How do larvae attach to a solid in a laminar flow?

A hydrodynamic model explaining the mechanism of contact of marine larvae in vertical flows is presented. Two hydrodynamic factors—flow vorticity and larval self-propulsion—are the key components in the mathematical model. It is shown that flow vorticity causes a larva to rotate and change the direction of self-thrust, thus leading to its migration across the mean flow. The latter motion is of an oscillatory nature. Contact will be enabled only for sufficiently large amplitudes of oscillations. Simple expressions for the probability of initial contact are obtained for two-dimensional Couette and Poiseuille flows. The three-dimensional motion of a larva in a tube is studied using the Monte-Carlo simulations. It is shown that contact probability depends mainly on the ratio of the characteristic flow velocity and the larva’s swimming speed. The theoretical results compare favorably with available experimental data. Possible applications of the method and results presented here to the classical problem of larval attachment to bodies of general geometry are briefly discussed in the concluding section.     

Human–wildlife coexistence in a changing world

Human–wildlife conflict (HWC) is a key topic in conservation and agricultural research. Decision makers need evidence-based information to design sustainable management plans and policy instruments. However, providing objective decision support can be challenging because realities and perceptions of human–wildlife interactions vary widely between and within rural, urban, and peri-urban areas. Land users who incur costs through wildlife argue that wildlife-related losses should be compensated and that prevention should be subsidized. Supporters of human–wildlife coexistence policies, such as urban-dwelling people, may not face threats to their livelihoods from wildlife. Such spatial heterogeneity in the cost and benefits of living with wildlife is germane in most contemporary societies. This Special Section features contributions on wildlife-induced damages that range from human perspectives (land use, psychology, governance, local attitudes and perceptions, costs and benefits, and HWC and coexistence theory) to ecological perspectives (animal behavior). Building on current literature and articles in this section, we developed a conceptual model to help frame HWC and coexistence dimensions. The framework can be used to determine damage prevention implementation levels and approaches to HWC resolution. Our synthesis revealed that inter- and transdisciplinary approaches and multilevel governance approaches can help stakeholders and institutions implement sustainable management strategies that promote human–wildlife coexistence.     

The erect ‘penis’ is a flag of submission in a female-dominated society: greetings in Serengeti spotted hyenas

In East Africa, spotted hyenas live in large clans in a highly structured society dominated by females. A clan is a fission-fusion society where members are often solitary or in small groups. Spotted hyenas have a ritualized greeting during which two individuals stand parallel and face in opposite directions. Both individuals usually lift their hind leg and sniff or lick the anogenital region of the other. The unique aspect of greetings between individuals is the prominent role of the erect penis in animals of both sex. Female spotted hyenas have fused outer labiae and a pseudo-penis formed by the clitoris which closely resembles the male penis and can be erected. During greetings subordinates signalled submission with gestures which were not necessarily reciprocated by the dominant participant. Asymmetries were most pronounced in greetings between adult females where the probability of asymmetries increased with the divergence in rank between partners. Greetings between adult females and males were uncommon and restricted to males above median rank, principally the alpha male. Models of primate affiliative behavior assume that benefits derived from social relationships with different individuals are not equal and that individuals are selected to maximize the benefits they receive from social relationships with others. The observed distribution of greetings between partners of different rank matched the predictions of these models. An examination of non-adaptive hypotheses on the evolution of the pseudo-penis demonstrated that the conventional scenario linking (initial) virilization of female genitalia with selection for female dominance does not explain either the initial virilization, nor the evolution of the pseudo-penis to its current form and use. We sketch a new scenario that links (1) initial virilization to the occurrence of neonatal siblicide amongst members of a twin litter, and (2) costs of maintenance, pseudo-penile control over copulation and male submission. Our analysis confirms previous adaptive hypotheses on the function of the pseudo-penis in greetings and suggests new hypotheses to account for hitherto unexplained features. Correspondence to: M.L. East     

Fourth-corner correlation is a score test statistic in a log-linear trait–environment model that is useful in permutation testing

Ecologists wish to understand the role of traits of species in determining where each species occurs in the environment. For this, they wish to detect associations between species traits and environmental variables from three data tables, species count data from sites with associated environmental data and species trait data from data bases. These three tables leave a missing part, the fourth-corner. The fourth-corner correlations between quantitative traits and environmental variables, heuristically proposed 20 years ago, fill this corner. Generalized linear (mixed) models have been proposed more recently as a model-based alternative. This paper shows that the squared fourth-corner correlation times the total count is precisely the score test statistic for testing the linear-by-linear interaction in a Poisson log-linear model that also contains species and sites as main effects. For multiple traits and environmental variables, the score test statistic is proportional to the total inertia of a doubly constrained correspondence analysis. When the count data are over-dispersed compared to the Poisson or when there are other deviations from the model such as unobserved traits or environmental variables that interact with the observed ones, the score test statistic does not have the usual chi-square distribution. For these types of deviations, row- and column-based permutation methods (and their sequential combination) are proposed to control the type I error without undue loss of power (unless no deviation is present), as illustrated in a small simulation study. The issues for valid statistical testing are illustrated using the well-known Dutch Dune Meadow data set.     

