The microbial community in a green turtle nesting beach in the Mediterranean: application of the Biolog EcoPlate approach for beach pollution

Environmental Science and Pollution Research - This study aims to characterize the microbial community and its relationship with heavy metal pollution in the beaches of Sugözü, an...     

Phytoremediation of petroleum hydrocarbons in tropical coastal soils II. microbial response to plant roots and contaminant

Goal, Scope and Background.  The goal of this study was to understand the interaction between plants and microorganisms during petroleum-hydrocarbon bioremediation in Pacific Islands coastal soils. Total bacteria and hydrocarbon-degrading microorganisms population dynamics were examined in the rhizospheres of tropical trees and shrubs, which were evaluated for their phytoremediation potential in a greenhouse experiment. The respective and combined effects of plant roots and diesel contaminant on the microbial populations were determined in relation to diesel fuel depletion. An increase in the size of the hydrocarbon-degrading populations of microbes, elicited by rhizodeposition, is generally regarded as conducive to an enhanced degradation of petroleum hydrocarbon polutants in veaetated soil. Conclusion  The results suggest the quality of the rhizodeposition is plant-dependent and governs the type of diesel-degrader populations that will be enhanced by a given plant. Recommendations and Outlook  In the proposed phytoremediation-benefit model plant roots maintain high levels of hydrocarbon de-graders in uncontaminated soil. When the root enters a contaminated zone of soil, those hydrocarbon degraders that prefer the contaminant would switch to the contaminant as a carbon source, effectively removing the hydrocarbons. If the root exudates and the contaminant are equally attractive to the hydrocarbon degraders, the contaminant degradation would be less effective.     

Phytoremediation of petroleum hydrocarbons in tropical coastal soils II. microbial response to plant roots and contaminant

GOAL, SCOPE AND BACKGROUND: The goal of this study was to understand the interaction between plants and microorganisms during petroleum-hydrocarbon bioremediation in Pacific Islands coastal soils. Total bacteria and hydrocarbon-degrading microorganisms population dyanamics were examined in the rhizospheres of tropical trees and shrubs, which were evaluated for their phytoremediation potential in a greenhouse experiment. The respective and combined effects of plant roots and diesel contaminant on the microbial populations were determined in relation to diesel fuel depletion. An increase in the grading populations size of the hydrocarbon-degrading populations of microbes, elicited by rhizodeposition, is generally regarded as conducive to an enhanced degradation of petroleum hydrocarbon pollutants in vegetated soil. METHODS: The soil was a coastal sandy loam (pH 7.8) which was artificially contaminated with 10 g of No. 2 diesel fuel/kg soil or left uncontaminated. The pots were irrigated with fertilizer and 1% NaCl. The enumerations were carried out in the contaminated and uncontaminated rhizospheres of three trees, kiawe (Prosopis pallida), milo (Thespesia populnea), and kou (Cordia subcordata) and three shrubs, beach naupaka (Scaevola sericea), false sandalwood (Myoporum sandwicense), and oleander (Nerium oleander). Unplanted control soils were included in the experiment. Total bacteria and phenanthrene-degrading bacteria were enumerated on plates. Diesel- and pristane-degrading microorganisms were enumerated by the most-probable-number technique in tissue-culture plates. RESULTS AND DISCUSSION: All four types of microorganisms responded to the rhizosphere of the 6 plants in uncontaminated soil and to the diesel contaminant in unplanted soil. In contaminated rhizospheres, no effect of the plant on the hydrocarbon-degrader numbers was visible. Total bacteria responded more to the plant roots than to the contaminant. The phenanthrene-degrading bacteria and pristane-degrading microorganisms were more influenced by the contaminant than by the plants. The diesel-degrading microorganisms were equally stimulated by the plants and the contaminant. The numbers of hydrocarbon degraders were similar in the contaminated rhizospheres of the three effective plants (kiawe, kou, and milo) and in those of the three ineffective shrubs. CONCLUSION: The results suggest the quality of the rhizodeposition is plant-dependent and governs the type of diesel-degrader populations that will be enhanced by a given plant. RECOMMENDATIONS AND OUTLOOK: In the proposed phytoremediation-benefit model plant roots maintain high levels of hydrocaron degraders in uncontaminated soil. When the root enters a contaminated zone of soil, those hydrocarbon degraders that prefer the contaminant would switch to the contaminant as a carbon source, effectively removing the hydrocarbons. If the root exudates and the contaminant are equally attractive to the hydrocarbon degraders, the contaminant degradaton would be less effective.     

