The effect of positive interactions on community structure in a multi-species metacommunity model along an environmental gradient

Positive interactions are widely recognized as playing a major role in the organization of community structure and diversity. As such, recent theoretical and empirical works have revealed the significant contribution of positive interactions in shaping species’ geographical distributions, particularly in harsh abiotic conditions. In this report, we explore the joint influence of local dispersal and an environmental gradient on the spatial distribution, structure and function of communities containing positive interactions. While most previous theoretical efforts were limited to modelling the dynamics of single pairs of associated species being mutualist or competitor, here we employ a spatially explicit multi-species metacommunity model covering a rich range of interspecific interactions (mutualism, competition and exploitation) along an environmental gradient. We find that mutualistic interactions dominate in communities with low diversity characterized by limited species dispersal and poor habitat quality. On the other hand, the fraction of mutualistic interactions decreases at the expense of exploitation and competition with the increase in diversity caused by higher dispersal and/or habitat quality. Our multi-species model exemplifies the ubiquitous presence of mutualistic interactions and the role of mutualistic species as facilitators for the further establishment of species during ecosystem assembly. We therefore argue that mutualism is an essential component driving the origination of complex and diverse communities.     

Ranking of individual mountain birch trees in terms of leaf chemistry: seasonal and annual variation

Summary. The quality of tree leaves as food for herbivores changes rapidly especially during the spring and early summer. However, whether the quality of an individual tree in relation to other trees in the population changes during the growing season and between years is less clear. We studied the seasonal and annual stability of chemical and physical traits affecting leaf quality for herbivores. Rankings of trees in terms of the contents of two major groups of phenolics in their leaves, hydrolyzable tannins and proanthocyanidins (condensed tannins), were very stable from the early spring to the end of the growing season. There were also strong positive within-season correlations in the levels of some other groups of phenolics in the leaves (kaempferol glycosides, myricetin glycosides and p-coumaroylquinic acid derivatives). The contents of individual sugars and the sum content of protein-bound amino acids showed patterns of seasonal consistency in mature leaves, but not in young developing leaves. The seasonal correlations in leaf water content and toughness were also strongest in mature leaves. The correlations between two years at corresponding times of the growing season were strongly positive for the major groups of phenolics throughout the season, but were more variable for the contents of proteins and some sugars. Leaf toughness and water content showed strong positive correlations in mature leaves. Despite the consistency of tree ranking in terms of leaf phenolics, the relative resistance status of trees may, however, change during a growing season because there was a negative correlation between the content of hydrolyzable tannins (early-season resistance compounds) in leaves early in the season and the content of proanthocyanidins (late-season resistance compounds) late in the season, and vice versa. Thus, assuming that phenolics affect herbivore preference and performance, different plants may suffer damage at different times of the growing season, and the overall variation between trees in the fitness consequences may be low. In addition, the adaptation of herbivorous insects to mountain birch foliage in general, as well as to specific tree individuals, may be constrained by variation in the relative resistance status of the trees.     

The Effects of Acidity on Carbon Fluxes from Ombrotrophic Peat

Replicate intact peat/vegetation monoliths were collected along a pollution gradient in the UK and subjected over one year to 1200 mm of simulated rainfall of the same chemical composition as they received in the field. Drainage water was analysed periodically for DOC and pH, and the decomposition rates of Calluna vulgaris and Eriophorum angustifolium leaves were measured, as well as soil atmosphere CO₂ contents and peat matric potentials. the chemical characteristics of the peats as initially sampled from the field also were determined. the results suggest that acidic precipitation has induced chemical changes in ombrotrophic peats, lowering their pH and base status, when due account is taken of calcium deposition or any mineral content. Greater DOC fluxes were observed from the more acid peats, and litter decomposition rates from these peats were reduced.     

