曲面效应法优化辅酶Q10发酵条件

以根癌土壤杆菌(Agrobacterium tum efaciens)1.1416的突变株AGR 0610为出发菌株,采用P lackett-Burm an设计法(P lackett-Burm an design,P-B)对影响AGR 0610发酵产辅酶Q10的相关因素进行了研究,选取到4种有显著效应的因素:糖蜜、大豆蛋白胨、玉米浆和蛋氨酸.再采用响应曲面法(response surface m ethodology,RSM)对这4种因素的最佳水平范围进一步探讨,得到二次回归方程,优化了培养基组成.当这4种因素分别取值为1.02%、0.49%、0.29%和0.34%时,辅酶Q10产量有最大预测值38.88 mg/L,并被实验所证实.图6表4参8     

利用广谱性和特异性组合诱变技术选育辅酶Q10高产菌

为提高辅酶Q10产量，采用了对细胞进行全面的非特异性诱变和针对特定途径的特异性诱变相结合的育种策略，以放射型根瘤菌(Rhizobium radiobacter)WSH2601为出发菌株，选择UV射线和亚硝基胍作为诱变剂，在筛选获得放线菌素D抗性突变株的基础上，通过进一步的诱变处理，分别获得了放线菌素D和L-乙基硫氨酸双抗性突变株、放线菌素D和维生素K双抗性突变株，以及抗放线菌素D和X-gal利用能力提高的突变株．与出发菌株相比，突变株辅酶Q10的产量提高幅度达25％-37％，其中一株放线菌素D和L-乙基硫氨酸双抗性突变株WSH-E25，胞内辅酶Q10含量和辅酶Q10总产量分别达到2．86mg g DCW^-1和40．0mg L^-1，均比出发菌株提高了37％，且遗传稳定性良好，图6表2参8     

有机磷酸酯对青海弧菌Q67毒性的构效关系

以淡水发光菌Q67为受试生物,结合微孔板高通量检测技术,测定了15种常见有机磷酸酯的毒性,同时选用极化率(P)、分子表面积(TSA)、正辛醇/水分配系数(logD)和芳香环个数(N Ar)等有机磷酸酯的7种分子结构描述符,采用偏最小二乘回归分析方法建立了15种有机磷酸酯对Q67发光菌毒性的定量结构活性相关(quantitative structure-activity relationships,QSAR)模型。结果表明,15种有机磷酸酯的EC50在1.13×10-5~3.27×10-3mol·L-1之间。在7个结构变量中,4个变量发挥主要作用。其中分子极化率(P)在有机磷酸酯类污染物对发光菌的急性毒性中发挥重要作用,推断发光菌中的荧光素酶及其辅酶是其主要作用位点;脂溶性(logD)越大的化合物越较易穿过细胞膜,进而使Q67发光菌的毒性效应增大;芳香环数(N Ar)越多,有机磷酸酯对发光菌的急性毒性越大;对分子结构类似的有机磷酸酯,其Q67发光菌的毒性效应随TSA值的增大而增强。利用所构建的构效关系模型,其稳定性(Q2CUM=0.544)和预测能力(Q2EXT=0.808,RMSE=0.195)较好,可用来预测有机磷酸酯对Q67发光菌的急性效应。     

维生素C二步发酵中L-山梨糖脱氢酶的性质及作用

从氧化葡萄糖酸杆菌细胞质中分离纯化出L 山梨糖脱氢酶 (SDH) ,其分子量为 46× 10 3 ,表观分子量为 190× 10 3 ;在测试范围内 ,最适pH是 7.4,温度为 5 5℃ ,最稳定的 pH是 7.0 ,温度为 30℃以下 ;FeCl3 促进酶活 ,CoCl2 抑制酶活 .该酶活力与发酵产物 2 酮基 L 古龙酸的合成呈正相关 ;伴生菌促进产酸菌生长和代谢 ,并使该酶比活力增加 ,从而提高发酵系统中该酶的总活力 .图 11表 5参 9     

响应面法优化漆酶基因lac1338表达漆酶的发酵条件

为提高Escherichia coli BL21(DE3)中漆酶基因lac1338的表达水平,采用响应面法对其发酵条件进行优化.首先用Plackett-Burman法筛选出3个影响较大的重要因素,分别为温度(Q1)、诱导时间(Q3)以及诱导前菌体浓度OD600 nm(Q4).继而结合响应面分析,建立以漆酶酶活为响应值的二次回归方程模型,即Y=75.33+3.30A+9.35B+5.35C-1.69AB+0.80AC+11.50BC-25.97A~2+1.83B~2-4.66C~2,从中获得最优的发酵条件:诱导温度为31℃,诱导时间为20 h,诱导前的菌体浓度OD600 nm值为1.8.采用该发酵条件,供试菌株的漆酶比酶活达到22.8 U/mg,较优化前漆酶的表达量(10.7 U/mg)提高了2.13倍,其试验值与预测值基本相符.说明预测模型可靠性高,可应用于漆酶发酵条件的优化.     

