Response of Avian Communities to Historic Habitat Change in the Northern Chihuahuan Desert

Abstract: Throughout much of the northern Chihuahuan Desert, the grasslands that were widespread at the time of European settlement have been replaced by desert shrublands. Little is known about the effects of this change on avian communities. We analyzed historic U.S. Government Land Office records to assess large-scale changes in vegetation cover from the 1880s to the present day. We studied vegetation and avian communities in one grassland habitat type and four desert shrubland habitat types to examine (1) how breeding-bird communities may have changed in response to habitat conversion from grassland to desert shrubland and (2) whether breeding-bird communities differ among the four desert shrubland habitat types that compose Chihuahuan Desert scrub in this region. To estimate the characteristics of 1880s black grama (    Bouteloua eriopoda ) grassland, we focused on plots located within extensive patches of present-day black grama and compared the avian communities found there with those in desert shrubland. Species richness was higher in desert shrubland than grassland. Among the desert shrubland habitat types, species richness was consistently highest in mesquite. Avian abundance patterns differed among the four desert shrubland habitat types. At least 30% of the avian community in each habitat pair was distinct. Conversion of grassland to shrubland in south-central New Mexico has likely been accompanied by a major turnover in the avian community. Remaining tracts of black grama provide habitat for species that may be uniquely adapted to the northern Chihuahuan Desert and should be protected.     

The Importance of Being Spatial (and Reserved): Assessing Northern Spotted Owl Habitat Relationships with Hierarchical Bayesian Models

Abstract:  Regional conservation planning increasingly draws on habitat suitability models to support decisions regarding land allocation and management. Nevertheless, statistical techniques commonly used for developing such models may give misleading results because they fail to account for 3 factors common in data sets of species distribution: spatial autocorrelation, the large number of sites where the species is absent (zero inflation), and uneven survey effort. We used spatial autoregressive models fit with Bayesian Markov Chain Monte Carlo techniques to assess the relationship between older coniferous forest and the abundance of Northern Spotted Owl nest and activity sites throughout the species' range. The spatial random-effect term incorporated in the autoregressive models successfully accounted for zero inflation and reduced the effect of survey bias on estimates of species–habitat associations. Our results support the hypothesis that the relationship between owl distribution and older forest varies with latitude. A quadratic relationship between owl abundance and older forest was evident in the southern portion of the range, and a pseudothreshold relationship was evident in the northern portion of the range. Our results suggest that proposed changes to the network of owl habitat reserves would reduce the proportion of the population protected by up to one-third, and that proposed guidelines for forest management within reserves underestimate the proportion of older forest associated with maximum owl abundance and inappropriately generalize threshold relationships among subregions. Bayesian spatial models can greatly enhance the utility of habitat analysis for conservation planning because they add the statistical flexibility necessary for analyzing regional survey data while retaining the interpretability of simpler models.     

Relationships between Human Disturbance and Wildlife Land Use in Urban Habitat Fragments

Abstract: Habitat remnants in urbanized areas typically conserve biodiversity and serve the recreation and urban open‐space needs of human populations. Nevertheless, these goals can be in conflict if human activity negatively affects wildlife. Hence, when considering habitat remnants as conservation refuges it is crucial to understand how human activities and land uses affect wildlife use of those and adjacent areas. We used tracking data (animal tracks and den or bed sites) on 10 animal species and information on human activity and environmental factors associated with anthropogenic disturbance in 12 habitat fragments across San Diego County, California, to examine the relationships among habitat fragment characteristics, human activity, and wildlife presence. There were no significant correlations of species presence and abundance with percent plant cover for all species or with different land‐use intensities for all species, except the opossum (Didelphis virginiana), which preferred areas with intensive development. Woodrats (Neotoma spp.) and cougars (Puma concolor) were associated significantly and positively and significantly and negatively, respectively, with the presence and prominence of utilities. Woodrats were also negatively associated with the presence of horses. Raccoons (Procyon lotor) and coyotes (Canis latrans) were associated significantly and negatively and significantly and positively, respectively, with plant bulk and permanence. Cougars and gray foxes (Urocyon cinereoargenteus) were negatively associated with the presence of roads. Roadrunners (Geococcyx californianus) were positively associated with litter. The only species that had no significant correlations with any of the environmental variables were black‐tailed jackrabbits (Lepus californicus) and mule deer (Odocoileus hemionus). Bobcat tracks were observed more often than gray foxes in the study area and bobcats correlated significantly only with water availability, contrasting with results from other studies. Our results appear to indicate that maintenance of habitat fragments in urban areas is of conservation benefit to some animal species, despite human activity and disturbance, as long as the fragments are large.     