Heat resistance of gametes of marine invertebrates in relation to temperature conditions under which the species exist

It is the purpose of this paper to elucidate the possible role of the heat resistance level of mature gametes and embryos of poikilotherms in the adaptation of a species to environmental temperature conditions. Within a species, heat resistance of gametes does not undergo any recognisable changes even in the presence of significant fluctuations in temperature. Evidence in support of this statement was obtained on gametes of invertebrates belonging to different populations of the same species collected in different seasons, and on invertebrates maintained under different temperatures. The heat resistance of gametes is correlated with the degree of thermophily of the species concerned. Species living under similar temperature conditions exhibit minimal, if any, differences in heat resistance. Hence, the heat resistance level of their gametes is a function of temperature conditions of formation and existence of the species as a whole. During the ontogenesis of poikilotherms, eggs, zygotes and early stages of embryonic development are most susceptible to heat injury. The upper thermal limit for the normal development of eggs and embryos is only 1 to 3C^o higher than the temperatures encountered under natural conditions. It is concluded that the heat resistance level of gametes and embryos represents an adjustment to temperatures at which spawning, fertilisation and earlier embryonal development occur. Temperatures which, throughout the year, exceed the upper thermal limit or remain below the lower thermal limit for the development of embryos, act as limiting factors for the species' distribution.     

上海市公园绿地常见落叶树木叶片汞浓度时空特征及环境意义

植物叶片汞浓度与大气气态单质汞(GEM/Hg0)浓度的线性关系表明叶片汞浓度大小可用于指示植物生长区内GEM浓度的高低水平.通过分析上海市绿地公园(25座)中常见落叶树木樱花、水杉、法桐叶片汞浓度的时空变化特征,探究区域内GEM含量水平及分布特征.2017年5-10月对7座公园中这3种树木叶汞浓度进行连续监测,结果显示...     

Optimization of methyl orange removal from aqueous solution by response surface methodology using spent tea leaves as adsorbent

The effective disposal of redundant tea waste is crucial to environmental protection and comprehensive utilization of trash resources. In this work, the removal of methyl orange （MO） from aqueous solution using spent tea leaves as the sorbent was investigated in a batch experiment. First, the effects of various parameters such as temperature, adsorption time, dose of spent tea leaves, and initial concentration of MO were investigated. Then, the response surface methodology （RSM）, based on Box- Behnken design, was employed to obtain the optimum adsorption conditions. The optimal conditions could be obtained at an initial concentration of MO of 9.75 mg·L-1, temperature of 35.3℃, contact time of 63.8 min, and an adsorbent dosage 3.90 g· L-1. Under the optimized condi- tions, the maximal removal of MO was 58.2%. The results indicate that spent tea leaves could be used as an effective and economical adsorbent in the removal of MO from aqueous solution.     

Preliminary Evaluation of the Use of Phosphogypsum for Reef Substrate. I. A Laboratory Study of Bioaccumulation of Radium and Six Heavy Metals in an Aquatic Food Chain

Phosphogypsum (PG), a solid by-product of phosphoric acid production, contains radionuclides and trace metals in concentrations which may pose a potential hazard to human health and the environment. to investigate the possibility of bioaccumulation of radium and six heavy metals over time when aquatic organisms experience both trophic and environmental exposure to PG, we designed a laboratory experiment representing three levels of an aquatic food chain. During the 135 day experiment, a meiobenthic copepod species (Amphiascoides atopus) was cultured in the presence of PG. the copepods were subsequently fed to grass shrimp (Palaemonetes vulgaris and P. pugio) which were in turn fed to gulf killifish (Fundulus grandis); both the grass shrimp and the killifish also experienced an environmental PG exposure. Other than elevated radium levels in the experimental grass shrimp, the experiment demonstrated little effect of environmental or trophic exposure to PG on microinvertebrates, macroinvertebrates, or fishes that could be attributed to PG. in all cases where increased concentrations were indicated within the experimental group, roughly equivalent increases in metal concentrations also occurred in the control group.     

