Physical and Sanitary Quality of Hand-Dug Well Water from Oil-Producing Area of Nigeria

The physical (pH, Dissolved Solids, Dissolved Oxygen, conductivity, water depth temperature) and bacteriological (Total coliforms, Faecal coliforms) characteristics of 22 hand-dug wells in oil-rich Niger Delta of Nigeria were investigated. All coliforms counts (Log₁₀ MPN/100 ml) varied from well to well ranging from 0 to 6.0 although faecal coliform counts were markedly lower (0–3.5 vs 1.0–6.0). When both seasons were compared, faecal coliform counts were significantly higher (t test; P < 0.05) during the wet season whereas no significant difference was observed in respect of total coliforms. Unlike the total coliforms, faecal coliform counts increased in wells close to septic tanks during the wet season. Although a declining trend was observed during the wet season, the values of the physical parameters were within WHO limits. The pH was slightly acidic (Mean ± SD: dry season, 6.04 ± 0.66; wet, 6.43 ± 0.62) and may be attributed to emissions from gas flaring and petroleum refining activities, which is common in the area. While the total coliform counts reflected the unsanitary habits of the well users, the detection of faecal coliforms exceeding recommended numbers in 63% of the wells render them unfit for domestic use. The public health implication is obvious considering the increasing number of people using the wells due to the rapid urbanization of the oil-rich region.     

Seasonal and spatio-temporal distribution of faecal-indicator bacteria in Tyume River in the Eastern Cape Province, South Africa

We assessed the incidence of faecal-indicator bacteria in Tyume River over a 12-month period between August 2010 and July 2011. Total coliforms, faecal coliforms and enterococci were determined by the membrane filtration method. Total coliforms were detected in counts ranging from 2.1?×?10² to 3.4?×?10⁴?CFU/100 ml. Faecal coliform counts ranged from 1?×?10² to 1.6?×?10⁴?CFU/100 ml while enterococci counts were in the range of 3.3?×?10¹ to 5.1?×?10³?CFU/100 ml. Indicator bacteria counts increased from upstream to downstream sampling sites. Counts of indicator bacteria at all sites were significantly affected by seasonal changes. The bacteriological qualities of the river water were poor, exceeding the guideline of 200 CFU/100 ml and 33 CFU/100 ml for faecal coliforms and enterococci, respectively, for recreational water. Faecal coliform counts also exceeded the 1,000 CFU/100 ml guideline for water used in fresh produce irrigation. Microbial source tracking results showed that faecal pollution was predominantly of human origin during spring at all sampling sites. During other seasons, human faecal pollution was largely confined to midstream and downstream sampling sites. Generally, the presence of faecal-indicator bacteria in the river water samples suggests faecal pollution of this freshwater resource, raising the possibility of the presence of pathogenic microorganisms in the water and a threat to public health.     

Bacteriological quality of drinking water in Nyala, South Darfur, Sudan

The objective of this study was to determine the bacterial contaminations in drinking water in Nyala city, South Darfur, Sudan with special reference to the internally displaced people camps (IDPs). Two hundred and forty water samples from different sites and sources including bore holes, hand pumps, dug wells, water points, water reservoir and household storage containers were collected in 2009. The most probable number method was used to detect and count the total coliform, faecal coliform and faecal enterococci. Results revealed that the three indicators bacteria were abundant in all sources except water points. Percentages of the three indicators bacteria count above the permissible limits for drinking water in all samples were 46.4% total coliform, 45.2% faecal coliform and 25.4% faecal enterococci whereas the highest count of the indicators bacteria observed was 1,600 U/100 ml water. Enteric bacteria isolated were Escherichia coli (22.5%), Enterococcus faecalis (20.42%), Klebsiella (15.00%), Citrobacter (2.1%) and Enterobacter (3.33%). The highest contamination of water sources was observed in household storage containers (20%) followed by boreholes (11.25%), reservoirs (6.24%), hand pumps (5.42%) and dug wells (2.49%). Contamination varied from season to season with the highest level in autumn (18.33%) followed by winter (13.75%) and summer (13.32%), respectively. All sources of water in IDP camps except water points were contaminated. Data suggested the importance of greater attention for household contamination, environmental sanitation control and the raise of awareness about water contamination.     