Ants as a Measure of Effectiveness of Habitat Conservation Planning in Southern California

Abstract: In the United States multispecies habitat conservation plans were meant to be the solution to conflicts between economic development and protection of biological diversity. Although now widely applied, questions exist concerning the scientific credibility of the conservation planning process and effectiveness of the plans. We used ants to assess performance of one of the first regional conservation plans developed in the United States, the Orange County Central‐Coastal Natural Community Conservation Plan (NCCP), in meeting its broader conservation objectives of biodiversity and ecosystem‐level protection. We collected pitfall data on ants for over 3 years on 172 sites established across a network of conservation lands in coastal southern California. Although recovered native ant diversity for the study area was high, site‐occupancy models indicated the invasive and ecologically disruptive Argentine ant (Linepithema humile) was present at 29% of sites, and sites located within 200 m of urban and agricultural areas were more likely to have been invaded. Within invaded sites, native ants were largely displaced, and their median species richness declined by more than 60% compared with uninvaded sites. At the time of planning, 24% of the 15,133‐ha reserve system established by Orange County NCCP fell within 200 m of an urban or agricultural edge. With complete build out of lands surrounding the reserve, the proportion of the reserve system vulnerable to invasion will grow to 44%. Our data indicate that simply protecting designated areas from development is not enough. If habitat conservation plans are to fulfill their conservation promise of ecosystem‐level protection, a more‐integrated and systematic approach to the process of habitat conservation planning is needed.     

Use of Riparian Corridors and Vineyards by Mammalian Predators in Northern California

Abstract:  To address increasing fragmentation, conservation biologists have focused on protecting core habitat areas and maintaining connectivity among protected areas. Wildlife corridors, strips of relatively intact habitat designed to connect habitat fragments, may enhance connectivity, but little empirical evidence supports the idea that large mammals prefer to use corridors rather than the surrounding developed landscape. In Sonoma County, a premium wine-grape-growing region in California, we examined mammalian predator use of 21 riparian corridors classified as denuded, narrow, or wide according to the width of the remaining natural vegetation adjacent to the creek. We used unbaited, remotely triggered cameras to determine occurrence of predator species. We also monitored predator use of six vineyards, three close to core habitat and three far from core habitat, with unbaited cameras. Mammalian predator detection rates were 11-fold higher in riparian study areas than in vineyards. More native mammalian predator species were found in wide corridors than in narrow or denuded creek corridors. The number and activity level of native predators was higher in vineyards adjacent to core habitat than in vineyards farther away, where the number and activity level of non-native predators was higher. Maintaining wide and well-vegetated riparian corridors may be important in maintaining the connectivity of native predator populations to ensure their long-term survival.     

A Behaviorally Explicit Demographic Model Integrating Habitat Selection and Population Dynamics in California Sea Lions

Abstract: Although there has been a call for the integration of behavioral ecology and conservation biology, there are few tools currently available to achieve this integration. Explicitly including information about behavioral strategies in population viability analyses may enhance the ability of conservation biologists to understand and estimate patterns of extinction risk. Nevertheless, most behavioral‐based PVA approaches require detailed individual‐based data that are rarely available for imperiled species. We present a mechanistic approach that incorporates spatial and demographic consequences of behavioral strategies into population models used for conservation. We developed a stage‐structured matrix model that includes the costs and benefits of movement associated with 2 habitat‐selection strategies (philopatry and direct assessment). Using a life table for California sea lions (Zalophus californianus), we explored the sensitivity of model predictions to the inclusion of these behavioral parameters. Including behavioral information dramatically changed predicted population sizes, model dynamics, and the expected distribution of individuals among sites. Estimated population sizes projected in 100 years diverged up to 1 order of magnitude among scenarios that assumed different movement behavior. Scenarios also exhibited different model dynamics that ranged from stable equilibria to cycles or extinction. These results suggest that inclusion of behavioral data in viability models may improve estimates of extinction risk for imperiled species. Our approach provides a simple method for incorporating spatial and demographic consequences of behavioral strategies into population models and may be easily extended to other species and behaviors to understand the mechanisms of population dynamics for imperiled populations.     

