Seasonal changes in the structure of an intertidal community

Quantitative (0.25 m²) samples of macrofaunal (>1.0 mm) invertebrates were taken in each season from one habitat of an intertidal sandbar in the North Inlet estuary near Georgetown, South Carolina, USA. During all seasons the community inhabiting the sample site was numerically dominated by two species of haustoriid amphipods (Acanthohaustorius millsi and Pseudohaustorius caroliniensis). Seasonal changes at the community level were clearly controlled by the population dynamics of the numerically dominant species, and qualitative information on life histories was important to the interpretation of analyses' results.This work was supported by the Environmental Technology Center of Martin Marietta Corporation and the Belle W. Baruch Institute for Marine Biology and Coastal Research. It is Contribution No. 138 of the Belle W. Baruch Institute for Marine Biology and Coastal research.     

Influence of corallivory, competition, and habitat structure on coral community shifts

The species composition of coral communities has shifted in many areas worldwide through the relative loss of important ecosystem engineers such as highly branched corals, which are integral in maintaining reef biodiversity. We assessed the degree to which the performance of recently recruited branching corals was influenced by corallivory, competition, sedimentation, and the interactions between these factors. We also explored whether the species-specific influence of these biotic and abiotic constraints helps to explain recent shifts in the coral community in lagoons of Moorea, French Polynesia. Population surveys revealed evidence of a community shift away from a historically acroporid-dominated community to a pocilloporid- and poritid-dominated community, but also showed that the distribution and abundance of coral taxa varied predictably with location in the lagoon. At the microhabitat scale, branching corals grew mainly on dead or partially dead massive Porites ("bommies"), promontories with enhanced current velocities and reduced sedimentation. A demographic study revealed that growth and survival of juvenile Pocillopora verrucosa and Acropora retusa, the two most common branching species of each taxon, were affected by predation and competition with vermetid gastropods. By 24 months of age, 20-60% of juvenile corals suffered partial predation by corallivorous fishes, and injured corals experienced reduced growth and survival. A field experiment confirmed that partial predation by corallivorous fishes is an important, but habitat-modulated, constraint for branching corals. Competition with vermetid gastropods reduced growth of both branching species but unexpectedly also provided an associational defense against corallivory. Overall, the impact of abiotic constraints was habitat-specific and similar for Acropora and Pocillopora, but biotic interactions, especially corallivory, had a greater negative effect on Acropora than Pocillopora, which may explain the local shift in coral community composition.     

Seasonal changes in the structure of rhesus macaque social networks

Social structure emerges from the patterning of interactions between individuals and plays a critical role in shaping some of the main characteristics of animal populations. The topological features of social structure, such as the extent to which individuals interact in clusters, can influence many biologically important factors, including the persistence of cooperation, and the rate of spread of disease. Yet, the extent to which social structure topology fluctuates over relatively short periods of time in relation to social, demographic, or environmental events remains unclear. Here, we use social network analysis to examine seasonal changes in the topology of social structures that emerge from socio-positive associations in adult female rhesus macaques (Macaca mulatta). Behavioral data for two different association types (grooming and spatial proximity) were collected for females in two free-ranging groups during two seasons: the mating and birth seasons. Stronger dyadic bonds resulted in social structures that were more tightly connected (i.e., of greater density) in the mating season compared to the birth season. Social structures were also more centralized around a subset of individuals and more clustered in the mating season than those in the birth season, although the latter differences were mostly driven by differences in density alone. Our results suggest a degree of temporal variation in the topological features of social structure in this population. Such variation may feed back on interactions, hence affecting the behaviors of individuals, and may therefore be important to take into account in studies of animal behavior.     