Water quality status of dugouts from five districts in Northern Ghana: implications for sustainable water resources management in a water stressed tropical savannah environment

This study was primarily aimed at investigating the physicochemical and microbial quality of water in 14 such dugouts from five districts in the northern region of Ghana. Results obtained suggest that except for colour, turbidity, total iron and manganese, many physicochemical parameters were either within or close to the World Health Organisation’s acceptable limits for drinking water. Generally, colour ranged from 5 to 750 Hz (mean 175 Hz), turbidity from 0.65 to 568 nephelometric turbidity units (NTU; mean 87.9 NTU), total iron from 0.07 to 7.85 mg/L (mean 1.0 mg/L) and manganese from 0.03 to 1.59 mg/L (mean 0.50 mg/L). Coliform counts in water from all the dugouts in both wet and dry seasons were, however, above the recommended limits for drinking water. Total and faecal coliforms ranged from 125 to 68,000 colony forming units (cfu)/100 mL (mean 10,623 cfu/100 mL) and <?1 to 19,000 cfu/100 mL (mean 1,310 cfu /100 mL), respectively. The poor microbial quality, as indicated by the analytically significant presence of coliform bacteria in all samples of dugout water, strongly suggests susceptibility and exposure to waterborne diseases of, and consequent health implications on, the many people who continuously patronise these vital water resources throughout the year. In particular, more proactive sustainable water management options, such as introduction to communities of simple but cost-effective purification techniques for water drawn from dugouts for drinking purposes, education and information dissemination to the water users to ensure environmentally hygienic practices around dugouts, may be needed.     

Monitoring E. coli and total coliforms in natural spring water as related to recreational mountain areas

Natural spring water has unique properties, as it is rich in minerals that are considered to be beneficial to human health. A survey of the microbiological quality of natural spring water was conducted to assess possible risks from the consumption of the water by visitors in recreational mountain areas located in Seoul, South Korea. The densities of total coliforms and Escherichia coli were measured during the spring and the summer of 2002 to investigate the presence of coliform bacteria in the drinking spring waters. Total coliforms were detected in all samples and the mean density of total coliforms was up to a maximum of 228 CFU/mL. Detectable E. coli was found in 78% of all samples and the mean densities of E. coli varied from a minimum of 0 CFU/mL to a maximum of 15 CFU/mL in all samples. Malfunctioning septic systems and wildlife population appear to be the main source of E. coli contamination. Presence of E. coli in natural spring water indicates potential adverse health effects for individuals or populations exposed to this water. The fecal contaminated spring water may present an unacceptable risk to humans if it is used as raw drinking water.     

Leachate Characterization and Assessment of Groundwater Pollution Near Municipal Solid Waste Landfill Site

Leachate and groundwater samples were collected from Gazipur landfill-site and its adjacent area to study the possible impact of leachate percolation on groundwater quality. Concentration of various physico-chemical parameters including heavy metal (Cd, Cr, Cu, Fe, Ni, Pb and Zn) and microbiological parameters (total coliform (TC) and faecal coliform (FC)) were determined in groundwater and leachate samples. The moderately high concentrations of Cl⁻, NO⁻ ₃, SO²⁻ ₄, NH⁺ ₄, Phenol, Fe, Zn and COD in groundwater, likely indicate that groundwater quality is being significantly affected by leachate percolation. Further they proved to be as tracers for groundwater contamination. The effect of depth and distance of the well from the pollution source was also investigated. The presence of TC and FC in groundwater warns for the groundwater quality and thus renders the associated aquifer unreliable for domestic water supply and other uses. Although some remedial measures are suggested to reduce further groundwater contamination via leachate percolation, the present study demand for the proper management of waste in Delhi.     

Intensive water quality monitoring in a Taiwan bathing beach

A total of 357 water samples were collected from a public beach in northern Taiwan during beach season, and the densities of enterococci were analyzed by Enterolert methods. The mean enterococci level was 356 MPN/100 ml and ranged from <10 to 2,005 MPN/100 ml, which was classified as high contamination level according to the WHO water quality guideline (95 percentile >1,000 MPN/100 ml). Most of the deteriorated water quality conditions occurred during rainfall. By excluding data from the rain days, the overall beach water quality would be considered in the moderate contamination level (95 percentile 200-1,000 MPN/100 ml). Among the selected microbiological parameters tested, the densities of total coliforms and enterococci exhibited the highest correlation (r = 0.449, p = 0.009), followed by the concentrations of total coliforms and fecal coliforms (r = 0.403, p = 0.02). Nonetheless, no significant correlation was found between enterococci and fecal coliform levels (r = 0.197, p = 0.271).     