Nanotechnology in cosmetics: a boon or bane?

Recent advances in the field of nanotechnology enabled the manufacturing of elaborated nanometer-sized particles for various biomedical applications. The cosmetic industry is one of the most enthusiastic early adopters of nanotechnology which routinely uses nano-scale ingredients. However, in the absence of mandatory product labeling, it is difficult to estimate the number of cosmetics, sunscreens and personal care products containing nanoparticles that are now commercially available. The increased capacity of nanoparticles to penetrate skin and gain access to human cells is a double-edged sword as it may be useful for medical purposes, but might also result in far greater uptake of substances that exert adverse health effects. Since nanomaterials represent a large group of structurally, physically, and chemically variable substances, specific toxicological studies are required for each product prior to commercialization. This review aims to delineate the most investigated applications, risk and safety considerations, and regulation of nanotechnology in the field of cosmetics.     

Threshold management in a coupled economic–ecological system

Economic analysis of optimal ecosystem management in the presence of a threshold has typically ignored the potential for induced behavioral responses. This paper contributes to the literature on non-convex ecosystem management by considering the implications of a particular behavioral response in a regional economy – that of amenity-led growth – to changes in ecosystem services generated by a lake ecosystem subject to a eutrophication threshold. The essential policy challenge is to achieve optimal levels of lake nutrients and urbanization given that improvements to water quality will induce additional migration and urbanization in the region with attendant ecological impacts. We show that policies that ignore the recursive relationship between urbanization and water quality unintentionally exacerbate boom-bust cycles of regional growth and decline and risk pushing the system towards long-run economic decline. In contrast, the optimal policy accounts for the behavioral feedbacks to improved ecosystem services, and balances regional growth and ecological degradation.     

Issues in information theory-based statistical inference—a commentary from a frequentist’s perspective

After several decades during which applied statistical inference in research on animal behaviour and behavioural ecology has been heavily dominated by null hypothesis significance testing (NHST), a new approach based on information theoretic (IT) criteria has recently become increasingly popular, and occasionally, it has been considered to be generally superior to conventional NHST. In this commentary, I discuss some limitations the IT-based method may have under certain circumstances. In addition, I reviewed some recent articles published in the fields of animal behaviour and behavioural ecology and point to some common failures, misunderstandings and issues frequently appearing in the practical application of IT-based methods. Based on this, I give some hints about how to avoid common pitfalls in the application of IT-based inference, when to choose one or the other approach and discuss under which circumstances a mixing of the two approaches might be appropriate.     

“Anting” in Blue Jays: evidence in support of a food-preparatory function

Summary.  Anting, the plumage-dipping behavior to which ants (mostly formicines) are commonly subjected by birds (mostly passerines), is shown in tests with hand-raised Blue Jays (Cyanocitta cristata) and the ant Formica exsectoides to be instinctive: the birds displayed typical renditions of the behavior on the first occasion that they encountered ants. Evidence is presented supportive of the view that anting is a strategy by which birds render ants fit for ingestion. Formicine ants are ordinarily protected by their formic acid-containing spray. Being wiped into the bird’s plumage causes them to discharge that spray, without harm to the bird, to the point of almost total emptying of the glandular sac in which the secretion is stored. The ants are therefore essentially secretion-free by the time they are swallowed. Further evidence indicates that it is the ant’s possession of the acid sac that triggers the anting behavior in the bird. If F. exsectoides are surgically deprived of their acid sac, they are eaten by the birds without first being subjected to anting. Data are also presented indicating that the ant’s crop, which is especially capacious in formicines (its contents may amount to over 30% of the formicine’s mass), and which appears to survive the anting procedure intact, constitutes, at least when laden, a valuable component of the trophic package that the bird accesses by anting.     