生物可渗透性反应墙修复石油烃污染地下水的效果及微生物多样性研究

采用可渗透性反应墙(PRB)协同微生物作用对石油烃污染地下水进行室内模拟修复.研究结果表明,生物PRB对石油烃污染地下水具有较好的处理效果.反应器运行200 d后,生物PRB前端介质总石油烃(TPH)含量高,15个取样点的TPH质量浓度为0.74～5.42 mg/L,后端介质TPH含量较低且分布较均匀,10个取样点中TPH均低于0.29 mg/L,生物PRB出水中未检出TPH.采用聚合酶链式反应(PCR)-变性梯度凝胶电泳(DGGE)技术对生物PRB内的微生物群落结构进行分析,结果显示,生物PRB中微生物群落结构的相似性随着横向距离的增大而降低,其中B2与B5取样点微生物相似度最高,达83.1％.在生物PRB前端TPH浓度高的部位,微生物群落较为稳定,多样性较低,而后端TPH浓度低的部位,微生物群落不稳定,多样性较高.     

Phylogenetic analysis of the microbial community in hypersaline petroleum produced water from the Campos Basin

In this work the archaea and eubacteria community of a hypersaline produced water from the Campos Basin that had been transported and discharged to an onshore storage facility was evaluated by 16S recombinant RNA (rRNA) gene sequence analysis. The produced water had a hypersaline salt content of 10 (w/v), had a carbon oxygen demand (COD) of 4,300 mg/l and contains phenol and other aromatic compounds. The high salt and COD content and the presence of toxic phenolic compounds present a problem for conventional discharge to open seawater. In previous studies, we demonstrated that the COD and phenolic content could be largely removed under aerobic conditions, without dilution, by either addition of phenol degrading Haloarchaea or the addition of nutrients alone. In this study our goal was to characterize the microbial community to gain further insight into the persistence of reservoir community members in the produced water and the potential for bioremediation of COD and toxic contaminants. Members of the archaea community were consistent with previously identified communities from mesothermic reservoirs. All identified archaea were located within the phylum Euryarchaeota, with 98 % being identified as methanogens while 2 % could not be affiliated with any known genus. Of the identified archaea, 37 % were identified as members of the strictly carbon-dioxide-reducing genus Methanoplanus and 59 % as members of the acetoclastic genus Methanosaeta. No Haloarchaea were detected, consistent with the need to add these organisms for COD and aromatic removal. Marinobacter and Halomonas dominated the eubacterial community. The presence of these genera is consistent with the ability to stimulate COD and aromatic removal with nutrient addition. In addition, anaerobic members of the phyla Thermotogae, Firmicutes, and unclassified eubacteria were identified and may represent reservoir organisms associated with the conversion hydrocarbons to methane.     

Monitoring microbial community in a subsurface soil contaminated with hydrocarbons by quinone profile

A natural attenuation experiment was carried out using a lysimeter for 308 days after contaminating the subsoil with hydrocarbons (HCs) and the changes in the structures of microbial community in the hydrocarbon (HC) contaminated subsoil were monitored by quinone profile analysis. The residues of HCs remained for 217 days in the subsoil after the contamination. The amount of total quinones (TQ), an indicator of microbial biomass, significantly increased in the HC contaminated subsoil for 217 days, comparing with that of the background subsoil or the subsoil before the addition of HCs. The major quinone species and the quinone composition, indicators of community structure, were significantly different between the HC contaminated soil and the background soil for 217 days. The major increased quinine species in the HC contaminated soil were menaquinone-8(H4), menaquinone-9(H2) and ubiquinone-9, indicating the propagation of Gram-positive bacteria with high guanine and cytosine content and gamma-subclass of Proteobacteria and fungi. There was no significant difference in the diversity of the quinone species (DQ), an indicator of taxonomic diversity of microbial community, except for the decrease in DQ in the shallow subsoil after 35 days when a high concentration of HCs was detected. After 308 days when the HCs in the subsoil disappeared, TQ returned to the level of the background soil, and no significant difference in quinone composition were observed between the HC contaminated soil and the background soil. The results suggested that respiratory quinones are effective biomarkers for characterizing the temporal changes of microbial community in the HC contaminated subsoil.     