Occurrence of Giardia and Cryptosporidium in Italian water supplies

A total of 21 samples: raw water (RW) samples; water samples after coagulation with aluminium sulfate (clarified water: CW); and water after chlorination (treated water: TW) from a water purification plant that treats river surface water from the neighbourhood of Foggia (Italy), were analysed for the presence of Giardia cysts and Cryptosporidium oocysts. Bacteriological indicator of faecal contamination (total and faecal coliforms, faecal streptococci,), total bacterial count at 22 and 36 degrees C and physicochemical parameters (turbidity, temperature, pH) were evaluated. Cryptosporidium oocysts were not found in any samples examined, while Giardia cysts were found only in RW samples, with the maximal concentration of 8 cysts/100 l. A positive correlation was found between the Giardia densities and quality parameters such as TC, FC and TBC at 22 degrees C. Giardia levels in raw water samples correlated (p < 0.05) with TC, FC and with temperature. No other water quality parameters was consistently correlated with cysts level.     

Evaluation of simple microbiol tests for detection of fecal coliforms directly at 44.5 degrees C

Simple microbial test comprising H₂S paper strip test,presence-absence (PA) test, and fluorogenic brila broth (BB)test performed directly at 44.5 °C were evaluated andcompared with the standard most probable number (MPN) method fordetection of fecal coliforms in 173 drinking water sources. BBand PA test were comparable with standard MPN method, whereas,poor compliance was noted for H₂S test. PA test whencompared with standard MPN test only 15%; disagreement wasdetected, whereas, highest disagreement of 40%; was observed incase of H₂S test. BB test was found to be highly sensitiveas only 7.8% disagreement with that of standard MPN test wasfound. Three hundred cultures obtained from positive tests wereidentified in order to evaluate the specificities of test usedin detection of fecal indicator Escherichia coli. BB testwas also found highly specific in detection of indicatororganism as compared to PA and H₂S test. Among theorganisms isolated from BB test 84.4%; of them were identifiedas E. coli as compared to 43.4 and 33.3 in PA and H₂Stest, respectively. The low incidence of recovery of E.coli (18.1%) for the standard MPN method places doubt on thevalidity of its application in tropical areas. The result ofthis investigation suggest that BB performed directly at 44.5 °C could be suitable cost effective test to assess themicrobiological quality of drinking water in India and other tropical countries.     

Chlorination and water quality monitoring within a public drinking water supply in Rawalpindi Cantt (Westridge and Tench) area, Pakistan

Concern over the presence of fecal coliform in public drinking water supplies has been expressed in recent years in Pakistan since it has been regarded as pathogenic organism of prime importance in gastroenteritis. Two major drinking water distribution systems in the Cantt area of Rawalpindi district covering the Westridge and Tench areas was monitored over a 2-month period to determine the prevalence of fecal coliform and chlorine residual. The collected samples were examined for total chlorine, free chlorine residual, chloramines, total coliforms, fecal coliforms, and turbidity. The drinking water quality monitoring in the distribution network was performed by collecting samples from water source, overhead reservoir, and residential taps. In the Westridge area, total chlorine varied from the lowest value of 0.27 mg/L at Station # W-5 to the highest value of 0.42 mg/L at Station # W-2, total coliforms varied from 1.1 to 3.6 most probable number (MPN)/100 mL with presence of Escherichia coli in all samples, total dissolved solids (TDS) ranged from 199.5 to 205 mg/L, conductivity fluctuated between 399 and 411 microS/cm, and turbidity varied from 0.43 to 0.73 NTU. In the Tench area, the value of total chlorine ranged from 0.14 mg/L at Station # T-7 to 0.55 mg/L at Station # T-1. Total coliform varied from 3.6 to 5.1 MPN/100 mL and fecal coliform were detected at all the stations except at Station # T-1. TDS ranged from 201.4 to 257 mg/L, conductivity varied from 343 to 513 microS/cm, and turbidity ranged between 0.66 and 1.55 NTU. It is recommended to the respective agencies to ensure that the chlorine residual is available at consumer end.     