Variability in nursery function of tropical seagrass beds during fish ontogeny: timing of ontogenetic habitat shift

Seagrass beds are often considered to be important nurseries for coral reef fish, yet the effectiveness of these nursery functions (refuge and food availability) at different juvenile stages is poorly understood. To understand how the demands of juvenile fish on seagrass nursery functions determines the timing of ontogenetic habitat shifts from seagrass beds to coral reefs, we conducted visual transect survey and field tethering and caging experiments on three different sizes of the coral reef fish Pacific yellowtail emperor (Lethrinus atkinsoni) during its juvenile tenure in seagrass beds at Ishigaki Island, southern Japan. The study showed that although the number of individual L. atkinsoni juveniles decreased by >90 % during their stay in the seagrass nursery, the shelter and/or food availability functions of the nursery, at least for a juvenile size of approximately 5 cm total length (TL), provided the best survival and growth option. The timing of ontogenetic migration to coral reefs of larger fish (>8 cm TL) was attributed to foraging efficiency for larger food items in different habitats. Overall, the function of the seagrass bed nursery changed with juvenile body size, with marginally higher survival and significantly greater growth rates during early juvenile stages in seagrass beds compared to coral reefs. This would contribute to the enhancement in the number of individuals eventually recruited to adult populations.     

Seasonal and spatial changes in the larval fish fauna within a large temperate Australian estuary

A total of 66814 fish larvae, representing 37 families and 74 species, were collected in samples taken monthly between January 1986 and April 1987 from 13 sites located at frequent intervals throughout the large Swan Estuary in south-western Australia. The Gobiidae was the most abundant family, comprising 88.2% of the total number of larvae, followed by the Clupeidae (3.4%), Engraulididae (2.9%) and Blenniidae (1.0%). The most abundant species were Pseudogobius olorum (53.3%), Arenigobius bifrenatus (31.2%) and Engraulis australis (2.9%). Abundance of fish larvae in the lower, middle and upper regions of the estuary each reached a maximum between mid-spring and early summer, 2 to 4 mo before the attainment of maximum temperatures. Larvae of species such as Nematalosa vlaminghi and Apogon rueppellii were collected only between November and February, whereas those of others such as P. olorum, E. australis and Leptatherina wallacei were present over many months. The times and locations of capture of larvae have been related to the distribution and breeding periods of the adults of these species. The mean monthly number of species was far greater in the lower than upper estuary (14.7 vs 2.7), whereas the reverse was true for mean monthly concentration (42 vs 197 larvae per 100 m³). Classification, using the abundance of each of the 74 species recorded at the different sites, showed that the composition of the larval fish fauna in the lower, middle and upper estuary differed markedly from each other. Most larvae caught in the lower estuary belonged to marine species, whereas those in the upper estuary almost exclusively represented species that spawn within the estuary. The fact that the larvae of the 59 species of marine teleosts recorded during this study were restricted mainly to the lower estuary, and yet contributed only 6.2% to the total numbers for the whole estuary, helps to account for the relatively high species diversity in this region. The lack of penetration of many of these larvae beyond the first 12.5 km of the estuary presumably reflects the weak tidal effect in the wide basins of the middle estuary and saline regions of the tributary rivers. The larvae of the 13 teleosts that typically spawn within the estuary contributed 93.8% to the total numbers of larvae. Most of these estuarine-spawned larvae belong to teleosts that deposit demersal eggs and/or exhibit parental care (egg-guarding and oral and pouch-brooding), characteristics which would maximize their chances of retention within the estuary.     

Scale-dependent changes in the importance of larval supply and habitat to abundance of a reef fish