Effect of biochar on the fate of volatile petroleum hydrocarbons in an aerobic sandy soil

Biochar addition to soil is currently being investigated as a novel technology to remediate polluted sites. A critical consideration is the impact of biochar on the intrinsic microbial pollutant degradation, in particular at sites polluted with a mixture of readily biodegradable and more persistent organic pollutants. We therefore studied the impact of biochar (2% on dry weight basis) on the fate of volatile petroleum hydrocarbons in an aerobic sandy soil with batch and column studies. The soil-water partitioning coefficient, K(d), was enhanced in the biochar-amended soil up to a factor 36, and petroleum hydrocarbon vapor migration was retarded accordingly. Despite increased sorption, in particular of monoaromatic hydrocarbons, the overall microbial respiration was comparable in the biochar-amended and unamended soil. This was due to more rapid biodegradation of linear, cyclic and branched alkanes in the biochar amended soil. We concluded that the total petroleum hydrocarbon degradation rate was controlled by a factor other than substrate availability and the reduced availability of monoaromatic hydrocarbons in the biochar amended soil led to greater biodegradation of the other petroleum compounds.     

Application of in situ biosparging to remediate a petroleum-hydrocarbon spill site: field and microbial evaluation

In this study, a full-scale biosparging investigation was conducted at a petroleum-hydrocarbon spill site. Field results reveal that natural attenuation was the main cause of the decrease in major contaminants [benzene, toluene, ethylbenzene, and xylenes (BTEX)] concentrations in groundwater before the operation of biosparging system. Evidence of the occurrence of natural attenuation within the BTEX plume includes: (1) decrease of DO, nitrate, sulfate, and redox potential, (2) production of dissolved ferrous iron, sulfide, methane, and CO(2), (3) decreased BTEX concentrations along the transport path, (4) increased microbial populations, and (5) limited spreading of the BTEX plume. Field results also reveal that the operation of biosparging caused the shifting of anaerobic conditions inside the plume to aerobic conditions. This variation can be confirmed by the following field observations inside the plume due to the biosparging process: (1) increase in DO, redox potential, nitrate, and sulfate, (2) decrease dissolved ferrous iron, sulfide, and methane, (3) increased total cultivable heterotrophs, and (4) decreased total cultivable anaerobes as well as methanogens. Results of polymerase chain reaction, denaturing gradient gel electrophoresis, and nucleotide sequence analysis reveal that three BTEX biodegraders (Candidauts magnetobacterium, Flavobacteriales bacterium, and Bacteroidetes bacterium) might exist at this site. Results show that more than 70% of BTEX has been removed through the biosparging system within a 10-month remedial period at an averaged groundwater temperature of 18 degrees C. This indicates that biosparging is a promising technology to remediate BTEX contaminated groundwater.     

Alteration of sediment organic matter in sediment microbial fuel cells

The alteration of physico-chemical properties of sediment organic matter (SOM) incubated under current-harvesting conditions as well as no-current producing conditions over 120 days using sediment microbial fuel cell systems was examined. The SOM was microbially oxidized under anaerobic conditions with an electrode serving as a terminal electron acceptor. It was found that SOM around the electrochemically-active electrodes became more humified, aromatic, and polydispersed, and had a higher average molecular weight, along with its partial degradation and electricity generation compared to that for the original sediment. These changes in SOM properties were analogous to those commonly observed in the early stages of the SOM diagenetic process (i.e. humification). Such a humification-like process was evidently more stimulated when electrical current was produced than no-current condition. These new findings associated with microbially-catalyzed electricity generation may present a potential for the energy-efficient remediation, monitoring, and/or management of the geo-environment.     

采油废水中多环芳烃的生态风险评价

先利用C-18固相萃取小柱富集大港油田港东联合处理站污水处理站的采油废水中16种多环芳烃(PAHs,即萘、苊烯、苊、芴、菲、蒽、荧蒽、芘、、苯并[a]蒽、苯并[b]荧蒽、苯并[k]荧蒽、苯并[a]芘、茚并[1,2,3-cd]芘、二苯并[a,h]蒽和苯并[g,h,i]苝),再用气相色谱/质谱(GC/MS)分析测定其浓度,以评价PAHs的去除率和生态风险。结果表明:(1)采油废水经处理后,COD、石油类去除率分别达到82.27%、91.06%;外排水COD、石油类达到《污水综合排放标准》(GB 8978—1996)一级标准要求,优于中国采油废水处理的一般水平。(2)采油废水主要以2、3环的PAHs为主,约占总量的93%以上。(3)苯并[a]芘超过《地表水环境质量标准》(GB 3838—2002)中限值。(4)处理前的采油废水中蒽、菲和苯并[a]芘具有一定的生态风险;处理后的外排水中萘、蒽、菲、荧蒽、苯并[a]芘的暴露浓度(PEC)/预测无效应浓度(PNEC)均小于1,目前尚未对环境造成威胁。但是8种PAHs(苊烯和苯并类PAHs除外)总和表现出较大的毒性,需要引起重视。     