Prospects for Development of an Index of Biotic Integrity for Evaluating Habitat Degradation in Coastal Systems

A multivariate index for assessment of habitat quality and its degradation, the Index of Biotic Integrity (IBI), has been developed for stream fish communities. the extension of the IBI concept to coastal waters is proposed by the development of an estuarine IBI based on macrobenthos and submerged aquatic vegetation. Eleven variables are proposed for inclusion in this index, although further consideration of the appropriateness of several variables is required. It is concluded that development of an IBI for coastal systems is feasible.     

Prospects for Development of an Index of Biotic Integrity for Evaluating Habitat Degradation in Coastal Systems

A multivariate index for assessment of habitat quality and its degradation, the Index of Biotic Integrity (IBI), has been developed for stream fish communities. the extension of the IBI concept to coastal waters is proposed by the development of an estuarine IBI based on macrobenthos and submerged aquatic vegetation. Eleven variables are proposed for inclusion in this index, although further consideration of the appropriateness of several variables is required. It is concluded that development of an IBI for coastal systems is feasible.     

Effects of Management of Domestic Dogs and Recreation on Carnivores in Protected Areas in Northern California

Abstract: In developed countries dogs (Canis lupus familiaris) are permitted to accompany human visitors to many protected areas (e.g., >96% of protected lands in California, U.S.A.), and protected‐area management often focuses on regulating dogs due to concerns about predation, competition, or transmission of disease and conflicts with human visitors. In 2004 and 2005, we investigated whether carnivore species richness and abundance were associated with management of domestic dogs and recreational visitation in protected areas in northern California. We surveyed for mammalian carnivores and human visitors in 21 recreation areas in which dogs were allowed offleash or onleash or were excluded, and we compared our observations in the recreation areas with observations in seven reference sites that were not open to the public. Carnivore abundance and species richness did not differ among the three types of recreation areas, but native carnivore species richness was 1.7 times greater (p < 0.01) and the relative abundances of native coyotes (Canis latrans) and bobcats (Lynx rufus) were over four times greater (p < 0.01) in the reference sites. Abundances of bobcats and all carnivores declined as the number of visitors increased. The policy on domestic dogs did not appear to affect species richness and abundance of mammalian carnivores. But the number of dogs we observed was strongly associated with human visitation (R²= 0.54), so the key factors associated with recreational effects on carnivores appear to be the presence and number of human visitors to protected areas.     

Habitat utilization and alteration by the invasive burrowing isopod, Sphaeroma quoyanum, in California salt marshes

In recent years the pace of exotic species introduction and invasion has accelerated, particularly in estuaries and wetlands. Species invasions may affect coastal ecosystems in many ways. Alteration of sedimentary environments, through structure formation and burrowing, has particularly dramatic effects on coastal habitats. This study examines modification of channel bank and marsh edge habitat by the burrowing Australasian isopod Sphaeroma quoyanum Milne Edwards, in created and natural salt marshes of San Diego Bay and San Francisco Bay. Abundance and distribution patterns of this isopod species, its relationships with habitat characteristics, and its effects on sediment properties and bank erosion were examined seasonally, and in several marsh microhabitats. Mean isopod densities were 1541 and 2936 individuals per 0.25 m² in San Francisco Bay, and 361 and 1153 individuals per 0.25 m² in San Diego Bay study sites during December and July 1998, respectively. This isopod forms dense, anastomosing burrow networks. S. quoyanum densities did not differ as a function of location within creeks or location in natural versus created marshes. Burrows, which are on average 6 mm wide and 2 cm long, were associated with firm sediments containing high detrital biomass. Although erosion is a natural process along salt marsh banks, enclosure experiments demonstrated that isopod activities can enhance sediment loss from banks. In areas infested with S. quoyanum, losses may exceed 100 cm of marsh edge per year. The effects of habitat alteration by this invading species are likely to increase in severity in the coastal zone as these ecosystems become degraded. Received: 30 March 2000 / Accepted: 21 September 2000