Evaluating Completeness of Species Lists for Conservation and Macroecology: a Case Study of Mexican Land Birds

Abstract: Studies of species diversity, macroecology, and conservation are usually based on lists of species, but lists found in the scientific literature vary in completeness. The use of such data sets can produce misleading results, making it necessary to test species lists for completeness before undertaking an analysis. Species-richness estimators are useful for judging the completeness of species lists but have limitations. To add rigor to studies based on species lists, we propose that species lists should test for " omnipresent" taxa—species, genera, and families that occur throughout the region concerned—and for a minimum number of species and families. As a case study, we compared species assemblages in diverse habitats in Mexico and found that seven families and two genera of land birds are omnipresent in mainland Mexico (excluding treeless areas) and that the most depauperate assemblage known contains 35 species from 21 families. We concluded that a list of land birds from Mexico that lacks any of these omnipresent taxa or that contains fewer than 35 species or 21 families is incomplete. Similar analyses can be done for other taxa and other parts of the world. Tests for omnipresent taxa and for a minimum number of species and families can be used in combination with other existing criteria, such as species-richness functions, to better evaluate the completeness of species lists. Realistic results may be produced in macroecological and conservation studies only if they are based on reasonably complete species lists.     

A Regional Perspective on the Diversity and Conservation of Tropical Andean Fishes

Abstract: The tropical Andes harbor an extraordinarily varied concentration of species in a landscape under increasing pressure from human activities. Conservation of the region's native plants and animals has received considerable international attention, but the focus has been on terrestrial biota. The conservation of freshwater fauna, particularly the conservation of fishes, has not been emphasized. Tropical Andean fishes are among the most understudied vertebrates in the world. We estimate that between 400 and 600 fish species inhabit the diverse aquatic environments in the region. Nearly 40% of these species are endemic. Tropical Andean fishes are vulnerable to ongoing environmental changes related to deforestation, water withdrawals, water pollution, species introductions, and hydropower development. Additionally, their distributions and population dynamics may be affected by hydrologic alterations and warmer water temperatures associated with projected climate change. Presently, at least three species are considered extinct, some populations are endangered, and some species are likely to decline or disappear. The long‐term persistence of tropical Andean fishes will depend on greater consideration of freshwater systems in regional conservation initiatives.     

Sustainable Use of the Tropical Rain Forest: Evidence from the Avifauna in a Shifting-Cultivation Habitat Mosaic in the Colombian Amazon

We carried out a one-year study of the avifauna along a regeneration gradient created by indigenous shifting cultivation in the Colombian Amazon rain forest. Regenerating one-hectare crop fields, from 1 to 17 years after abandonment, and undisturbed understory sites were compared in a sample effort of 4323 net hours. We made 878 captures of 103 species belonging to 11 trophic groups. Differences in species richness and number of individuals captured between regenerating areas and primary forest were low. A comparison of similarity indices among the sites for each habitat type showed no consistent differences, suggesting similar levels of local heterogeneity. Similarity indices calculated between sites of different-aged habitats, however, showed that young secondary growth at less than 10 years of abandonment was least similar to other sites, whereas old secondary growth between 13 to 17 years of abandonment, and forest understories, had the most similar avifauna. Two trophic groups were absent from the samples of the forest interior, and the abundance of the other nine varied among sites of regeneration. We conclude that slash and burn agriculture represents a high-intensity, small-magnitude disturbance to the forest avifauna. Large changes occur when the crop field is established and last until about 10 years after abandonment. Our data suggest that abandoned crop fields older than this age mimic the natural patch dynamics of the forest, making this type of agriculture an example of a potentially sustainable use of tropical forests, at least from the standpoint of its impact on bird communities.     

