土壤环境中肠道致病菌的多重PCR检测研究初探

建立同时检测大肠杆菌、沙门氏菌、金黄色葡萄球菌、福氏志贺氏菌、铜绿假单胞菌等5种土壤常见肠道致病菌的多重PCR检测技术,为这些肠道致病菌感染的快速诊断提供实验依据.根据这些肠道病原菌的毒素基因、高度保守基因及特异性基因分别合成5对特异性引物,应用PCR扩增技术对目的菌株进行特异性检测.实验结果表明,5对寡核苷酸引物都具有较高的特异性和专一性,多重PCR检测限达到104cfu·g-1.多重PCR应用于土壤样品分析,极大的缩短了检测时间(仅需3～4h)、降低了检测成本,对控制病原菌的传播具有重要意义,可推广应用于环境监测、水源检测、食品卫生监督、商品检验检疫等领域.     

Uptake of radioiodide by Paenibacillus sp., Pseudomonas sp., Burkholderia sp. and Rhodococcus sp. isolated from a boreal nutrient-poor bog

Radionuclides, like radioiodine(~(129)I), may escape deep geological nuclear waste repositories and migrate to the surface ecosystems. In surface ecosystems, microorganisms can affect their movement. Iodide uptake of six bacterial strains belonging to the genera Paenibacillus,Pseudomonas, Burkholderia and Rhodococcus isolated from an acidic boreal nutrient-poor bog was tested. The tests were run in four different growth media at three temperatures. All bacterial strains removed iodide from the solution with the highest efficiency shown by one of the Paenibacillus strains with 99% of iodide removed from the solution in one of the used growth media. Pseudomonas, Rhodococcus and one of the two Paenibacillus strains showed highest iodide uptake in 1% yeast extract with maximum values for the distribution coefficient(K_d) ranging from 90 to 270 L/kg DW. The Burkholderia strain showed highest uptake in 1% Tryptone(maximum K_d170 L/kg DW). The Paenibacillus strain V0-1-LW showed exceptionally high uptake in 0.5% peptone + 0.25% yeast extract broth(maximum K_d 1,000,000 L/kg DW). Addition of 0.1% glucose to the 0.5% peptone + 0.25% yeast extract broth reduced iodide uptake at 4℃ and 20℃ and enhanced iodide uptake at 37℃ compared to the uptake without glucose. This indicates that the uptake of glucose and iodide may be competing processes in these bacteria. We estimated that in in situ conditions of the bog,the bacterial uptake of iodide accounts for approximately 0.1%–0.3% of the total sorption of iodide in the surface, subsurface peat, gyttja and clay layers.     

黄连根茎浸提物对绿藻的毒理作用

黄连根茎和制剂具有抗菌等作用,广泛用于水产养殖,所造成水生态风险需要评估.试验设置总生物碱为0(CK),0.088(T1)、0.44(T2)和1.76 mg·L-1(T3)的黄连根茎浸提液(CRE)4种处理,研究了对斜生栅藻和蛋白核小球藻的毒理作用.结果表明,T1抑制绿藻生长,T2和T3使绿藻生长和繁殖停止;它们均显著降低绿藻叶绿素和蛋白质含量,说明CRE抑制光合作用和蛋白质合成是绿藻生长繁殖速率降低和死亡的直接原因.CRE使氢离子和胞内物质外流,导致藻液p H值显著降低和电导率提高.在T1和T2处理中,绿藻细胞SOD活性先升后降;在T3处理中,SOD活性显著降低.说明在CRE暴露初期,低中浓度的CRE诱导绿藻细胞产生抗性,随暴露时间增长或直接暴露在高浓度的CRE下,抗氧化酶系统被破坏.同样,随着CRE浓度增大,丙二醛含量增加,意味着绿藻细胞膜结构破坏,透性增加.CRE总体上对蛋白核小球藻的危害作用大于斜生栅藻.在水产养殖中,滥用黄连根茎或制剂,以及大规模集约化种植黄连对水体初级生产力具有潜在的生态风险.     