While there is great interest in the degree to which local interactions "scale-up" to predict regional patterns of abundance, few studies in marine systems have simultaneously examined patterns of abundance at both the large scale (tens of kilometers) typical of larval movement and the small scale (meters) typical of post-settlement interactions. We addressed this gap by monitoring larval supply, adult survivorship, and giant kelp (Macrocystis pyrifera, a primary habitat-forming species) abundance for 13 populations of kelp bass (Paralabrax clathratus) spread over approximately 200 km in the Santa Barbara Channel, California, USA. At the small, within-site scale, both recruitment and adult survivorship of kelp bass were density-dependent and positively related to kelp abundance. At the larger, among-site scale, the spatial pattern of adult kelp bass abundance was predicted well by the pattern of kelp bass larval supply, but there was a consistent negative spatial relationship between kelp abundance and kelp bass larval supply despite the positive effects of kelp on kelp bass at the smaller spatial scale. This large-scale negative relationship was likely a product of a channel-wide spatial mismatch between oceanographic conditions that favor kelp survival and those that concentrate and distribute fish larvae. These results generally support the recruit-adult hypothesis: kelp bass populations are limited by recruitment at low recruit densities but by density-dependent competition for food resources and/or predator refuges at high recruit densities. At the same time, spatial variation in kelp abundance produced substantial spatiotemporal heterogeneity in kelp bass demographics, which argues for a multispecies, metacommunity approach to predicting kelp bass dynamics.     

Comparative study of the structure of some tropical and temperate marine soft-bottom macrobenthic communities

Macrobenthic sampling of a transect of six stations on the North coast of Central Java in October 1985 revealed three distinct communities which can be regarded as paraliels of those from north temperate waters: (i) An Amphioplus (Lymanella) laevis/Lovenia sp. community parallel with the Amphiura chiajei/Brissopsis lyrifera community. (ii) A Tellinides timorensis community parallel with Tellina spp. communities. (iii) A Laciolina philippinarum community parallel with Macoma spp. communities. A strict comparison of the structure of the first two of these communities with their counterparts in England shows that within-habitat diversity is similar in both regions. Diversity at two shallower subtidal stations is higher than at two deeper stations: this is attributed to the effects of natural, low-level, physical disturbance which maintains the communities in a sub-climax stage. Total abundance and biomass of the macrobenthic fauna was lower at the Javanese stations than in their temperate counterparts.     

Seasonal and areal changes in standing stocks of phytoplankton,zooplankton and micronekton in the eastern tropical pacific

Five standing stocks were measured together at similar latitudes and longitudes on seasonally repetitive cruises in 3 areas — western, eastern, and southern — of the eastern tropical Pacific. The stocks were chlorophyll a at 0 to 150 m depth (mg/m²), night and day zooplankton at 0 to 200 m depth (ml/1000 m³), and night crustacean micronekton and fish-pluscephalopod micronekton at 0 to 200 m depth (ml/1000 m³). The logarithms of the measurements of each stock in each area were subjected to analysis of variance with the following factors: season (2 month period), latitude, and longitude. Seasonal coverage was most comprehensive, with 7 successive periods, in the western area (approximately 16° N to 3° S latitude, 100° to 122° W longitude). Most stocks in most parts of the western area had a simple seasonal cycle of low amplitude, with a single maximum and minimum that usually differed by a factor <2; some stocks in some parts of the area exhibited no seasonal cycle; all statistically significant cycles, except for fish-plus-cephalopod micronekton, were similar in phase. In the other two areas, located broadly to the east and south of the western area, suitable measurements were made at only 2 periods (opposite seasons) of the year. There were indications of phase differences between chlorophyll a and zooplankton in the eastern area, which should be further investigated. Most standing stocks declined gradually from east to west, and were higher in known upwelling areas and areas of shoal thermocline than elsewhere.     

Maturation shifts in a temperate marine fish population cannot be explained by simulated changes in temperature-dependent growth and maturity

To disentangle genetic and environmental influences on phenotypic traits that influence maturation of fish, it would be useful to predict the expected change due to environment alone to compare with observations. This requires a realistically scaled, species-specific life history model of environmentally determined variation in individual growth and maturation. In this study, inter-annual variability in the proportion of mature haddock in the west North Sea was predicted using a stochastic, individual-based simulation model incorporating a temperature-dependent maturation threshold. This species and region are particularly relevant to the debate about the relative importance of genetic and climate change because North Sea haddock have experienced both high fishing mortality and substantial warming in recent decades. Using observed temperatures in combination with temperature-dependent models for growth and maturation, the simulation model predicted year-to-year variation in length and maturity at age expected for cohorts produced from 1979 to 2006. The simulated proportions mature at age 2 were then compared to the observed proportions in an annual bottom trawl survey. Although the model explained much of the high-frequency variation in maturation, the simulated time trend under-represented the rate of increase in the observed trend in proportions mature. This inability of the temperature-dependent life history model to predict the magnitude of change appears consistent with a long-term decline in the maturation threshold. This result provides indirect support for a genetic change in a key life history trait.     