石油烃对海洋浮游植物生长的影响研究进展

石油烃是主要的海洋污染物之一,而浮游植物是石油烃进人海洋食物链的起点.从种群生长和群落结构、代谢活动等几个方面,综述了石油烃对海洋浮游植物的生物学及生态学效应研究进展,并讨论了影响石油烃毒性效应的主要影响因素,最后对相关研究的未来发展方向进行了展望.     

多环芳烃在低氧沉积物环境中的分布状况

低氧环境普遍存在于底层水体以及表层沉积物中,随着中国水体有机污染加剧,低氧现象将越来越明显.有研究表明,中国水体普遍受到多环芳烃污染,由于其强烈的憎水性和低溶解性,大部分多环芳烃沉积在底泥中.总结了学者们对国内外河流、湿地、河口等水体沉积物中多环芳烃污染的研究成果,探讨了多环芳烃的分布规律,发现沉积物中多环芳烃含量与流域内经济发展状况密切相关,反映了经济发展过程对环境造成的负面影响.相比于国外典型区域的多环芳烃浓度,中国沉积物的多环芳烃污染处于中等水平,但处于快速上升阶段,部分点位浓度已超过生态风险区间低值(4 000 ng/g),对人们的身体健康构成威胁,所以对多环芳烃的生态风险评价、污染物排放控制需进一步加强.     

微生物絮凝剂用于河道疏浚底泥快速脱水的研究

河道疏浚底泥含水率高、体积庞大,不便于储存、运输和资源化利用。首先需要对其进行减量化,使其快速脱水。通过筛选获得一株高效的微生物絮凝剂产生菌F22,通过试验获得其最佳培养条件:葡萄糖为碳源,酵母膏和尿素为氮源,培养时间为60h,培养温度为32℃。将F22菌株所产絮凝剂应用于底泥脱水,试验结果表明,当底泥泥浆(含水率为93%)体积为100mL时,絮凝体系最佳pH为8～10,助凝剂CaCl2最佳投加量为4～5mL,F22菌株发酵液最佳投加量为3mL;絮体在1min左右大部分沉降至底部,F22菌株所产絮凝剂能够使底泥快速脱水。F22菌株所产絮凝剂在絮凝过程中起作用的是糖类物质,其通过氢键结合力产生絮凝作用。     

糖脂类生物表面活性剂去除污染含水层中石油烃的研究

研究了糖脂类生物表面活性剂对石油烃的增溶,并将其用于污染含水层中石油烃的去除。结果表明:石油烃溶解度随着糖脂类生物表面活性剂浓度的增大而增大,糖脂类生物表面活性剂质量浓度为1 200mg/L时,石油烃溶解度达10 077.7mg/L;界面张力随着糖脂类生物表面活性剂浓度的增加而减小,糖脂类生物表面活性剂质量浓度为1mg/L时,界面张力为34.3mN/m,糖脂类生物表面活性剂质量浓度为800mg/L时,界面张力为5.2 mN/m。采用糖脂类生物表面活性剂对污染含水层进行清洗处理,在固液比(质量体积比)为1g∶2mL的体系中,糖脂类生物表面活性剂质量浓度为3 000mg/L,120r/min、10℃下振荡12h,石油烃去除率达70.82%。污染含水层柱冲洗结果表明,糖脂类生物表面活性剂质量浓度分别为1 200、3 000mg/L时,10倍孔隙体积的表面活性剂冲洗后,分别从污染砂样中去除41.81%和63.30%的石油烃。     

An assessment of natural biotransformation of petroleum hydrocarbons and chlorinated solvents at an aquifer plume transect