Impact of long-term wastewater application on microbiological properties of vadose zone

Impact of wastewater irrigation on some biological properties was studied in an area where treated sewage water is being supplied to the farmers since 1979 in the western part of National Capital Territory of New Delhi under Keshopur Effluent Irrigation Scheme. Three fields were selected which had been receiving irrigation through wastewater for last 20, 10 and 5 years. Two additional fields were selected in which the source of irrigation water was tubewell. The soil bacterial and fungal population density was studied in soil layers of 0?C15, 15?C30, 30?C60 and 60?C120 cm depths. Groundwater samples were collected from the piezometers installed in the field irrigated with sewage water for last 20, 10 and 5 years. Results indicate that there was significant increase in bacterial and fungal count in sewage-irrigated soils as compared to their respective control. The population density of bacteria and fungi in waste water-irrigated soils increased with the duration of sewage water application and decreased with increasing depth. The bacterial and fungal count was also directly proportional to organic carbon, sand and silt content and negatively correlated to the clay content, electrical conductivity, pH and bulk density of the soil. Groundwater under sewage-irrigated fields had higher values of most probable number (MPN) index as compared to that of tubewell water-irrigated fields. All the shallow and deep groundwaters were found to be contaminated with faecal coliforms. The vadose zone had filtered the faecal coliform to the tune of 98?C99%, as the MPN index was reduced from ??18,000 per 100 ml of applied waste water to 310 per 100 ml of groundwater under 20 years sewage-irrigated field. The corresponding values of MPN were 250 and 130 per 100 ml of shallow groundwater under 10 and 05 years sewage-irrigated fields, respectively. Rapid detection of faecal contamination suggested that the Citrobacter freundii and Salmonella were dominant in shallow groundwater, while Escherichia coli was dominant in deep groundwater collected from sewage-irrigated field.     

The Quality of Water Resources in Dalmatia

The purpose of this study was to monitor and record the specific characteristics and properties of most of the important water resources in Dalmatia located in Southern Croatia for a period of 5 years (1998–2002) according to established standards for drinking water. The paper presents a detailed account of their chemical content, the classification and the concentration of salts. The bacteriological pollution levels are indicated by the total coliform bacterial levels (MPN coli/100 mL). The water characteristics are expressed by coefficients, which represent the ratios between water ingredients. The Ca/Mg eq ratio, SO₄/Cl eq ratio and K₁, K₂ for bicarbonate hardness were calculated. The hygienic characteristics of the water samples were expressed by the total coliform bacteria estimation (MPN coli/100 mL), the permanganate consumption (KMnO₄) and biological oxygen demand (BOD₅). Karst waters in Dalmatia are moderately hard, the SO₄/Cl ratio is 0.38–1.6, non-corrosive (K₁ lower than 0.2) and not significantly mineralised (< 500 mg/L minerals). Sulphate waters are generally hard, the SO₄/Cl ratio is higher than 1.6, K₁ is 0.2–0.65. Marine waters are quite hard or hard, particularly at the river estuaries, the SO₄/Cl ratio is lower than 0.38, and K₁ is higher than 0.65. The groundwater and springs in Dalmatia are less polluted than surface waters. A majority of these have a geometric average value of MPN coli < 150/100 mL of water observed in 24 of 42 locations studied. The highest bacteriological pollution was found in nine locations where MPN coli > 1000/100 mL and moderate pollution was found in nine locations where MPN coli is between 150 and 1000/100 mL of water. The physical and chemical parameters determined for the most sources in Dalmatia are safe below the international permissible limits.     

A spatial analysis of pit latrine density and groundwater source contamination

This study aims to assess the relationship between chemical and microbial contamination of groundwater sources and a range of potential hazards in two peri-urban areas of Kisumu, Kenya where shallow wells and pit latrines are widely used. From 1998 to 2004, 263 samples were taken from 61 groundwater sources and tested for thermotolerant coliforms. Eighteen of these sources were also tested for chemical contaminants, including nitrate, chloride and fluoride. The locations of all water sources, buildings and pit latrines in the study area were surveyed. Local pit latrine densities were calculated using a geographic information system. Ten out 18 samples were above the World Health Organization guideline values for nitrate, 236 out of 263 were positive for thermotolerant coliforms, and all were above the guideline values for fluoride. There was neither a relationship between thermotolerant coliform levels and daily rainfall patterns nor with sanitary risk inspection scores for samples from shallow wells (r?=?0.01, p?=?0.91, n?=?191). The density of pit latrines within a 100-m radius was significantly correlated with nitrate and chloride levels (r?=?0.64, p?=?0.004 and r?=?0.46, p?=?0.05, respectively) but not with thermotolerant coliforms (r?=?0.22, p?=?0.11). These results illustrate both the public health risks associated with shallow groundwater sources, on-site sanitation and high population density. These findings have implications for current policies that promote latrine construction, especially in peri-urban areas of high population density. More comprehensive studies of larger communities should be commissioned to extend this analysis of the links between latrine density and groundwater contamination and so identify the contingent policy risks.     