拟茎点霉属Phomopsis sp.S4菌株发酵产物对稻瘟病菌细胞膜的抑制作用

内生真菌拟茎点霉属真菌Phomosis sp.S4菌株发酵次生代谢产物对多种植物病原菌具有良好的抑菌效果,在防治农作物病害上具有应用前景.为探究S4菌株发酵产物对植物病原真菌的抑制机理,以稻瘟病菌为研究材料,通过普通抑菌实验、扫描电镜、荧光定量PCR以及生理实验,检测S4菌株发酵液提取物对稻瘟病菌细胞膜的作用情况.扫描电镜实验显示经S4菌株提取物处理的稻瘟病菌菌丝严重变形,菌丝表面出现大量褶皱,表明提取物对稻瘟病菌细胞膜和细胞壁的完整性造成破坏.荧光定量PCR检测到细胞膜中重要组成成分麦角甾醇合成途径中相关基因的变化情况,麦角甾醇合成途径中ERG1、ERG11、ERG6基因分别下调了2.0、1.40、2.7倍,ERG7基因上调了1.38倍.随后的生理实验也表明经过S4提取物处理的稻瘟病菌确实存在细胞内容物泄露的情况.本研究表明S4提取物通过抑制麦角甾醇合成而破坏细胞膜的完整性导致细胞内容物泄露,从而达到抑制真菌生长效果.     

乙酰辅酶A合成酶的酶学性质及其在甲羟戊酸合成中的应用

乙酰辅酶A合成酶(ACS)在微生物体内可直接将乙酸转化为乙酰辅酶A,乙酰辅酶A再进入微生物的碳代谢循环过程.为提高乙酸的利用效率,筛选催化活性较高的乙酰辅酶A合成酶,从大肠杆菌(Escherichia coli K-12)和巴氏醋酸杆菌(Acetobacter pasteurianus ATCC 33445)中扩增得到3个不同的乙酰辅酶A合成酶基因,将这3个基因分别连接到p ET-28a(+)载体上,Western Blot分析表明,3个基因均在E.coli BL21(DE3)中成功表达.对3个不同来源的乙酰辅酶A合成酶的酶活性进行比较,发现来自于巴氏醋酸杆菌的乙酰辅酶A合成酶(ACS2)具有较高的催化活力;其最适温度37℃,最适pH在7-8之间;在最适反应条件下,K_m为1.16 mmol/L,最大反应速度(V_(max))为20.45 mmol L~(-1) min~(-1).将ACS2应用到以乙酸为底物生物合成甲羟戊酸过程中,当过表达ACS2时,单批补料发酵条件下,甲羟戊酸产量达到6.59g/L.本研究筛选到1种催化活性较高的乙酰辅酶A合成酶,显著提高了甲羟戊酸的生物合成,可为乙酰辅酶A合成酶的进一步研究和应用提供理论支持.(图8表1参18)     

QSAR模型内部和外部验证方法综述

验证定量-结构活性相关(QSAR)模型,是保证模型对未知样本的生物活性具有可靠预测能力的重要前提.然而,目前部分QSAR论文没有对模型进行有效验证.因此,本文详细综述QSAR模型的内部验证方法和外部验证方法.内部验证方法包括留一法(leave-one-out,LOO)交叉验证,留多法(leave-many-out,LMO)或留N法(leave-N-out,LNO)交叉验证,y随机化验证和自举法.评价模型外部预测能力的统计量包括Q2F1、Q2F2、Q2F3、一致性相关系数(concordance correlation coefficient,CCC)、r珋2m和Golbraikh-Tropsha方法.此外,从文献中总结出可接受QSAR模型对应的统计量参考数值,从而为QSAR建模者提供指导与帮助.     