双酚A对大豆、玉米和水稻叶绿素荧光反应的影响

双酚A(BPA)普遍应用在工业制成品中,因需求量递增而产生的环境安全问题引发各方关注.与BPA对植物生长影响的研究工作相比,BPA影响植物生长的机理的研究甚少.光合作用是植物生产的重要生理过程,可通过叶绿素荧光测定技术探测和分析.基于此,本文利用叶绿素荧光测定技术,研究了BPA对大豆、玉米和水稻幼苗叶绿素荧光反应的影响.结果表明,3.0 mg·L-1BPA可降低大豆和玉米初始荧光F0,增加原初光能转化效率F v/F m、实际光能转化效率ΦPSⅡ、电子传递速率ETR、光化学猝灭系数qP和非光化学猝灭系数qN,对水稻各荧光参数无影响,即3.0 mg·L-1BPA可改善大豆和玉米光合PSⅡ系统,增强光能吸收,提高光合电子传递和光能转化效率;6.0 mg·L-1BPA可增加大豆和水稻的ΦPSⅡ、ETR和qP,降低F0,除增加qN外不影响玉米的其它荧光参数,表明6.0 mg·L-1BPA能改善大豆和水稻光合PSⅡ系统,提高光能转化和电子传递效率;除10 mg·L-1BPA对水稻各荧光参数无显著影响及17.2 mg·L-1BPA增加玉米和水稻的qN外,10 mg·L-1和17.2mg·L-1BPA可增加3种作物F0,抑制其它各荧光参数,即高剂量BPA引起作物光抑制,PSⅡ中心受损,光能转化和电子传递效率降低.此外,对比3种作物荧光参数变幅可知,BPA对大豆各荧光参数的影响玉米水稻.总之,BPA对3种作物叶绿素荧光反应的影响在方式和效果上存在差异.     

农业废物好氧堆肥中环境因子对nirK、nirS和nosZ数量的影响

应用定量聚合酶链式反应(real-time PCR)技术对农业废物好氧堆肥过程中参与反硝化过程的功能基因(nirK、nirS和nosZ)丰度在堆体不同位置处随时间的变化情况进行了研究.结果表明,随着堆肥进程,3种基因数量整体呈现出先升后降的变化规律,且不同位置处的反硝化基因数量之间存在着显著的差异性.使用Canoco 4.5软件对获得的反硝化功能基因丰度数据与不同时期不同层次堆体温度、pH、含水率、NH4+-N、NO3--N和水溶性有机碳(WSC)等环境因子的相关性进行冗余分析(redundancy analysis,RDA).基于手动选择的RDA分析结果表明,WSC、NH4+-N和堆体温度对反硝化基因丰度有着显著的影响(P<0.05),且前2个因子达到了极显著水平(P<0.01).应用t-value回归分析方法单独分析每种环境因子与3种基因的相关性,其中nirK与温度和pH显著正相关(P<0.05),nirS与温度显著正相关(P<0.05),nosZ与NH4+-N显著正相关(P<0.05)、与WSC显著负相关(P<0.05).     

模拟自然水体中藻-溞-草间的相互作用研究

为了解氮磷浓度对生物操纵效果及同时恢复水生植被的影响,以小球藻、大型溞和金鱼藻分别作为浮游植物、浮游动物和大型沉水植物的代表,模拟自然条件研究了不同氮磷浓度对三者生长和相互作用的影响.结果表明:金鱼藻和小球藻共培养时,在氮浓度介于2.92～12.60mg·L-1、磷浓度介于0.06 ～0.85 mg·L-1,金鱼藻增长不明显,甚至出现负增长;而小球藻的增长率则远高于金鱼藻.小球藻和大型溞共培养时,氮、磷浓度分别为1.26～ 10.53 mg·L-1和0.04～1.16 mg·L-1时均占据优势,对小球藻的抑制效果显著,抑藻及氮磷去除效果明显好于金鱼藻和小球藻共培养,而且磷的去除效果优于氮.三者共培养时,在氮浓度介于3.15 ～23.92 mg·L-1、磷浓度介于0.07 ～0.64 mg·L-1时,大型溞与金鱼藻的增长率都较高,而小球藻则维持在较低的增长水平,水质改善效果较好;当氮、磷浓度分别升至25.95 mg·L-1和1.18 mg·L-1时,大型潘和金鱼藻的增长率均下降,水质变差.大型溞和金鱼藻的联合控藻效果好于其单一的控制效果,该效果明显受到氮磷浓度的影响.     

