates and bacterial communities in sediment surrounding burrows of two nereidid polychaetes (Nereis diversicolor and N. virens)

The effects of infaunal mode of life on sediment properties, microbial reaction rates, as well as abundance and composition of bacterial communities were studied in sediment surrounding burrows (mucus lining, oxidised wall, ambient anoxic and surface sediment) of two closely related, but behaviourally different, nereidid polychaete worms: the facultative suspension-feeder Nereis (Hediste) diversicolor and the obligate deposit-feeder Nereis (Neanthes) virens. Burrow sediment of the two species was collected from two adjacent (50 m distance) shallow sandy locations (Kertinge Nor, Denmark). The burrow lining and wall of both polychaete species were enriched in organic matter originating from mucous secretions by the inhabitants and phytoplankton trapped through irrigation. This was more evident for N. diversicolor that shows a significantly higher irrigation rate than N. virens. Both the organic matter mineralisation rates (based on anaerobic incubations) and bacterial abundance were higher along the burrow linings and walls. However, accumulation of porewater TCO₂ and dissolved organic carbon in sediments adjacent to burrows increased most rapidly in the presence of N. diversicolor, suggesting higher heterotrophic activity associated with this species. Surprisingly, bacterial abundance was lower around burrows of N. diversicolor than those from N. virens indicating that burrow environments from the first species harbour a more active bacterial community. Molecular fingerprints of the 16S rRNA gene from bacterial communities showed that the composition of the burrow linings and walls resembled the ambient anoxic sediment rather than the oxic sediment surface. On the other hand, the bacterial fingerprints of the sediment surrounding the burrows of the two polychaete species were markedly different suggesting either a site-specific difference in sediment parameters or a significant species-specific impact of the burrow inhabitants.     

Sedimentation and sulfate reduction under a mussel culture

The sedimentation and dissimilatory sulfate reduction under a blue-mussel culture were quantified in order to gain information on the environmental impact of intense mussel farming. The sedimentation rate (3 g C·m^-2·d^-1) under a culture is nearly three times higher than at a nearby reference station. A build-up of sediment rich in organic material and sulfide takes place under the mussels. At 15°C the sulfate reduction rate was 30.5 mmol SO ₌ ⁴ ·m^-2·^-1 in the upper 10 cm of the mussel sediment. The increase in sedimentation under a mussel culture and the consequent effects should be considered when establishing mussel farms.     

Fluxes and Transport of Organic Carbon and Trace Metals in the Tropical Tsengwen Estuary,Southwestern Taiwan

Distributions of organic carbon and trace metals were investigated in the tropical Tsengwen river end-member and in the estuary to better understand thoroughly the riverine fluxes and estuarine transports of constituents into the sea. Experimental results indicated that riverine fluxes of organic carbon and trace metals possessed a highly temporal variability, attributed primarily to temporal variation in river water discharge and suspended load. More than 70% of annual fluxes of dissolved constituents and >90% of particulate constituents arose from river floods caused by summer typhoons. the flushing time of fresh water in the estuary varied from a half month in the dry season to a half day in the flood period. Dissolved organic carbon (DOC) and nutrienttype metals (Cd, Cu, Zn) were conservatively transported through the estuary. Dissolved particle-reactive metals (Mn, Pb), however, were apparently transported non-conservatively through the estuary. Particulate organic carbon (POC) and trace metals (PTM) were transported non-conservatively by following the transport mode of total suspended matter (TSM) in the estuary. DOC slightly dominates the transport of organic carbon while particle-reactive PTM predominates the transport of trace metals through the estuary. Total organic carbon (TOC) in estuarine sediment was progressively enriched with ¹³C downstream, as derived by mixing the overlying TSM between terrestrial and marine end-members. Distributions of trace metals in sediment were subsequently controlled by sedimentary TOC and particle size. Based on results presented here, we believe that enrichments of trace metals in the estuary are attributed primarily to the natural processes of transport and sedimentation of fluvial TSM     

Bacterial sulfate reduction within reduced microniches of oxidized marine sediments

Bacterial sulfate reduction was demonstrated in the oxidized surface layers of a coastal marine sediment using a radiotracer technique. The obligate anaerobic process takes place within reduced sediment pellets of 50 to 200 m diameter. The H₂S produced diffuses out into the interstitial solution and is oxidized before any detectable accumulation takes place. This microniche structure explains the presence of sulfate-reducing (Desulfovibrio spp.) and sulfide oxidizing (Beggiatoa spp.) bacteria and of ferrous sulfide and pyrite in the oxidized sediment. Sulfate reduction was also demonstrated within detrital particles experimentally decomposed in oxic seawater or sediment. The limiting conditions for the maintenance of a reduced microniche within an oxic environment is discussed in terms of a theoretical model.     