When is a male not a male? Sex recognition and choice in two sex-changing species

For dioecious species, choosing a mate of the same sex can have reproductive costs. For sex-changing animals, however, a lack of sex recognition may not carry a reproductive cost, as pairs that were initially same-sex can become opposite-sex pairs as one partner changes sex. The strength of sex discrimination in sex changers, then, should depend on the duration of mating associations and whether the time of sex change is influenced by social situation (“flexible” sex change). We studied two species of marine snails that change sex from male to female, one with flexible sex change and long-term or permanent mating associations (Crepidula fornicata) and one with short-term pairings and relatively fixed time of sex change (Crepidula convexa), to determine whether either species exhibits sex recognition and whether members of C. convexa show stronger sex discrimination. In laboratory experiments, small males, the choosing animals, were placed with either a male or a female conspecific (no-choice experiments) or given a choice of a male or female (choice experiments). We controlled for shell length in all experiments, as relative size may influence sex change or choice. Males of both species paired more often with females than males, but, as predicted, males of C. convexa showed stronger discrimination: When given a choice, no C. convexa male paired with another male. In contrast, some C. fornicata males always chose other males even when given the choice of a female. These results suggest that sex recognition can be adaptive even for sex changers but demonstrate that the level of sex recognition will depend on other aspects of reproductive behavior.     

Water budget and the consequent duration of canopy carbon gain in a teak plantation in a dry tropical region: Analysis using a soil–plant–air continuum multilayer model

A soil–plant–air continuum multilayer model was used to numerically simulate canopy net assimilation (A_n), evapotranspiration (ET), and soil moisture in a deciduous teak plantation in a dry tropical climate of northern Thailand to examine the influence of soil drought on A_n. The timings of leaf flush and the end of the canopy duration period (CDP) were also investigated from the perspective of the temporal positive carbon gain. Two numerical experiments with different seasonal patterns of leaf area index (LAI) were carried out using above-canopy hydrometeorological data as input data. The first experiment involved seasonally varying LAI estimated based on time-series of radiative transmittance through the canopy, and the second experiment applied an annually constant LAI. The first simulation captured the measured seasonal changes in soil surface moisture; the simulated transpiration agreed with seasonal changes in heat pulse velocity, corresponding to the water use of individual trees, and the simulated A_n became slightly negative. However, in the second simulation, A_n became negative in the dry season because the decline in stomatal conductance due to severe soil drought limited the assimilation, and the simultaneous increase in leaf temperature increased dark respiration. Thus, these experiments revealed that the leaflessness in the dry season is reasonable for carbon gain and emphasized the unfavorable soil water status for carbon gain in the dry season. Examining the duration of positive A_n (DPA) in the second simulation showed that the start of the longest DPA (LDPA) in a year approached the timing of leaf flush in the teak plantation after the spring equinox. On the other hand, the end appeared earlier than that of all CDPs. This result is consistent with the sap flow stopping earlier than the complete leaf fall, implying that the carbon assimilation period ends before the completion of defoliation. The model sensitivity analysis in the second simulation suggests that a smaller LAI and slower maximum rate of carboxylation likely extend the LDPA because soil water from the surface to rooting depth is maintained longer at levels adequate for carbon gain by decreased canopy transpiration. The experiments also suggest that lower soil hydraulic conductivity and deeper rooting depth can postpone the end of the LDPA by increasing soil water retention and the soil water capacity, respectively.     

Sex-biased dispersal in a long-lived polygynous reptile (Crocodylus johnstoni )

We compared natal dispersals of freshwater crocodiles (Crocodylus johnstoni) against the prediction of male dispersal bias for a polygynous mating system. The crocodiles inhabited a linear series of pools and we calculated the net distances from natal pools to recapture locations some 12–18 years later, at maturity. Philopatry was assessed in terms of adult social distances. A female social distance was 0.46 pools and a male social distance was 1.0 pool. By these criteria, both sexes showed low levels of philopatry (7–12%). However, individuals of both sexes dispersed from the natal site long before they were sexually mature. Divergence in dispersal patterns by sex occurred after the maturity threshold, as males dispersed two to three times farther than females. Intrasexual competition by males is resolved by a size-based hierarchy. The displacement of small males from local mating access is a probable cause of the longer dispersals undertaken by males. Competition, rather than inbreeding avoidance, is driving dispersal in this population of freshwater crocodiles. Received: 8 May 1998 / Accepted after revision: 26 June 1998     

Accumulation trends of metals and a metalloid in the freshwater crayfish Astacus leptodactylus from Lake Yeniçağa (Turkey)