给水管网中耐氯性细菌的灭活特性研究

使用4种常见消毒剂对从实际管网中分离出来的7株耐氯性细菌进行消毒实验.结果表明,这7株细菌均具有较高的耐氯性,其中1株耐氯性最高的类龟分支杆菌自由氯99.9%灭活的CT值为120 mg.(L.min)-1,另外2株血红鞘氨醇单胞菌和甲基杆菌99.9%灭活的CT值分别为7 mg.(L.min)-1和4 mg.(L.min)-1.比较4种消毒剂的消毒效果发现,二氧化氯和单过硫酸氢钾的消毒效果较好,能够在30 min内使分支杆菌的灭活率达到5个数量级.自由氯由于衰减较快,消毒效果不佳.一氯胺能够维持一定的消毒剂浓度,但由于其氧化性较弱,因此需要提高浓度,才能满足消毒要求.能在1 h内灭活3个数量级以上分支杆菌的消毒剂投加量为:3.0 mg/L一氯胺、1.0 mg/L二氧化氯(以Cl2计)和1.0 mg/L单过硫酸氢钾(以Cl2计).考虑到我国水厂消毒的实际情况,建议采用间歇性提高一氯胺浓度或改换二氧化氯消毒的方法,提高对耐氯性细菌的灭活效果.     

三种大型海藻对对氯苯胺的去除行为及光合生理响应

以龙须菜、坛紫菜和石莼3种大型海藻为实验材料,通过模拟实验,研究并比较了它们对不同浓度对氯苯胺(PCA)的去除行为,以及石莼对PCA的光合生理响应.实验结果显示,7d实验结束时,3种藻类对海水中PCA的最终去除率排序分别为:6mg·L-1PCA处理组,龙须菜(58.7%)<坛紫菜(75.7%)<石莼(94.9%);60mg·L-1PCA处理组,龙须菜(50.2%)<石莼(61.3%)<坛紫菜(74.9%);海藻的培植密度越大,PCA的去除率越高,在受PCA污染的海域中大面积种植大型海藻来有效地处理修复此类污染在理论上是可行的.在不同浓度PCA处理过程中,石莼的生长受到抑制,有效光化学效率、光合作用和呼吸作用呈现出低浓度(<5mg·L-1)促进、高浓度(>10mg·L-1)抑制的现象.叶绿素、类胡萝卜素和可溶性蛋白含量在各处理组之间没有表现出确定趋势,表明PCA对石莼生长的影响可能是由于呼吸速率的增加而引起的.     

凤眼莲化感物质对铜绿微囊藻、斜生栅藻生长及细胞数相对比例的影响

为探索化感物质在蓝藻水华治理方面的应用潜力,选取在凤眼莲根系分泌物中发现的5种化感物质（亚油酸、亚油酸甘油酯、丙酰胺、N-苯基—2-萘胺和壬酸）,研究了3种剂量下（0.1、1.0、10.0mg.L-1）其对单一、混合培养铜绿微囊藻和斜生栅藻生长的影响.结果发现,化感物质成分、剂量和藻类培养方式对铜绿微囊藻和斜生栅藻生长...     