Interrelationships between sulfate reducing and methane producing bacteria in coastal sediments with intense sulfide production

Coastal sediments receiving different amounts of organic carbon through sedimentation were investigated with respect to sulfate reduction and methanogenic activity. Sampling was carried out at sediment temperatures of 7° and 15°C. Sulfate-reducing and methanogenic bacteria were found at all depths. Sulfate reduction decreased with depth and the highest sulfide concentrations were found a few centimeters below the sediment surface, up to 15 mM at 15°C and pH 7.1. In the same segments a maximum in the methane concentration was also found, 0.91 mM. The high sulfide concentration inhibited the methane formation from acetate but not from carbon dioxide. In the organic rich sediment sulfate reduction was limited by the diffusion of SO ₄ ⁺ into the sediment and methane production from acetate by sulfide diffusion out of the sediment. When electron acceptor concentration limits sulfate reduction, thermodynamic calculations show that the utilization of electron donors more reduced than acetate is favored. In the sediment with the high carbon-input, acetate predominated at 15°C whereas in the low carbon-input sediment hardly any short chain organic acids were detected. The possibility of a shift in sulfate reduction from acetate oxidation to acetate production is discussed.     

Model of turbulence penetration into a suspension layer on a sediment bed and effect on vertical solute transfer

The vertical diffusional mass (solute) transfer through a suspended sediment layer, e.g. at the bottom of a lake, reservoir or estuary, by the propagation of velocity fluctuations from above was investigated. The attenuation of the velocity fluctuations in the suspension layer and the associated effect on solute transfer through the suspension layer was simulated. To represent large eddies traveling downstream in water over a high-concentration suspended sediment layer, a streamwise velocity fluctuation moving in downstream direction was imposed along the upper boundary of the suspension layer. Velocity fluctuations and downstream velocity were normalized by the shearvelocity (U_*) at the top of the suspension layer. Streamwise and vertical velocity components inside the suspension layer, were obtained from the 2-D continuity and the Navier–Stokes equations. The persistence of turbulence with depth—as it penetrates from the overlying water into the suspension layer—was found to depend on its amplitude, its period, and on the apparent viscosity of the suspension. The turbulence was found to propagate efficiently into the suspension layer when its frequency is low, and the apparent viscosity of the suspension is high. Effects on vertical mass transfer were parameterized by penetration depth and effective diffusion coefficient, and related to apparent viscosity of the suspension, Schmidt number and shear velocity on top of the suspension layer. The enhancement of turbulence penetration by viscosity is similar to the flow near an oscillating flat plate (Stokes’ second problem), but is opposite to turbulence penetration into a stationary porous and permeable sediment bed. The information is applicable to water quality modeling mear the sediment/water interface of lakes, river impoundments and estuaries.     

Impact of the polychaete Capitella sp. I on microbial activity in an organic-rich marine sediment contaminated with the polycyclic aromatic hydrocarbon fluoranthene

Polychaetes belonging to the genus Capitella are often present in high numbers in organic-rich sediments polluted with, e.g., oil components, and Capitella spp. may have a great impact on the biogeochemistry of these sediments. We examined the influence of Capitella sp. I on microbial activity in an organic-rich marine sediment contaminated with the polycyclic aromatic hydrocarbon, fluoranthene. Capitella sp. I were added to microcosms (10 000 ind m⁻²) and the impact of a pulse-sedimentation of fluoranthene-contaminated sediment (3 mm layer) was studied for a period of 12 d after sedimentation. The sediment oxygen uptake and total sediment metabolism (TCO₂ production) increased in cores with worms (71 to 131%), whereas the anaerobic activity, measured as sulfate reduction rate 12 d after sedimentation, was lower compared to cores without worms. The effect of fluoranthene on sulfate reduction was most pronounced in the presence of worms, with a 34% reduction versus 16% in cores without worms. The reduced sulfur pools in cores with worms were smaller than in cores without worms, suggesting that the reduced anaerobic activity was caused by increased oxidation of the sediment, which may favor O₂ and other electron-acceptors (e.g. NO₃ ⁻, Fe³⁺, Mn⁴⁺) in organic matter decomposition. The sediment oxygen uptake and TCO₂ production did not show significant changes due to fluoranthene treatment, indicating that these parameters were either less sensitive to fluoranthene stress or recovered more rapidly (i.e. within 48 h) than sulfate reduction rates. Bioturbation by Capitella sp. I altered the depth profile of fluoranthene such that fluoranthene was found in deeper sediment layers (down to 2 cm) where diffusional loss and microbial breakdown probably are reduced relative to surface layers. In cores without worms, fluoranthene was found down to 1 cm, with 75% remaining in the upper 5 mm. Received: 5 December 1996 / Accepted: 11 February 1997     