Field biogeochemical characterization and laboratory microcosm studies were performed to assess the potential for future biotransformation of trichloroethylene (TCE) and toluene in a plume containing petroleum hydrocarbons and chlorinated solvents at the former Wurtsmith Air Force Base in Oscoda, MI. In situ terminal electron accepting processes (TEAPs), contaminant composition and microbial phylogeny were studied at a plume transect 100 m downgradient of the source. The presence of reduced electron acceptors, relevant microbial communities, and elevated dissolved methane and carbon dioxide concentrations at the transect, as well as downgradient accumulation of BTEX metabolites and dechlorination products, indicated that past or current reductive dechlorination at the transect was likely driven by BTEX biodegradation in the methanogenic zone. However, TCE and toluene mineralization in sediment-groundwater microcosms without added electron acceptors did not exceed 5% during 300 days of incubation and was nearly invariant with original sediment TEAP, even following amendments of nitrogen and phosphorus. Mineralization rates were on the order of 0.0015-0.03 mumol/g day. After 8 months, microcosms showed evidence of methanogenesis, but CH4 and CO2 production arose from the degradation of contaminants other than toluene. Cis-dichloroethylene was observed in only one methanogenic microcosm after more than 500 days. It appears likely that spatially and temporally dynamic redox zonation at the plume transect will prevent future sustained reductive dehalogenation of highly chlorinated solvents, for during the course of a year, the predominant TEAP at the highly contaminated water table shifted from methanogenesis to iron- and sulfate-reduction. It is recommended that biotransformation studies combine considerations of long-term, spatially relevant changes in redox zonation with laboratory-scale studies of electron donor utilization and cometabolic substrate transformation to yield a more accurate assessment of natural bioattenuation of specific pollutants in aquifers contaminated by undefined organic waste mixtures.     

Aliphatic and polycyclic aromatic hydrocarbons in the surface sediments from the Eastern Aegean: assessment and source recognition of petroleum hydrocarbons

Materials and methods  

Aliphatic and polycyclic aromatic hydrocarbons (PAHs) were determined in surficial sediments from the Aegean Sea in the Eastern Mediterranean in 2008.     

Multimedia fate of petroleum hydrocarbons in the soil: Oil matrix of constructed biopiles

A dynamic multimedia fugacity model was used to evaluate the partitioning and fate of petroleum hydrocarbon fractions and aromatic indicator compounds within the soil: oil matrix of three biopiles. Each biopile was characterised by four compartments: air, water, soil solids and non-aqueous phase liquid (NAPL). Equilibrium partitioning in biopile A and B suggested that most fractions resided in the NAPL, with the exception of the aromatic fraction with an equivalent carbon number from 5 to 7 (EC₅₋₇). In Biopile C, which had the highest soil organic carbon content (13%), the soil solids were the most important compartment for both light aliphatic fractions (EC₅₋₆ and EC₆₋₈) and aromatic fractions, excluding the EC₁₆₋₂₁ and EC₂₁₋₃₅. Our starting hypothesis was that hydrocarbons do not degrade within the NAPL. This was supported by the agreement between predicted and measured hydrocarbon concentrations in Biopile B when the degradation rate constant in NAPL was set to zero. In all scenarios, biodegradation in soil was predicted as the dominant removal process for all fractions, except for the aliphatic EC₅₋₆ which was predominantly lost via volatilization. The absence of an explicit NAPL phase in the model yielded a similar prediction of total petroleum hydrocarbon (TPH) behaviour; however the predicted concentrations in the air and water phases were significantly increased with consequent changes in potential mobility. Further comparisons between predictions and measured data, particularly concentrations in the soil mobile phases, are required to ascertain the true value of including an explicit NAPL in models of this kind.     

Vertical distribution and effect of historical residual organochlorine pesticides on microbial community structure in sediment cores from an abandoned oxidation pond after dredging for 15 years

Environmental Science and Pollution Research - The vertical distribution pattern of 19 organochlorine pesticides (OCPs), together with microbial ester-linked fatty acid methyl ester (EL-FAME)...     

Suitability of Scirpus maritimus for petroleum hydrocarbons remediation in a refinery environment

Purpose  

In the ambit of a project searching for appropriate biological approaches for recovering a refinery soil contaminated with petroleum hydrocarbons (PHC), we compared results obtained in the absence and in the presence of the salt marsh plant Scirpus maritimus or Juncus maritimus or an association of these two plants, which were tested in the refinery environment. Synergistic effects caused by addition of a non-ionic surfactant and/or a bioaugmentation product were also investigated. Major challenges of this study were: field conditions and weathered contamination.