This study aims to determine the extent of metal pollution in Lake Yeniça?a (Bolu, Turkey) by investigating the accumulation trends of five metals (Al, Cu, Fe, Ni and Zn) and a metalloid (As) in gills, exoskeleton, hepatopancreas and abdominal muscles of the freshwater crayfish Astacus leptodactylus. Principal component analysis (PCA), cluster analysis (CA), correlation analysis and analysis of variance (ANOVA) were utilised to determine the accumulation profiles of each element over four seasons. The greatest element accumulation was found to occur in the gills. All elements in exoskeletal tissue displayed positive correlations with each other, a similar trend was also observed in the hepatopancreas samples. Strong (r=0.868) and very strong (r=0.960) positive correlations were found between the accumulations of Al and Fe in gills and the exoskeleton, respectively. Correlations in tissue accumulation rates are discussed in the context of metabolic roles and impacts associated with the elements tested. Elemental compositions of Yeniça?a water and sediment samples were also investigated to determine whether the composition of the surrounding environment matches the metal accumulation trends of tissue samples. We demonstrate that, by the criteria set by the United States Environmental Protection Agency, Lake Yeniça?a is heavily polluted in terms of As and Ni.     

Long-term changes in phytoplankton phenology and community structure in the Bahía Blanca Estuary, Argentina

The phytoplankton of the Bahía Blanca Estuary, Argentina, has been surveyed since 1978. Chlorophyll a, phytoplankton abundance, species composition and physico-chemical variables have been fortnightly recorded. From 1978 to 2002, a single winter–early spring diatom bloom has dominated the main pattern of phytoplankton interannual variability. Such pattern showed noticeable changes since 2006: the absence of the typical winter bloom and changes in phenology, together with the replacement of the dominant blooming species, i.e. Thalassiosira curviseriata, and the appearance of different blooming species, i.e. Cyclotella sp. and Thalassiosira minima. The new pattern showed relatively short-lived diatom blooms that spread throughout the year. In addition, shifts in the phytoplankton size structure toward small-sized diatoms, including the replacement of relatively large Thalassiosira spp. by small Cyclotella species and Chaetoceros species have been noticed. The changes in the phenology and composition of the phytoplankton are mainly attributed to warmer winters and the extremely dry weather conditions evidenced in recent years in the Bahía Blanca area. Changing climate has modified the hydrological features in the inner part of the estuary (i.e. higher temperatures and salinities) and potentially triggered the reorganization of the phytoplankton community. This long-term study provides evidence on species-specific and structural changes at the bottom of the pelagic food web likely related to the recent hydroclimatic conditions in a temperature estuary of the southwestern Atlantic.     

Sensitivity of a coupled physical–biological model to turbulence: high-frequency simulations in a northern Adriatic station

This paper investigates the impacts of different turbulence models on the biological state at an ocean station in the northern Adriatic sea, named S3, comparing them with other uncertainties inherent to coupled physical–biological simulations. The numerical tool is a 1-D model resulting from the coupling of two advanced numerical models. The hydrodynamic part is modelled using the General Ocean Turbulence Model (www.gotm.net), in a version adopting state-of-the-art second-moment Turbulence Closure Models (TCMs). Marine biogeochemistry is parameterized with the Biogeochemical Flux Model (http://www.bo.ingv.it/bfm), which is a direct descendant of ERSEM (European Regional Sea Ecosystem Model). Results, obtained by forcing the model with hourly wind and solar radiation data and assimilating salinity casts, are compared against monthly observations made at the station during 2000–2001. Provided that modern second-moment TCMs are employed, the comparisons indicate that both the physical and the biological dynamics are relatively insensitive to the choice of the particular scheme adopted, suggesting that TCMs have finally ‘converged’ in recent years. As a further example, the choice of the nutrient boundary conditions has an impact on the system evolution that is more significant than the choice of the specific TCM, therefore representing a possible limitation of the 1-D model applied to stations located in a Region of Freshwater Influence. The 1-D model simulates the onset and intensity of the spring–summer bloom quite well, although the duration of the bloom is not as prolonged as in the data. Since local dynamics appears unable to sustain the bloom conditions well into summer, phytoplankton at the station was most likely influenced by river input or advection processes, an aspect that was not found when the S3 behaviour was adequately modelled using climatological forcings. When the focus is in predicting high-frequency dynamics, it is more likely that lateral advection cannot be neglected. While the physical state can be satisfactorily estimated at these short time scales, the accurate estimation of the biological state in coastal regions still appears as rather elusive.     