Community diversity and distribution of ammonia-oxidizing archaea in marsh wetlands in the black soil zone in North-east China

AOA amoA genes in the soils of the two wetlands affiliated with three lineages. The main drivers of AOA community were pH and total organic carbon and ammonium. The soil characteristics rather than the vegetation control the AOA community. Since its first detection, ammonia-oxidizing archaea (AOA) have been proven to be ubiquitous in aquatic and terrestrial ecosystems. In this study, two freshwater marsh wetlands- the Honghe wetland and Qixinghe wetland – in the black soil zone in North-east China were chosen to investigate the AOA community diversity and distribution in wetland soils with different vegetation and depth. In the Honghe wetland, two sampling locations were chosen as the dominant plant transited from Deyeuxia to Carex. In the Qixinghe wetland, one sample location that was dominated by Deyeuxia was chosen. Samples of each location were collected from three different depths, and Illumina MiSeq platform was used to generate the AOA amoA gene archive. The results showed that the AOA amoA genes in the soils of the two wetlands were affiliated with three lineages: Nitrososphaera, Nitrosotalea, and Nitrosopumilus clusters. The different dominant status of these AOA lineages indicated their differences in adapting to acidic habitat, oxygenic/hypoxic alternation, organic matter, and other environmental factors, suggesting high diversity among AOA in marsh soils. The main driver of the AOA community was pH, along with organic carbon and ammonium nitrogen, which also played an important role combined with many other environmental factors. Thus, soil physiochemical characteristics, rather than vegetation, were the main cause of AOA community diversity in the wetlands in the black soil zone in China.     

Some Preliminary Observations On Zinc and Cadmium Accumulative Capacity in Arum Italicum Mill

Pot and hydroponic trials as well as tests on samples collected in a mining area and in two different urban sites of Tuscany were carried out on Arum italicum Mill (Italian arum) plants. Zinc and cadmium contents were determined by differential pulse anodic stripping voltammetry (DPASV) in different organs of about 180 samples. After 65 days treatment, zinc and cadmium median contents in leaves of plants grown hydroponically in solutions containing both metals at different concentrations fell within the range of 281-2022 and 8.3-45.1 μg g^-1 (dry weight), respectively. Some Italian arum plants were also cultivated in pots in the presence or absence of malate or citrate in order to evaluate the role of these ligands in zinc and cadmium accumulation. Citrate enhanced cadmium uptake compared to malate.     

Nutritional quality of phloem sap in relation to host plant-alternation in the bird cherry-oat aphid

Summary. Host alternation in aphids has been attributed to complementary growth of host plants, or more specifically to seasonal changes in the nitrogen quality of the phloem sap. In this report, seasonal fluctuation of free amino acids in phloem of the winter and summer host plants (Prunus padus, bird cherry and Hordeum vulgare, barley) of Rhopalosiphum padi (the bird cherry-oat aphid) were investigated in the context of aphid growth and behaviour. Phloem was collected from the cut stylets of aphids taken from plants that were grown outdoors. The total concentration of amino acids in P. padus phloem increased between bud break and late flush (spring), decreased in mature leaves (summer), and increased again in early senescent leaves (autumn). In H. vulgare, however, amino acid concentration fluctuated less from seedlings to flowering. Spring aphids from P. padus grew rapidly on this host from bud break to late flush, but died on mature and early senescent leaves. Summer aphids from H. vulgare grew as fast on this host as spring aphids did on flush leaves of P. padus. Sexual females grew more slowly than other generations and nearly as well on mature as on early senescent P. padus leaves. As judged by aphid growth and phloem nitrogen quality, P. padus during spring equals the summer host H. vulgare. However, the lower growth rates of R. padi on mature and senescent leaves of P. padus appear only loosely correlated with phloem amino acid concentrations. Therefore, factors influencing aphid nutrition, or ecology, other than seasonal changes in phloem sap amino acid concentration may explain the existence of host alternation in R. padi.     