Ontogeny of diet changes in a tropical benthic carnivorous fish, Parupeneus barberinus (Mullidae): relationship between foraging behaviour, habitat use, jaw size, and prey selection

Parupeneus barberinus forages on benthic invertebrates using a wide range of foraging modes, including vigorous digging in the substratum, resulting in considerable disturbance to the benthos. Polychaetes were the most important prey item for all size classes, but fishes less than 120 mm total length consumed more small ostracods and nematodes than did larger fishes. Fishes greater than 120 mm total length consumed mostly bivalves, and fishes over 240 mm total length consumed mostly bivalves and crabs. A morphological examination of the feeding apparatus suggested that the size of important prey items consumed was determined by gape height and jaw width. Prey available to different size classes of fishes was determined by combining information on microhabitat use, foraging behaviours, and prey volumes in the substratum. Small fishes spent more time foraging on the reef flat and slope, compared with larger fishes that foraged mostly on the reef edge and base. In addition smaller fishes foraged mostly in the upper 2 cm of sediment, whereas larger fishes often foraged to depths of 10 cm. Selection ratios showed that different size classes of fishes selectively extracted different prey items from the substratum. Small fishes showed a preference for ostracods whereas large fishes selected for bivalves and crabs. Although polychaetes were the dominant prey item for all size classes, they were consistently selected against.     

Satellite detection of bird communities in tropical countryside.

The future of biodiversity hinges partly on realizing the potentially high conservation value of human-dominated countryside. The characteristics of the countryside that promote biodiversity preservation remain poorly understood, however, particularly at the fine scales at which individual farmers tend to make land use decisions. To address this problem, we explored the use of a rapid remote sensing method for estimating bird community composition in tropical countryside, using a two-step process. First, we asked how fine-grained variation in land cover affected community composition. Second, we determined whether the observed changes in community composition correlated with three easily accessible remote sensing metrics (wetness, greenness, and brightness), derived from performing a tasseled-cap transformation on a Landsat Enhanced Thematic Mapper Plus image. As a comparison, we also examined whether the most commonly used remote sensing indicator in ecology, the Normalized Difference Vegetation Index (NDVI), correlated with community composition. We worked within an agricultural landscape in southern Costa Rica, where the land comprised a complex and highly heterogeneous mosaic of remnant native vegetation, pasture, coffee cultivation, and other crops. In this region, we selected 12 study sites (each < 60 ha) that encompassed the range of available land cover possibilities in the countryside. Within each site, we surveyed bird communities within all major land cover types, and we conducted detailed field mapping of land cover. We found that the number of forest-affiliated species increased with forest cover and decreased with residential area across sites. Conversely, the number of agriculture-affiliated species using forest increased with land area devoted to agricultural and residential uses. Interestingly, we found that the wetness and brightness metrics predicted the number of forest- and agriculture-affiliated species within a site as well as did detailed field-generated maps of land cover. In contrast, NDVI and the closely correlated greenness metric did not correlate with land cover or with bird communities. Our study shows the strong potential of the tasseled-cap transformation as a tool for assessing the conservation value of countryside for biodiversity.     