利用DGGE-菌落原位杂交法分离土壤中精喹禾灵降解菌

从自然环境中分离到的可降解农药的土著微生物,因其对环境的友好性及原位修复的可行性,受到了高度关注.为从土壤中筛选精喹禾灵降解菌株,首先利用PCR-DGGE技术分析了除草剂精喹禾灵胁迫下土壤细菌群落结构及多样性的变化.结果表明,添加精喹禾灵后,土壤细菌群落结构发生了明显的改变.精喹禾灵使细菌多样性呈现出增加-减少-增加的变化趋势,其中第9 d变化最大,后期趋于稳定.根据DGGE图谱条带的测序结果推断,Pseudomonas、Massilia、Burkholderia等属中的细菌对精喹禾灵具有耐受性或降解潜力,这些微生物类群可作为减少农药残留的土著微生物资源进行分离筛选.根据条带的测序结果,合成了地高辛(Digoxigenin)标记的探针,并进行了菌落原位杂交,筛选到了3株具有降解潜力的菌株,其中L1可以利用精喹禾灵作为唯一碳源生长,经16S rRNA基因鉴定该菌株属于假单胞菌属(Pseudomonas sp.).利用高效液相色谱法测定了菌株L1在无机盐培养基中降解精喹禾灵的效果.结果表明,培养7 d后,精喹禾灵的含量减少了近50%,且随着精喹禾灵含量的降低,L1菌体数量增加,证实了菌株L1具有降解精喹禾灵的能力.这一结果为今后研究菌株L1降解精喹禾灵的机制、功能基因等奠定了基础.     

高温堆肥过程对猪粪来源抗生素抗性基因的影响

为研究大规模好氧高温堆肥过程对猪粪来源抗生素抗性基因的影响,采用荧光定量PCR法检测了4个大环内酯类抗性基因(erythromycin resistance methylase,erm A、erm B、erm C和erm F)、3个β-内酰胺抗性基因(beta-lactamase,bla TEM、bla CTX和bla SHV)和2个喹诺酮类抗性基因(quinolone resistance,qnr A和qnr S)在堆肥过程中的变化趋势.结果表明,堆肥初期大环内酯类抗性基因含量显著高于β-内酰胺类和喹诺酮类抗性基因(P0.01),其中erm B基因丰度最高为9.88×10~8copies·g~(-1),其次是erm F为9.40×10~8copies·g~(-1).在高温堆肥结束时β-内酰胺抗性基因和喹诺酮类抗性基因丰度维持在较低水平,而大环内酯类抗性基因在堆肥结束后仍然具有较高含量.其中,erm F基因与堆肥初期相比甚至出现了增加的情况,这表明高温堆肥过程不能有效去除所有抗生素抗性基因.对于某些抗生素抗性基因,堆肥可能还是良好的生物反应器而导致抗性基因的增殖,农田中堆肥产品的施用有可能会造成抗生素抗性基因的传递.     

扑草净降解菌的分离、筛选与鉴定及降解特性初步研究

从安徽农药厂废水处理系统的活性污泥中筛选扑草净(prometryne)降解菌.通过富集驯化和选择性培养筛选纯化细菌,分离到2株细菌,分别命名为P-1、P-2.根据表型特征、生理生化特性和16S rDNA序列同源性分析:P-1为G-,鉴定为苍白杆菌属(Ochrobactrum);P-2为G+,鉴定为芽胞杆菌属(Bacillus).GenBank登录号分别为HM004554和HM004555.通过12 d液体降解实验,菌株P-1、P-2对40 mg.L-1扑草净降解率分别达到46.5%和65.4%.该研究为扑草净的生物降解与污染土壤的生物修复提供了依据.     

Bioreduction of vanadium (V) in groundwater by autohydrogentrophic bacteria: Mechanisms and microorganisms

As one of the transition metals, vanadium (V) (V(V)) in trace amounts represents an essential element for normal cell growth, but becomes toxic when its concentration is above 1 mg/L. V(V) can alter cellular differentiation, gene expression, and other biochemical and metabolic phenomena. A feasible method to detoxify V(V) is to reduce it to V(IV), which precipitates and can be readily removed from the water. The bioreduction of V(V) in a contaminated groundwater was investigated using autohydrogentrophic bacteria and hydrogen gas as the electron donor. Compared with the previous organic donors, H₂ shows the advantages as an ideal electron donor, including nontoxicity and less production of excess biomass. V(V) was 95.5% removed by biochemical reduction when autohydrogentrophic bacteria and hydrogen were both present, and the reduced V(IV) precipitated, leading to total-V removal. Reduction kinetics could be described by a first-order model and were sensitive to pH and temperature, with the optimum ranges of pH 7.5–8.0 and 35–40°C, respectively. Phylogenetic analysis by clone library showed that the dominant species in the experiments with V(V) bioreduction belonged to the β-Proteobacteria. Previously known V(V)-reducing species were absent, suggesting that V(V) reduction was carried out by novel species. Their selective enrichment during V(V) bioreduction suggests that Rhodocyclus, a denitrifying bacterium, and Clostridium, a fermenter known to carry out metal reduction, were responsible for V(V) bioreduction.     