Phylogenetic diversity of NO reductases,new tools for nor monitoring,and insights into N2O production in natural and engineered environments

● 548 representative nor genes were collected to create complete phylogenetic trees. ● The distribution of nor and nod genes were detected in 18 different phyla. ● The most conserved amino acids in NOR were located adjacent to the active site. ● nor-universal and Clade-specific primers were designed, suggested, and tested. Nitric oxide reductases (NORs) have a central role in denitrification, detoxification of nitric oxide (NO) in host-pathogen interactions, and NO-mediated cell-cell signaling. In this study, we focus on the phylogeny and detection of qNOR and cNOR genes because of their nucleotide sequence similarity and evolutionary relatedness to cytochrome oxidases, their key role in denitrification, and their abundance in natural, agricultural, and wastewater ecosystems. We also include nitric oxide dismutase (NOD) due to its similarity to qNOR. Using 548 nor sequences from publicly accessible databases and sequenced isolates from N₂O-producing bioreactors, we constructed phylogenetic trees for 289 qnor/nod genes and 259 cnorB genes. These trees contain evidence of horizontal gene transfer and gene duplication, with 13.4% of the sequenced strains containing two or more nor genes. By aligning amino acid sequences for qnor + cnor, qnor, and cnor, we identified four highly conserved regions for NOR and NOD, including two highly conserved histidine residues at the active site for qNOR and cNOR. Extending this approach, we identified conserved sequences for: 1) all nor (nor-universal); 2) all qnor (qnor-universal) and all cnor (cnor-universal); 3) qnor of Comamonadaceae; 4) Clade-specific sequences; and 5) nod of Candidatus Methylomirabilis oxyfera. Examples of primer performance were confirmed experimentally.     

Anaerobic phenanthrene biodegradation with four kinds of electron acceptors enriched from the same mixed inoculum and exploration of metabolic pathways

Anaerobic phenanthrene biodegradation enriched process was described in detail. The enriched bacterial communities were characterized under four redox conditions. The enriched archaeal communities were stated under high percentage conditions. Relatively intact pathways of anaerobic phenanthrene biodegradation were proposed. Polycyclic aromatic hydrocarbons (PAHs) are widespread and persistent contaminants worldwide, especially in environments devoid of molecular oxygen. For lack of molecular oxygen, researchers enhanced anaerobic zones PAHs biodegradation by adding sulfate, bicarbonate, nitrate, and iron. However, microbial community reports of them were limited, and information of metabolites was poor except two-ring PAH, naphthalene. Here, we reported on four phenanthrene-degrading enrichment cultures with sulfate, bicarbonate, nitrate, and iron as electron acceptors from the same initial inoculum. The high-to-low order of the anaerobic phenanthrene biodegradation rate was the nitrate-reducing conditions>sulfate-reducing conditions>methanogenic conditions>iron-reducing conditions. The dominant bacteria populations were Desulfobacteraceae, Anaerolinaceae, and Thermodesulfobiaceae under sulfate-reducing conditions; Moraxellaceae, Clostridiaceae, and Comamonadaceae under methanogenic conditions; Rhodobacteraceae, Planococcaceae, and Xanthomonadaceae under nitrate-reducing conditions; and Geobacteraceae, Carnobacteriaceae, and Anaerolinaceae under iron-reducing conditions, respectively. Principal component analysis (PCA) indicated that bacteria populations of longtime enriched cultures with four electron acceptors all obtained significant changes from original inoculum, and bacterial communities were similar under nitrate-reducing and iron-reducing conditions. Archaea accounted for a high percentage under iron-reducing and methanogenic conditions, and Methanosarcinaceae and Methanobacteriaceae, as well as Methanobacteriaceae, were the dominant archaea populations under iron-reducing and methanogenic conditions. The key steps of phenanthrene biodegradation under four reducing conditions were carboxylation, further ring system reduction, and ring cleavage.     

沉积物与盐度对罗红霉素生物有效性的影响

在河口环境,沉积物与盐度对抗生素的生物有效性有重要影响。使用超高效液相色谱-串联质谱(UPLC-MS/MS)分析单一和复合控制系统(水、水-沉积物、水-斑马鱼、水-沉积物-斑马鱼)中的各相态中的罗红霉素,以期量化各相态中罗红霉素的迁移、分布。随着暴露时间延长,水体中罗红霉素浓度不断减少,沉积物和斑马鱼体内罗红霉素不断蓄积。沉积物的存在会减少罗红霉素在斑马鱼中的生物有效性。在高盐度环境下,沉积物拥有更大的吸附效率,符合盐析效应,导致罗红霉素的生物有效性及斑马鱼富集能力下降。水-沉积物-斑马鱼系统达平衡时,沉积物为罗红霉素的主要富集场所,可积累42.0%的罗红霉素。同时,斑马鱼可吸收和富集0.16%的罗红霉素。上述研究为研究抗生素环境行为和毒理提供了参考。     