海洋细菌B3B产河豚毒素特性的鉴定及其发酵培养基优化

从我国渤海红鳍东方豚(Fugu rubripes)的卵巢中分离到了一株海洋细菌B3B,对其发酵产物进行了分离和精制,通过小鼠试验、高效液相色谱试验及质谱分析,认定其发酵产物中含有河豚毒素(tetrodotoxin,TTX).采用均匀设计回归分析及优化系统对其培养基组分做了优化,获得了较理想的发酵培养基,使TTX的产量提高了128.7%.图2表2参21     

液相色谱-串联质谱法测定谷物类食品中T-2毒素

本文建立了一种对谷物类食品中T-2毒素的检测方法.通过条件探索,采用乙腈-水(84∶16)作为提取溶剂,振荡超声结合的提取方式,多功能净化柱进行净化,高效液相色谱-质谱联用仪(LC-MS/MS)进行分析测试,内标法定量.通过检出限、回收率及精密度等方法学验证实验表明,该方法检出限为5μg·kg-1,定量限为10μg·kg-1,三水平加标回收率在100.4%—101.0%之间,精密度在1.16%—3.33%之间.     

复合高效微生物处理高含盐石油开采废水

石油开采废水中高含盐量对微生物处理有强抑制作用。有针对性地筛选驯化了耐盐复合高效处理菌群对大港油田石油开采废水进行有机物降解，在废水的氯离子含量为20000～36000mg／L，COD浓度l600～4000mg／L范围内，高含盐量对耐盐复合高效微生物无明显抑制作用，结合物化处理方法COD去除率稳定在90％左右，处理后水达到二级排放标准。     

桑园土壤微生物群落功能多样性对PAHs污染的响应

为了探明桑园土壤微生物群落功能多样性与多环芳烃(PAHs)污染的关系,采用Biolog检测法研究某路域桑园土壤微生物功能多样性对PAHs污染的响应。结果表明,不同区域PAHs污染程度由大到小依次为区域2(位于区域1和3之间)、3(离公路最远)和1(离公路最近);Biolog分析发现不同区域土壤微生物对碳源利用的平均颜色变化率(AWCD)由大到小依次为区域2、3和1;区域2的Shannon指数和Gini指数均显著高于区域1和3,而区域1的Shannon均匀度显著低于区域2和3,区域2土壤微生物活性最强且群落结构最丰富,其后依次为区域3和1。主成分分析结果显示,3个区域微生物群落的生理功能差异明显,主要表现在对糖类和氨基酸类物质的代谢上。冗余分析表明,区域2土壤微生物与PAHs含量关系最密切,说明较高的PAHs含量更能激发桑园土壤微生物的生理活性,微生物群落代谢功能因PAHs污染而有所提高。     

大同盆地高砷地下水中可培养耐砷微生物的群落结构

大同盆地是典型的高砷地下水分布区。利用从地方性砷中毒严重病区山阴县采集的高砷地下水样品,用稀释培养法实验研究了外加砷源对地下水中微生物数量的影响;同时基于生物学可培养法和16SrDNA序列比对法,选取代表性高砷水样,研究了耐砷菌的种群特征。结果表明,外加砷源对地下水中微生物数量影响显著,高浓度砷会抑制大部分微生物生长,使微生物数量减少;低浓度砷对微生物生长具有一定促进作用。通过多次分离、纯化从3个不同砷含量地下水样中分离到多株砷抗性菌,经鉴定属于主要为Bacillus、Pseudomonas、Paenibacillus、Aeromonas、Enterobacter5个属。从RDP(RibosomalDatabaseProject)分析显示3个水样可培养微生物组成不同,都有生存能力强能够耐低浓度NaAsO2的Bacillales,优势耐砷菌是γ-proteobacteria,其中Enterbacter具有耐高浓度NaAsO2的能力。     

管网生物膜菌株胞外聚合物的提取方法比较

以饮用水管网生物膜样品中一株强成膜能力的菌株Pleomorphomonas oryzae作为研究对象,考察了8种方法(高速离心法、超声法、加热法、EDTA法、H2SO4法、NaOH法、SDS法、甲醛法)对菌株胞外聚合物(EPS)的提取效果,并结合三维荧光光谱(EEM)和傅立叶红外光谱(FTIR)对提取的EPS进行成分分析.结果表明,EDTA法和H2SO4法既能提高EPS的提取效率,提取量分别为64.77 mg.g-1SS和74.43 mg.g-1SS,是离心方法提取量的1.62倍和1.86倍,又不会在提取过程中对菌株细胞造成破坏,是较为理想的EPS提取方法.EEM分析进一步证实,NaOH法对菌株细胞破坏严重,造成EPS成分变化较大.FTIR分析则说明,化学提取方法相较于物理提取方法会引入杂质对组分测定造成干扰.     