铜绿假单胞菌对白腐菌产木质纤维素降解酶的影响

采用固态发酵的方法,考察了两株不同型号的铜绿假单胞菌（AB93066和ATCC9027）对白腐菌（黄孢原毛平革菌）产木质纤维素降解酶（木素过氧化物酶LiP、锰过氧化物酶MnP和羧甲基纤维素酶CMCase）的影响,并对酶提取液的pH值、表面张力及稻草降解残渣中挥发性有机质含量的变化进行了分析.结果表明,添加5.72%的A...     

氮负荷升高对螺-附着藻-苦草生态关系的影响

本文设计了双因子(氮负荷升高、有无螺类)受控实验,研究了氮负荷升高(太湖正常氮负荷的3倍)对螺-附着藻-苦草关系的影响.结果表明,氮负荷升高处理明显提高了水体总氮、总溶解氮、叶绿素a等指标的含量,显著增加了附着生物干重,进而抑制了苦草生长;与正常氮负荷处理组相比,3倍氮负荷处理组中苦草的相对生长率、株高和叶片数分别降低了33%、25%和13%.环棱螺降低了附着生物干重和水体叶绿素a含量,明显促进了苦草生长.氮负荷升高和环棱螺存在对水体各项理化指标、附着生物干重和苦草的各项生长指标均无交互作用.此外,氮负荷升高还降低了环棱螺的生长速率.分析认为,氮负荷升高对沉水植物生长的抑制机理主要体现在浮游藻类与附着生物生物量增加的抑制效应;环棱螺的存在虽然在一定程度上减弱了这种效应,但由于氮负荷升高还同时使环棱螺生长率降低,削弱了其对附着生物的牧食压力,从而使得附着生物对苦草生长的抑制作用加强.因此,氮负荷升高使螺-附着藻-沉水植物之间的生态关系失衡,也可能是氮浓度较高的富营养湖泊中沉水植被稀少的重要原因.     

Bioreduction of vanadium (V) in groundwater by autohydrogentrophic bacteria: Mechanisms and microorganisms

As one of the transition metals, vanadium(V)(V(V)) in trace amounts represents an essential element for normal cell growth, but becomes toxic when its concentration is above 1 mg/L. V(V) can alter cellular differentiation, gene expression, and other biochemical and metabolic phenomena. A feasible method to detoxify V(V) is to reduce it to V(IV), which precipitates and can be readily removed from the water. The bioreduction of V(V) in a contaminated groundwater was investigated using autohydrogentrophic bacteria and hydrogen gas as the electron donor. Compared with the previous organic donors,H2 shows the advantages as an ideal electron donor, including nontoxicity and less production of excess biomass. V(V) was 95.5% removed by biochemical reduction when autohydrogentrophic bacteria and hydrogen were both present, and the reduced V(IV)precipitated, leading to total-V removal. Reduction kinetics could be described by a first-order model and were sensitive to p H and temperature, with the optimum ranges of p H 7.5–8.0 and 35–40°C, respectively. Phylogenetic analysis by clone library showed that the dominant species in the experiments with V(V) bioreduction belonged to theβ-Proteobacteria. Previously known V(V)-reducing species were absent, suggesting that V(V)reduction was carried out by novel species. Their selective enrichment during V(V)bioreduction suggests that Rhodocyclus, a denitrifying bacterium, and Clostridium, a fermenter known to carry out metal reduction, were responsible for V(V) bioreduction.     