海洋环境基因组学在海洋生态研究中的应用

海洋环境基因组学是功能基因组学的一个分支学科,它将基因组学的最新技术引入到海洋生态环境的研究当中,得到了许多有价值的研究成果,显示出巨大的发展潜力。文章总结了海洋环境基因组学所开展的工作和已取得的成果,指出目前海洋环境基因组学的工作主要集中在三个领域:海洋生物基因资源文库的建立与完善;海洋生物对环境胁迫的应激反应及生理机制的研究;探索不同生物种群的基因表达谱是否与生物地理分布相关联。并着重讨论了利用基因组学技术研究环境胁迫对海洋生物物种的分布、生物物种间的相互作用以及水生物疾病的影响。如海洋环境基因组学通过测定基因表达谱的变化,研究海洋生物对环境温度的生理响应,绘制出生物地理图谱;通过测定基因转录水平的变化,更深入地了解温度变化所造成的生理支出,从而预测热气候漂移可能给海洋生态环境所造成的影响。在水生物疾病的研究方面,海洋环境基因组学用DNA微阵列技术分析染病生物的基因表达谱,筛选出发生变化的基因表达,为理解病毒感染机制提供了大量信息。还可以深入研究环境胁迫因子与微生物种群群落的组成关系,并由此找到通过维持水体的微生态平衡来消除某些病害发生的环境条件。     

Potential environmental factors influencing mucilage formation in the northern Adriatic Sea

In the northern Adriatic Sea, Mediterranean Sea, the mucilage phenomenon is usually related to the aggregation of extracellular organic matter of phytoplanktonic origin under special seasonal and trophic conditions. Environmental factors, such as temperature, salinity, nitrogen, phosphorus and N/P ratio as well as polysaccharide and monosaccharide levels in the presence and absence of mucilage were investigated in the northern Adriatic Sea. Variations in temperature and salinity during spring in years characterised by mucilage events have been recognised having an important role in preparing a favourable physical environment where mucilage formation could take place. Since the DIN/TP ratio increased markedly during the spring months (March–April) in 2002, 2003 and 2004, preceding the early summer mucilage outbreaks, it appeared that the DIN/TP ratio may be a more robust predictor than the DIN/DIP ratio, which, although more commonly used, exhibited a discontinuous trend. The contents of total carbohydrates, including monosaccharides and polysaccharides, in seawater also varied according to the presence or absence of mucilage, with an increase of polysaccharide levels during the late spring or early summer in the period of the mucilage appearance. The role of carbohydrates in the macro-aggregate formation was also investigated.     

Epiphytic Lichens and Tree Leaves As Biomonitors of Trace Elements Released By Geothermal Power Plants

Leaves of the oak, Quercus cerris, and thalli of the epiphytic lichen, Parmelia caperata, from the Travale-Radicondoli geothermal area (central Italy) were analyzed for their trace elements (As, B, Cd, Cu, Fe, Hg, Mn, Pb, Zn). the results showed that concentrations of arsenic and boron in leaf and lichen samples were higher than in remote areas. the mean concentrations of many trace elements were higher in lichens than in oak leaves, suggesting that these organisms can be used in similar biomonitoring studies. the levels of boron and manganese were higher in tree leaves, so that for these two elements, the higher plant foliage could constitute a better biomonitor than lichens. the correlations found between the concentrations of cadmium and manganese in leaves and lichens suggests foliar leaching and washing of the elements down the tree trunk, where lichens may intercept them.     