Diurnal space utilization in coral reef fish communities

The diurnal use of space by 25 resident species of coral reef fishes was investigated along three depth (10 to 40 m) transects over an 18 month period. Emphasis was placed on the small, cryptic members of the communities. Three aspects of the use of space — temporal utilization, occupancy and time span — are defined and quantified for each of the species. In addition, an estimate of the diurnal home range volume of each species is provided. The territorial pomacentrids showed the highest level of temporal utilization, holding the same territories throughout the study. The consistent presence of the holocentrid species within the reef infrastructure had the potential to influence the space available to other species. Some species residing in tube-worm holes and sponges also exhibited constant use of space.     

Bee community shifts with landscape context in a tropical countryside.

The ongoing scientific controversy over a putative "global pollination crisis" underscores the lack of understanding of the response of bees (the most important taxon of pollinators) to ongoing global land-use changes. We studied the effects of distance to forest, tree management, and floral resources on bee communities in pastures (the dominant land-use type) in southern Costa Rica. Over two years, we sampled bees and floral resources in 21 pastures at three distance classes from a large (approximately 230-ha) forest patch and of three common types: open pasture; pasture with remnant trees; and pasture with live fences. We found no consistent differences in bee diversity or abundance with respect to pasture management or floral resources. Bee community composition, however, was strikingly different at forest edges as compared to deforested countryside only a few hundred meters from forest. At forest edges, native social stingless bees (Apidae: Meliponini) comprised approximately 50% of the individuals sampled, while the alien honeybee Apis mellifera made up only approximately 5%. Away from forests, meliponines dropped to approximately 20% of sampled bees, whereas Apis increased to approximately 45%. Meliponine bees were also more speciose at forest edge sites than at a distance from forest, their abundance decreased with continuous distance to the nearest forest patch, and their species richness was correlated with the proportion of forest cover surrounding sample sites at scales from 200 to 1200 m. Meliponines and Apis together comprise the eusocial bee fauna of the study area and are unique in quickly recruiting foragers to high-quality resources. The diverse assemblage of native meliponine bees covers a wide range of body sizes and flower foraging behavior not found in Apis, and populations of many bee species (including Apis), are known to fluctuate considerably from year to year. Thus, the forest-related changes in eusocial bee communities we found may have important implications for: (1) sustaining a diverse bee fauna in tropical countryside; (2) ensuring the effective pollination of a diverse native plant community; and (3) the efficiency and stability of agricultural pollination, particularly for short-time-scale, mass-flowering crops such as coffee.     

Seasonal and decadal changes in distribution patterns of Halobates (Hemiptera: Gerridae) populations in the eastern tropical Pacific

Five species of the marine insect Halobates share similar ecology but have distinct biogeographic ranges in the eastern tropical Pacific, a region from approximately 75°W–160°W and 10°S–35°N. Between 2001 and 2010, the Sea Education Association collected Halobates from 682 neuston tows (surface net 1 m × 0.5 m, 335-μm mesh) during fifteen cruises between San Diego, USA, Mexico and Tahiti. Total Halobates spp. densities varied substantially from year to year, but our data do not show a sustained change from a data set collected 40 years earlier from 1967 to 1968 (Cheng and Shulenberger in Fish Bull 78(3):579–591, 1980). Halobates are sensitive to sea surface temperature and we observed significant differences in species distributions over time, but these were not due to differences in water temperature or climate change. Our analyses show that the patterns observed are attributable to substantial but previously undescribed seasonal shifts that occur each year in the ranges for both Halobates sobrinus and Halobates micans. There is substantial overlap in ranges during seasonal shifts, but very little co-occurrence of H. sobrinus and H. micans in individual net tows, suggesting biological mechanisms rather than physical factors are restricting distribution and co-occurrence of these two species.     