Oxygen/sulfide regime and nematode fauna associated with Arenicola marina burrows: new insights in the thiobios case

Profiles of oxygen and sulfide around the burrows of the lugworm, Arenicola marina, from a North Sea tidal flat were examined with microelectrodes, and the steep gradients were related to the microdistribution of nematodes. Around the tail shaft free oxygen penetrated only 2 mm into the burrow wall, coinciding with a bright zone sharply limited by the ambient black sediment. Contrastingly, in normal bottoms of the tidal flat (controls) only the surface of the bright zone was supplied with free oxygen. Here, the dark colouration coincided with the presence of free hydrogen sulfide. Around the tail shaft the nearest free hydrogen sulfide was detected 6 mm from the burrow wall leaving several millimetres of black sediment without measurable free sulfide. We discuss how these divergencies may relate to the stability of the oxygen/sulfide gradients and the course of time involved in their formation. A total of 54 nematode species were identified. Based on non-metric Multidimensional Scaling Ordination, four nematode assemblages corresponded to four microhabitats of the A. marina burrow: the funnel, the feeding pocket, the tail shaft and the feacal cast. The tail shaft assemblage (oxic plus partly anoxic zones) was similar to that of the anoxic zone of the control sediment. It was dominated by the most abundant nematode in the present study, Metalinhomoeus biformis (mean abundance in tail shaft 202 indx10 cm^-3). Adults of common nematode species from sulfidic microhabitats had a significantly higher length/diameter ratio than those inhabiting the oxic zone of the control sediment (p<0.001). The chemical recordings and metric analysis indicate that these slender nematodes around the A. marina tail shaft and in the reduced horizons of the reference sites represent thiobiotic assemblages, as compared to the shorter and stouter oxybiotic species characterising the assemblages from the surface zone and (partly) the funnel.     

Chromium in intertidal sediments of the Clyde,UK: potential for remobilisation and bioaccumulation

Detailed surveys of intertidal sediments have been performed along the north and south shores of the Inner Clyde estuary, UK. Surface sediment data reveal significant spatial variation in Cr content and an association with major sediment characteristics and location within the estuary. Depth variation for Cr and other heavy metals cannot be explained by variation in major geochemical controls such as grain size and organic matter and highlights the impact of historical contamination on sediment quality. These elevated levels at depth may still have environmental impact through redox-reactivity, in association with iron and manganese. Sequential extraction of sediments and pore water analysis of Cr(VI) and Cr(III) provide detailed information on release potential from the sediments. The implication of Cr mobility for biota in the estuary has been assessed by the analysis of a common marine bivalve, Mytilus edulis (Blue Mussel) and a burrowing polychaete, Nereis diversicolor (rag worm) from a number of survey sites. Bioconcentration factors for Mytilus indicate that the weakly held portion of sediment Cr is available for uptake and in the case of Nereis, bioaccumulation appears to be inhibited by sediment organic matter.     

Seafloor ecosystem functioning: the importance of organic matter priming

Organic matter (OM) remineralization may be considered a key function of the benthic compartment of marine ecosystems and in this study we investigated if the input of labile organic carbon alters mineralization of indigenous sediment OM (OM priming). Using ¹³C-enriched diatoms as labile tracer carbon, we examined shallow-water sediments (surface and subsurface layers) containing organic carbon of different reactivity under oxic versus anoxic conditions. The background OM decomposition rates of the sediment used ranged from 0.08 to 0.44 μmol C ml_ws⁻¹ day⁻¹. Algal OM additions induced enhanced levels of background remineralization (priming) up to 31% and these measured excess fluxes were similar to mineralization of the added highly degradable tracer algal carbon. This suggests that OM priming may be important in marine sediments.