污水处理厂空气介质抗生素抗性基因的分布

考察了污水处理厂空气介质中典型的抗性基因(antibiotic resistance genes,ARGs)污染水平和浓度分布,并通过16S r RNA高通量技术对样品进行亲缘性及溯源研究。结果表明,在污水厂空气样品中8种抗生素抗性基因的检出率均超过50%,其中tet C、sul1、sul2和erm B检出率为100%。在曝气池和污泥脱水车间空气样品中8种抗性基因检出率均为100%。对其中的sul1、sul2、tet G和tet X共4种ARGs的定量分析结果表明,以上4种基因的相对浓度范围在102~105copies·ng~(-1)DNA之间,与邻近居民区空气样品抗性基因浓度处于同一水平;空气样品16S r RNA高通量测序聚类分析结果显示,居民区空气与污水厂园区内空气有较高的种群相似度,污水厂处理单元对其邻近区域的空气介质微生物组成影响较大。     

Isolation of cellulolytic microbes from the intestinal tract of the pinfish,Lagodon rhomboides: size-related changes in diet and microbial abundance

Pinfish, Lagodon rhomboides (Linneaus), undergo a gradual ontogenetic dietary shift during their first year of life, marked by an increase in the consumption of plant material. To determine if this shift in diet was associated with a change in the microbial flora of the intestinal tract that may assist in degradation of plant material, stomach contents were analyzed and microbes in the intestinal tract were isolated from fish ranging from 20 to 139 mm standard length. These fish were collected from Core Sound, North Carolina, USA between March and September 1991. Plant material increased from 16% of dry weight of stomach contents in pinfish under 40 mm standard length (SL) to 65% in pinfish above 120 mm SL, confirming previous observations of a diet-related ontogenetic change in L. rhomboides. Comparison of the total cultivatable facultative and anaerobic microbial flora isolated from the intestinal tract contents of pinfish ranging in size from 26 to 139 mm SL showed a 10-fold increase between fish <40 and fish >40 mm SL, with maximum population densities of approximately 2x10⁷ colony forming units (CFU) g^-1 of intestine including contents. The percentage of microbial isolates examined capable of hydrolyzing carboxymethylcellulose (CMC) increased from 12% in fish <40 mm SL to 13 to 50% in fish >40 mm SL, although there was no strict increase with increasing fish size classes. Although the percentage of CMC-hydrolytic microbial isolates varied with respect to fish SL, the percentage of skim-milk hydrolytic (proteolytic) isolates remained relatively constant (4% of total isolates) irrespective of fish SL and dietary composition. Results presented in this study document the first isolation of carboxymethylcellulase producing microbes from the intestinal tract of any fish and demonstrate that the ontogenetic dietary shift in L. rhomboides is paralleled by qualitative and quantitative changes in the intestinal microbial community. The use of strict anaerobic sampling methods in the preparation of intestinal contents from wild-captured fresh specimens was essential in obtaining these isolates.     

纳米银与银离子对土壤微生物及酶活性的影响

为研究纳米银和银离子对土壤微生物的影响,采用土壤培养方式,对不同剂量纳米银(10、50、100 mg·kg~(-1))和银离子(1、5、10 mg·kg~(-1))暴露下黄褐土、砖红壤中可培养微生物数量及土壤酶活性(脲酶、荧光素二乙酸酯水解酶、蔗糖酶、过氧化氢酶)进行研究,并采用纯培养方法对纳米银和银离子暴露下的大肠杆菌(Escherichia coli)、金黄色葡萄球菌(Staphylococcus aureus)凋亡情况进行检测,对纳米银释放的银离子毒性进行评估。结果表明,随着纳米银剂量的增加,土壤可培养微生物数量显著减少,脲酶和过氧化氢酶活性降低,蔗糖酶、荧光素二乙酸酯水解酶(FDA酶)活性没有显著变化;银离子处理中微生物数量明显减少,但土壤酶活性被激活。10 mg·L~(-1)纳米银暴露1 h后大肠杆菌、金黄色葡萄球菌凋亡率、死亡率增高;随着培养时间的延长,纳米银缓慢释放银离子,并促进大肠杆菌的凋亡。综上分析,纳米银能够抑制土壤可培养微生物生长和酶活性,其中脲酶、过氧化氢酶对纳米银较为敏感,蔗糖酶、FDA酶受纳米银的影响较小;纳米银的毒性一方面是其本身的特异抗菌性,也有部分来自缓慢释放的银离子。     