Feasibility of the hydrogen sulfide test for the assessment of drinking water quality in post-earthquake Haiti

In 2010, a magnitude 7.0 earthquake struck Haiti, severely damaging the drinking and wastewater infrastructure and leaving millions homeless. Compounding this problem, the introduction of Vibrio cholerae resulted in a massive cholera outbreak that infected over 700,000 people and threatened the safety of Haiti’s drinking water. To mitigate this public health crisis, non-government organizations installed thousands of wells to provide communities with safe drinking water. However, despite increased access, Haiti currently lacks the monitoring capacity to assure the microbial safety of any of its water resources. For these reasons, this study was designed to assess the feasibility of using a simple, low-cost method to detect indicators of fecal contamination of drinking water that could be implemented at the community level. Water samples from 358 sources of drinking water in the Léogâne flood basin were screened with a commercially available hydrogen sulfide test and a standard membrane method for the enumeration of thermotolerant coliforms. When compared with the gold standard method, the hydrogen sulfide test had a sensitivity of 65 % and a specificity of 93 %. While the sensitivity of the assay increased at higher fecal coliform concentrations, it never exceeded 88 %, even with fecal coliform concentrations greater than 100 colony-forming units per 100 ml. While its simplicity makes the hydrogen sulfide test attractive for assessing water quality in low-resource settings, the low sensitivity raises concerns about its use as the sole indicator of the presence or absence of fecal coliforms in individual or community water sources.     

Bacteriological safety assessment,hygienic habits and cross-contamination risks in a Nigerian urban sample of household kitchen environment

Urban household kitchen environment was assessed for safety by determining their levels of indicator bacteria, hygienic habits and risk of cross-contamination. Household kitchens (60) were selected in Warri Town, Nigeria, by the multi-stage sampling technique. Contact surfaces, water and indoor kitchen air were analysed for aerobic plate counts, total and faecal coliforms using Nutrient and McConkey media by swab/rinse method, membrane filtration and sedimentation methods, respectively. Hygienic habits and risk of cross-contamination were assessed with structured questionnaire which included socio-demographic variables. On the basis of median counts, the prevalence of high counts (log cfu/cm²/m³/100 mL) of aerobic plate counts (>3.0), total coliforms (>1.0) and faecal coliforms (>0) on contact surfaces and air was high (58.0–92.0%), but low in water (30.0–40.0%). Pots, plates and cutleries were the contact surfaces with low counts. Prevalence of poor hygienic habits and high risk of cross-contamination was 38.6 and 67.5%, respectively. Education, occupation and kitchen type were associated with cross-contamination risk (P = 0.002–0.022), while only education was associated with hygienic habits (P = 0.03). Cross-contamination risk was related (P = 0.01–0.05) to aerobic plate counts (OR 2.30; CL 1.30–3.17), total coliforms (OR 5.63; CL 2.76–8.25) and faecal coliforms (OR 4.24; CL 2.87–6.24), while hygienic habit was not. It can be concluded that urban household kitchens in the Nigerian setting are vulnerable to pathogens likely to cause food-borne infections.     

A field test for the assessment of faecal contamination of potable water

A simple, sensitive, rapid, inexpensive paper strip impregnated with Salmonellal E. coli medium (SEM) was formulated, and placed in a test tube. When potable water of 10 ml was added to the test tube it detected the faecal contamination of water samples within 16-48 h when incubated at room temperature from 20 to 35 degrees C. The positive results were indicated when the medium turned black (hydrogen sulfide production) for the presence of Salmonella sp. and/or the formation of a red ring (free indole from tryptophan) when a few drops of Kovac's reagent was added for the presence of coliform bacteria (E. coli). More than 600 water samples were tested with the new test (SEM) and results showed 99% agreement with that of the standard most probable number (MPN) coliform test and also proved highly successful in the field when it was employed to detect both Salmonella and E. coli. Different water testing laboratories involved in a water quality monitoring programme and governmental agencies evaluated the test media and reported that the test was user friendly, reliable and simple to perform in the field and will be especially useful for screening of both urban and rural water supplies for routine monitoring of bacteriological contamination.     