The impact of a cement company’s CSR programmes on the lifestyles of a rural community: a case study in the Ring 1 area in Tuban,East Java,Indonesia

The studies about patterns and impacts of a company’s corporate social responsibility (CSR) programmes on the local communities have been conducted in a number of developed countries. The similar studies, however, were still rarely conducted in developing countries, particularly in Indonesia. This study aims at discussing the impact of the CSR programmes of a cement company on the lifestyles of a rural community in six villages in Tuban district of East Java Province in Indonesia. The study was conducted from January to September 2015, using qualitative data collection and analysis. This study found that the presence of the cement company has made both positive and negative impacts to the rural community. For the positive impacts, we can see the development of infrastructure that makes the villages become more representative; the emergence of new business opportunities, such as food stalls and boarding houses; and the improvement of the quality of human resources through free health care, education, and religious activities. The supports from the cement company, however, have not been distributed equally among the villagers. In addition, we can also see the following negative impacts: the increase of social tense among the villagers due to the tight competition to obtain work in the cement company; the uneasy relation between the local people and the immigrants who work in the cement company; the decrease in the number of people working in agricultural sectors, as most of them have moved or wish to move to the cement company.     

Random binary matrices in biogeographical ecology—Instituting a good neighbor policy

Binary matrices originating from presence/absence data on species (rows) distributed over sites (columns) have been a subject of much controversy in ecological biogeography. Under the null hypothesis that every matrix is equally likely, the distributions of some test statistics measuring co-occurrences between species are sought, conditional on the row and column totals being fixed at the values observed for some particular matrix. Many ad hoc methods have been proposed in the literature, but at least some of them do not provide uniform random samples of matrices. In particular, some swap algorithms have not accounted for the number of neighbors each matrix has in the universe of matrices with a set of fixed row and column sums. We provide a Monte-Carlo method using random walks on graphs that gives correct estimates for the distributions of statistics. We exemplify its use with one statistic.     

Biogeochemical transfer and dynamics of iodine in a soil–plant system

Radioactive iodide (¹²⁵I) is used as a tracer to investigate the fate and transport of iodine in soil under various leaching conditions as well as the dynamic transfer in a soil–plant (Chinese cabbage) system. Results show that both soils (the paddy soil and the sandy soil) exhibit strong retention capability, with the paddy soil being slightly stronger. Most iodine is retained by soils, especially in the top 10 cm, and the highest concentration occurs at the top most section of the soil columns. Leaching with 1–2 pore volume water does not change this pattern of vertical distributions. Early breakthrough and long tailing are two features observed in the leaching experiments. Because of the relatively low peak concentration, the early breakthrough is really not an environmental concern of contamination to groundwater. The long tailing implies that the retained iodine is undergoing slow but steady release and the soils can provide a low but stable level of mobile iodine after a short period. The enrichment factors of ¹²⁵I in different plant tissues are ranked as: root > stem > petiole > leaf, and the ¹²⁵I distribution in the young leaves is obviously higher than that in the old ones. The concentrations of ¹²⁵I in soil and Chinese cabbage can be simulated with a dual-chamber model very well. The biogeochemical behaviors of iodine in the soil-cabbage system show that cultivating iodized cabbage is an environmentally friendly and effective technique to eliminate iodine deficiency disorders (IDD). Planting vegetables such as cabbage on the ¹²⁹I-contaminated soil could be a good remediation technique worthy of consideration.     

Chelipeds are the real weapon: cheliped size is a more effective determinant than body size in male–male competition for mates in a hermit crab

To understand the evolution of weapons, we must understand both their functions and relative importance compared to body size in determining fighting success. Many decapod crustaceans develop disproportionately large chelipeds for their body size and use them as a weapon in agonistic interaction. There are, however, examples where weapons are merely signals of resource holding potential (RHP) and the RHP is actually determined by body size. We investigated the function and relative efficacy of body size and major cheliped size in male–male contests for females in the hermit crab Diogenes nitidimanus. Contests over females took two forms: (1) males preemptively guarded females and opponents did not fight with the guarding male. Cheliped size contributed significantly to the settlement of these contests and probably functioned as a visual signal for the opponents. (2) Guarding males engaged in physical combat with an opponent. In these cases, both body and cheliped sizes affected contest outcomes. The effect size for cheliped size was as strong, or stronger, than that for body size. These results suggest that large chelipeds have evolved as a true weapon and are effective in escalated fights for resources. Therefore they are also efficient visual signals for settling contests with only display. Our results are a rare example that clearly demonstrate that weapons are a more important determinant of fights than body size when both body and weapon size affect resource acquisition.