底泥对洋河水库微囊藻和鱼腥藻生长影响的研究

采用批量培养的方法研究洋河水库底泥浸出液对洋河水库微囊藻和鱼腥藻生长的影响.结果表明,厌氧条件底泥浸出液对鱼腥藻生长速率有促进作用,添加2%、20%、50%的厌氧底泥浸出液的鱼腥藻生长速率比M11培养基中分别高出36.6%、47.2%、36.0%;而添加厌氧底泥浸出液对微囊藻生长有抑制作用,微囊藻最大生物量随底泥浸出液的添加量增加而减小.与添加厌氧底泥浸出液相比,添加好氧条件的底泥浸出液对鱼腥藻生长速率也有一定的促进作用,添加20%的好氧底泥浸出液的鱼腥藻生长速率比M11培养基中高出37.2%;而添加好氧底泥浸出液对微囊藻生长影响不明显.在添加厌氧底泥浸出液的培养基中增加铁,则微囊藻的最大生物量显著增加,表明底泥浸出液对微囊藻生长的影响可能是较高浓度的有机质与铁的结合影响了微囊藻对铁的利用.     

胶质芽孢杆菌对印度芥菜富集土壤Cd及土壤pH的影响

采用根袋法盆栽试验,研究接种活菌量浓度分别为1×1010 cfu·kg-1 (T1)和2×1010 cfu·kg-1(T2)的胶质芽孢杆菌,对印度芥菜富集土壤Cd、土壤有效态Cd含量及土壤pH的影响.结果表明,以不接种菌液作为对照,处理T1、T2地上部分生物富集系数分别为13.58、16.83,与对照相比分别提高42.95％、77.16％;地下部分生物富集系数分别为4.35、4.83,分别比对照提高24.64％、38.40％;土壤的净化率分别是对照的1.73、2.20倍.对照组土壤有效态Cd含量随着时间的延长而降低,根际和非根际土壤分别降低32.93％和45.54％;但T1和T2处理中,根际、非根际土壤有效态Cd含量分别提高15.15％、31.73％和36.54％、45.28％.收获时,处理T1、T2根际土壤pH降低率分别是对照的1.08、1.10倍.不同浓度胶质芽孢杆菌处理下土壤pH与有效态Cd含量均呈显著负线性关系.综上,胶质芽孢杆菌主要是通过改变土壤pH来影响土壤Cd生物有效性,从而促进超富集植物的修复效果.本研究可为微生物辅助植物修复重金属污染土壤提供一定理论依据和实践指导.     

Microcystis aeruginosa/Pseudomonas pseudoalcaligenes interaction effects on off-flavors in algae/bacteria co-culture system under different temperatures

We conducted an experiment to study the interaction effects of Microcystis aeruginosa and Pseudomonas pseudoalcaligenes on off-flavors in an algae/bacteria co-culture system at three temperatures (24, 28 and 32°C). Gas chromatography–mass spectrometry was applied to measure off-flavor compounds dimethyl sulfide (DMS), dimethyl trisulfide (DMTS), 2-methylisoborneol, geosmin (GEO) and β-cyclocitral. During the lag phase of co-cultured M. aeruginosa (first 15 days), P. pseudoalcaligenes significantly increased the production of DMS, DMTS and β-cyclocitral at all three temperatures. In the exponential phase of co-cultured M. aeruginosa (after 15 days), M. aeruginosa became the main factor on off-flavors in the co-culture system, and β-cyclocitral turned to the highest off-flavor compound. These results also indicated that DMS, DMTS and β-cyclocitral were the main off-flavor compounds in our M. aeruginosa/P. pseudoalcaligenes co-culture system. Univariate analysis was applied to investigate the effects of M. aeruginosa and P. pseudoalcaligenes on the production of off-flavors. The results demonstrated that both M. aeruginosa and P. pseudoalcaligenes could increase the production of DMS and DMTS, while β-cyclocitral was mainly determined by M. aeruginosa. Our results also provide some insights into understanding the relationship between cyanobacteria and heterotrophic bacteria.