Applicability of universal Bacteroidales genetic marker for microbial monitoring of drinking water sources in comparison to conventional indicators

Water quality monitoring is essential for the provision of safe drinking water. In this study, we compared a selection of fecal indicators with universal Bacteroidales genetic marker to identify fecal pollution of a variety of drinking water sources. A total of 60 samples were collected from water sources. The microbiological parameters included total coliforms, fecal coliforms, Escherichia coli and fecal streptococci as the fecal indicator bacteria (FIB), Clostridium perfringens and H₂S bacteria as alternative indicators, universal Bacteroidales genetic marker as a promising alternative fecal indicator, and Salmonella spp., Shigella spp., and E. coli O157 as pathogenic bacteria. From 60 samples analyzed, Bacteroidales was the most frequently detected indicator followed by total coliforms. However, the Bacteroidales assay failed to detect the marker in nine samples positive for FIB and other alternative indicators. The results of our study showed that the absence of Bacteroidales is not necessarily an evidence of fecal and pathogenic bacteria absence and may be unable to ensure the safety of the water. Further research, however, is required for a better understanding of the use of a Bacteroidales genetic marker as an indicator in water quality monitoring programs.     

Analysis of elemental concentration using ICP-AES and pathogen indicator in drinking water of Qasim Abad, District Rawalpindi, Pakistan

The present study was conducted to investigate drinking water quality (groundwater) from water samples taken from Qasim Abad, a locality of approximately 5,000 population, situated between twin cities Rawalpindi and Islamabad in Pakistan. The main sources of drinking water in this area are water bores which are dug upto the depth of 250–280 ft in almost every house. The study consists of the determination of physico-chemical properties, trace metals, heavy metals, rare earth elements and microbiological quality of drinking water. The data showed the variation of the investigated parameters in samples as follows: pH 6.75 to 8.70, electrical conductivity 540 to 855 μS/cm, total dissolved solids 325.46 to 515.23 ppm and dissolved oxygen 1.50 to 5.64 mg/L which are within the WHO guidelines for drinking water quality. The water samples were analysed for 30 elements (aluminium, iron, magnesium, manganese, silicon, zinc, molybdenum, titanium, chromium, nickel, tungsten, silver, arsenic, boron, barium, beryllium, cadmium, cobalt, copper, gallium, mercury, lanthanum, niobium, neodymium, lead, selenium, samarium, tin, vanadium and zirconium) by using inductively coupled plasma atomic emission spectroscopy. The organic contamination was detected in terms of most probable number (MPN) of faecal coliforms. Overall, elemental levels were lower than the recommended values but three water bores (B-1, B-6, B-7) had higher values of iron (1.6, 2.206, 0.65 ppm), two water bores (B-1, B-6) had higher values of aluminium (0.95, 1.92 ppm), respectively, and molybdenum was higher by 0.01 ppm only in one water bore (B-11). The total number of coliforms present in water samples was found to be within the prescribed limit of the WHO except for 5 out of 11 bore water samples (B-2, B-3, B-4, B-8, B-11), which were found in the range 5–35 MPN/100 mL, a consequence of infiltration of contaminated water (sewage) through cross connection, leakage points and back siphoning.     

Relative proportions of <Emphasis Type="Italic">E. coli</Emphasis> and <Emphasis Type="Italic">Enterococcus spp.</Emphasis> may be a good indicator of potential health risks associated with the use of roof harvested rainwater stored in tanks

A total of 285 water samples were collected from 71 roof harvested rainwater tanks from four villages in different provinces over a two-year (2013–2014) period during the early (October to December) and late (January to March) rainy season. Water quality was evaluated based on Escherichia coli, faecal coliforms and Enterococcus spp. prevalence using the IDEXX Quanti-Tray quantification system. Real-Time PCR was used to analyse a subset of 168 samples for the presence of Shigella spp., Salmonella spp. and E. coli virulence genes (stx1, stx2 and eaeA). Escherichia coli were detected in 44.1% of the samples, Enterococcus spp. in 57.9% and faecal coliforms in 95.7%. The most prevalent E. coli concentrations in harvested rainwater were observed in 29.1% of samples and 22.5% for Enterococcus spp. and, were within 1–10 cfu/100 ml and 10–100 cfu/100 ml, respectively, whereas those for faecal coliforms (36.6%) were within 100–1000 cfu/100 ml. On average 16.8% of the samples had neither E. coli nor Enterococcus spp. detected, while 33.9% had only Enterococcus spp. and 23.7% had only E. coli. E. coli and Enterococcus spp. were detected together in 25.5% of the samples. Evaluation of samples for potential pathogenic bacteria showed all tested samples to be negative for the Shigella spp. ipaH gene, while five tested positive for Salmonella ipaB gene. None of the samples tested positive for the stx1 and stx2 genes, and only two tested positive for the eaeA gene. These findings are potentially useful in the development of a simplified risk assessment strategy based on the concentrations of indicator bacteria.