Mikrobiologische Volatilisierung von anorganischem Selen aus Deponiesickerwässern bei umweltrelevanten Konzentrationen

Background, aim, and scope Determination of the rates of microbial alkylation are of interest with respect to natural attenuation of harmful selenium concentrations or selenium charges in contaminated ecosystems. Materials and methods Landfill gas and the headspace of microbial microcosm incubation vessels were sampled in Tedlar^® bags. On-line hyphenation of an efficient enrichment method (cryotrapping-cryofocusing), a gaschromatographic separation technique, and the sensitive ICP-MS detection system was used for speciation of volatile organoselenium compounds. A detection limit at the ultra trace level (pg Se) was achieved with this CT-CF-GC-ICP-MS technique. Results Incubation of landfill leachate with Alternata alternata as an active methylating organism showed a production of volatile selenium compounds (DMSe, DMDSe, EMDSe, DEDSe) over the whole range of applied inorganic selenium concentrations (10?µg?L^–1 to 10?mg?L^–1), with volatilization rates of up to 10?mg m^–3?d^–1. For selenium concentrations of 1?mg?L^–1 in the nutrient broth, up to 7?% of the inorganic selenium was volatilized after one week. The same volatile selenium compounds were observed in landfill gas. Discussion The amount of volatilized selenium was comparable to that found in other studies with microbial pure cultures as well as isolates from waters or soils, but at much lower initial concentrations used in the incubations. Conclusions The alkylation of selenium in the enriched mixed culture from landfill leachate at environmentally relevant concentrations indicates that the organoselenium compounds of same species composition and distribution determined in landfill gas are produced by microorganisms. Recommendations and perspectives The microbial alkylation of toxic inorganic selenium species to less toxic or non-toxic, volatile compounds is an efficient method for bioremediation of contaminated sites even at relatively low Se concentrations.     

Air pollution below WHO levels decreases by 40 % the links of terrestrial microbial networks

Air pollution has a deleterious impact on public health and the environment. There is few knowledge on the effect of air pollution on terrestrial microbial communities, despite the major role of microbes in ecosystems. Here, we designed an in situ trial ecosystem to assess the impact of moderate atmospheric pollution, below World Health Organization (WHO) thresholds, on an indigenous microbial communities, including bacteria, fungi, ciliates, algae, cyanobacteria, testate amoebae, rotifers and nematodes, extracted from terrestrial bryophytes. These micro-ecosystems were placed at a rural, an urban and an industrial site in France and were thus exposed to various levels of nitrogen dioxide (NO₂), from 6.6–67.9 μg·m^?3, and particulate matter, from 0.7–7.9 μg·m^?3. Microbial analysis was performed by microscopy. We determined atmospheric temperature, relative humidity and particulate matter with diameter lower than 10 µm (PM₁₀), Cu, Cr, Fe, Ni, Pb, Zn in PM₁₀, and (NO₂). Results show a significant impact of chronic moderate exposure to NO₂ and copper Cu-associated particulate matter on the global microbial network complexity. This is evidenced by a loss of about 40 % of microbial co-occurrence links during incubation. Most lost microbial links are ecologically positive links. Moreover, most changes in community co-occurrence networks are related to testate amoebae, a major top predator of microbes. Overall, our findings demonstrate that air pollution can have strong deleterious effects on microbial interactions, even at levels below WHO thresholds.     

Distribution de certaines bactéries hétérotrophes aérobies dans les sédiments profonds de Méditerranée Orientale

Ninety five sediment samples were extracted from 16 cores collected at depths from 283 to 4,350 m in the Eastern Mediterranean Sea. Generally, the microbial population of superficial layers is lower than 10⁵ bacteria/g sediment. At depths below 1,000 m this population is lower than 10⁴. Bacterial counts at different levels of the sediment show that the microbial population is only important in the superficial layer. Below the surface, bacterial counts are generally between 10² to 10³ cells/ml. Some levels appear to be sterile; none of the 12 culture media gave rise to development with the sediment samples. Studies of some physiological groups of bacteria show scarcity of chitinoclastic and agarolytic bacteria and absence of cellulolytic and sulphate reducers. On the other hand, amylolytic, gelatinolytic, lypolytic and nitrate-reducing bacteria are widely distributed among the microbial population of marine sediments. This population of deep sediments includes a few auxotrophic bacteria.