Discriminating zooplankton assemblages through multivariate methods: A case for a tropical polluted harbour and Bar-built estuary

A comparative study (June-July 2001) on zooplankton community structure amid polluted conditions in a stagnant harbour and relatively unaffected tidal estuary near Visakhapatnam, on the east coast of India, revealed a marked disparity in species composition and abundance. While the harbour supported a rich population of calanoids (46.4%), the estuary sustained mostly cyclopoids (55.2%). Univariate and multivariate techniques (species diversity, clustering, non-metric multi-dimensional scaling and one-way ANOSIM) revealed the existence of two differing zooplankton assemblages and associated water quality (similarity 50.6%). While the estuary is typified by high amounts of dissolved silica (67.4 ± 17.7 μmol l^-1) linked with monsoon influx, the harbour waters revealed abnormal levels of phosphate (40.9 ± 9.2 μmol l^-1) and nitrate (15.3 ± 5.41 μmol l^{- 1}) suggestive of intense eutrophication, caused by the discharge of fertilizer-factory waste and domestic sewage. On the basis of routines (e.g. BVSTEP, SIMPER) implemented in Plymouth Routines in Multivariate Ecological Research, it was possible to demonstrate that while species such as Oithona rigida, Oithona brevicornis, crustacean nauplii, gastropod veligers, Acartia spinicauda, and Acartia centrura played a key role in discriminating the zooplankton assemblage in the estuary, Acrocalanus spp. (mainly Acrocalanus gracilis) played a keyed role in harbour waters. Canonical Correspondence Analysis revealed species-environment relationships; for example, while the distribution of Oithona spp. and its associates in the estuary corresponded intimately with high silicate, temperature, and low salinity, it was high salinity, phosphate, and nitrate in the harbour channel that supported a different assemblage of copepods dominated by calanoids.     

Daphne: a new multimetric benthic index for the quality assessment of marine coastal environment in the Northern Adriatic Sea

A new benthic index, named Daphne, is proposed for the Northern Adriatic coastal area, near the Po river delta. It is based on six characteristics of the community that do not require in-depth taxonomic expertise: number of mollusc species, % of bivalves, % of polychaetes, abundance of the opportunistic species Corbula gibba, % of amphipods and number of 'typical mollusc species' that are individuated by multivariate analysis. The application of the index in selected stations along a gradient of decreasing disturbance shows that it is simple to use in regular monitoring campaigns and that the results are consistent with environmental quality data in the special conditions of this area subjected to considerable river runoff. The index can be used in addition and as a complement to more widespread indices (such as M-AMBI); a comparison of the two indices performance is discussed.     

The Application of A Tiered Testing Approach to the Management of Dredged Sediments for Disposal at Sea in Canada

Canada, and other signatories to the London Convention 1972 on the prevention of marine pollution by dumping, are preparing to ratify a 1996 Protocol to this convention. Among the improvements to this international agreement, is a new process for the Assessment of Waste and Other Matter, which is to be adopted by signatory parties. the process includes a step in which material considered potentially acceptable for sea disposal must be characterized by chemical, physical and biological properties. Canada's interpretation and intended implementation of this characterization step is presented for the assessment of dredged sediments. This tiered testing approach involves using chemical screening limits for contaminants, and biological testing when screening levels are exceeded. Dredged material containing specified substances (e.g., cadmium, mercury, PAHs, PCBs, etc.) below or at screening levels would generally be considered of little environmental concern for disposal at sea. Wastes above the screening levels would require more detailed assessment before their suitability for disposal at sea could be determined.     

Occurrence of the Dinoflagellate Gymnodinium Catenatum (Graham) Along the Mediterranean Coast of Alexandria (Egypt)

A monitoring programme during 4 years (1993-1996) was established in four eutrophic marine basins along the Mediterranean coast of Alexandria (Egypt) to follow the occurrence of a newly recorded dinoflagellate Gymnodinium catenatum and ambient environmental conditions. the species achieved its massive occurrence in warm seasons at low salinity, density stratified water column and different nutrient concentrations. A simple statistical approach showed temperature and phosphate to effect its distribution. Apparently no cases of toxic effect have accompanied the occurrence of G. catenatum. the regular occurrence of the species during the 4 year survey mean the existence of its benthic resting cysts, which certainly have important implications for its distribution dynamics.