Wave exposure,swimming performance,and the structure of tropical and temperate reef fish assemblages

We examined the relationship between swimming performance, wave exposure, and the distribution patterns of labrids on temperate rocky reefs, in comparison with previous functional analyses of a tropical assemblage. Visual censuses of the distribution and abundance of labrids across two major gradients of wave exposure (depth and aspect to prevailing winds) were made at two offshore islands near Port Stephens, New South Wales, Australia. Distinct shifts in species composition and abundance were evident between high and low wave exposure habitats on temperate rocky reefs, particularly between deep and shallow habitats on exposed reef fronts. The swimming performances of temperate labrids were assessed through examination of pectoral fin shape (aspect ratio) and in situ swimming speeds. A diversity of pectoral fin morphologies was exhibited within this temperate assemblage, ranging from rounded to tapered fins (aspect ratios of 0.52 and 1.43, respectively). Fin shape was strongly correlated (Pearsons correlation 0.884, P<0.001) with swimming speed (ranging from 1.05 and 3.06 body lengths s^–1), in a relationship comparable to that observed in tropical labrids. Inter-specific differences in swimming ability provided some explanation for differences in the distribution and abundance of temperate labrids in relation to wave exposure. However, our findings suggest that although coral reef labrids appear to predominantly use high aspect-ratio fins to successfully occupy wave-exposed habitats, temperate labrids appear to be using an enhanced swimming ability through increased body size.Communicated by G.F. Humphrey, Sydney     

Microhabitat utilisation patterns in cryptobenthic coral reef fish communities

The cryptobenthic reef fish communities from four microhabitats at Orpheus Island, central Great Barrier Reef are described. Eighty-four 0.4m² samples yielded a total of 368 individuals from 42 species in eight families, with a mean density of 11 individuals m^–2 (±1.7SE) and 2.9 species 0.4 m^–2 (±0.2SE). Caves contained the highest number of both individuals (120) and species (26), followed by sand/rubble, soft coral, and open reefs. Microhabitat associations included cave and soft coral specialists. Site fidelity in 71 tagged individuals of 4 species was high, with a mean recapture rate of 53% (±8.4SE) remaining within the ~0.4 m² sampling area after a 48-h period. Behavioural observations also reflect this limited movement, with the dominant mode of behaviour in 7 species being a motionless state (67.5% ±11.6SE), followed by feeding (21.8% ±8.7SE), hiding (6.3% ±1.6SE), and swimming (4.4% ±1.5SE). Two distinct behavioural groups are identified: (1) sedentary forms, characterised by long periods of immobility (5 species); and (2) winnowers, characterised by long feeding bouts (2 species). The fine-scale partitioning of microhabitats, restricted home ranges, and sedentary behaviour of many cryptobenthic reef fish species suggest that this reef fish community exhibits similar patterns of habitat utilisation to their larger reef-fish counterparts, but at a much finer scale.     

Current shifts and kin aggregation explain genetic patchiness in fish recruits

The scales of population structure in marine species depend on the degree to which larvae from different populations are mixed in the plankton. There is an intriguing trend in marine population genetic studies of significant genetic structure for larvae, recruits, or populations at fine scales that is unpatterned across space and changes through time. This "chaotic genetic patchiness" suggests that larval pools are not well mixed in the plankton. However, few studies have been able to distinguish among potential causes of spatial and temporal genetic heterogeneity: changes in larval migration patterns, changes in environmental selection, or stochasticity caused by "sweepstakes" reproductive success of spawners creating detectable family structure. Here we use microsatellite markers to show that significant allele frequency shifts occurred sporadically in space and time for cohorts of recruits of Paralabrax clathratus (kelp bass) collected once every two weeks over two years from five sites in the Santa Barbara Channel, California, USA. We found that the pattern of genetic differentiation among cohorts was explained by a combination of (1) family structure in some cohorts, evidenced by half and full siblings, and (2) an indication of changes in larval delivery. It is unlikely but possible that environmental selection also plays a role. Although sampling of potential source populations was incomplete, cohorts arriving during western current flows show most genetic similarity with a population sample collected in the west, and cohorts arriving during current flows from the southeast show similarity with population samples collected in the south and east. Despite the family structure apparent in some cohorts, these "sweepstakes" events occur on too fine a scale to create lasting year class genetic structure. The results corroborate oceanographic models of larval dispersal, which suggest that larval mixing in the plankton is less extensive than previously believed.