Behavioral Assumptions of Conservation Policy: Conserving Oak Habitat on Family-Forest Land in the Willamette Valley, Oregon

Abstract:  Designing policies that harness the motivations of landowners is essential for conserving threatened habitats on private lands. Our goal was to understand how to apply ethnographic information about family-forest owners to the design of conservation policy for Oregon white oak (Quercus garryana) in the Willamette Valley, Oregon (U.S.A.). We examined owners' knowledge, beliefs, values, and socioeconomic contexts through in-depth individual and focus-group interviews to understand their motivations to conserve oak. We then used Schneider and Ingram's (1990) policy analysis framework to compare owners' motivations to the logic of policy. Owners had complex motivations for conserving oak. Despite this complexity, all 5 categories of policy that Schneider and Ingram describe hold promise. Policies that use symbolism to inspire behavior and policies that build capacity can harness owners' stewardship ethics and moral obligations. Policies that offer tangible rewards can build on owners' utilitarian motives. Policies that permit and prohibit behavior can tap owners' concerns about rule violations. Policies that promote voluntary, collaborative efforts can accommodate owners' need for autonomy and flexibility.     

Accelerating Forest Succession in a Fragmented Landscape: The Role of Birds and Perches

Previous research suggests that in highly fragmented forest landscapes ecological succession can be arrested by lack of seeds, but that seed deposition abundance and diversity of bird-dispersed plants can be enhanced by bird-attracting structures such as snags. Consequently, bird perches remain a potential tool for accelerating ecological succession and reforesting disturbed land. Consequently, in order to determine the effectiveness of bird perches in reclaiming forested landscapes, seed dispersal, seedbank storage, and recruitment of bird-dispersed plants was studied on a central Florida mined site with clay-rich soil undergoing primary succession over a seven-year period. Data collection included 20 continuous months of seed dispersal data, an analysis of the total and germinable seedbanks, and plant recruitment at one and two years after a fire destroyed perches and burnt vegetation. Seed dispersal to perches reached a peak seedfall by weight in August, which was attributable to nonmigratory birds. Myrica cerifera, the most abundant species dispersed to the sites, was the only species dispersed during the winter and spring months, and it may be a keystone species for the frugivorous bird guild in central Florida. Seedfall beneath perches had a higher diversity of seed genera, and seed numbers (340 seeds m⁻² yr⁻¹) were 150 times greater than in sites without perches. Seeds of bird-dispersed plants in the seedbank under perches numbered 77 ± 33 (m⁻²) in total and 17 ± 5 for the viable seedbank. The population density of bird-dispersed plants was 1.4 and 2.0 plants m⁻² at one and two years afler the fire. Less than 0.06% of the dispersed seeds survived to become seedlings. Species composition shifted from seedfall to seedlings, with small-seeded, early-successional (r-selected) shrubs and herbs becoming relatively more common than the desired large-seeded, late-successional (K-selected) tree species. Perches attracted birds and associated seeds, but the physically harsh conditions created by primary succession and/or high predation on seeds appeared to reduce the success of the desired late-successional plant species. Nonetheless, there was a higher abundance and diversity of bird-dispersed plants under perches, suggesting that perch structures have a limited ability to enhance plant diversity under conditions of primary succession.     

Effect of Forest Fragmentation on Genetic Diversity and Mating System in a Tropical Tree, Pithecellobium elegans

Genetic diversity, population differentiation, and temporal variation in outcrossing rates were examined for Pithecellobium elegans , a Neotropical rain forest canopy tree. Several forest fragments and a large reserve (1500 ha) were compared for several population genetic parameters. For eight populations sampled on the Atlantic coastal plain of Costa Rica, allozyme heterozygosity (0.13), polymorphism (35%), and effective number of alleles (1.24) were similar to values reported for other tropical tree species that occur at similar densities of less than one individual per hectare. These measures of genetic variation were lowest in populations of the smallest size, farthest from the reserve, and more isolated from other populations. Differentiation among samples collected in small forest fragments and the reserve population accounted for 10% of the total genetic variation observed. There was a positive relationship between the level of differentiation of populations from the reserve population and their distance from the reserve. Though predominantly an annually flowering species, the number of trees in flower at any one time varied from 80% of observed trees to only 6%. Outcrossing rates did not differ for two episodes in which the proportions of flowering trees were 33% and 80%. But periods of low density of flowering adults resulted in poor seed crops or failure to set fruit for many individuals. Population size at many sites will be effectively decreased because of the variation in flowering. Fragmentation of what was once a large, continuous forested area is resulting in genetic erosion of small, isolated populations of Pithecellobium elegans .     

Negative Effects of Habitat Loss on Survival of Migrant Warblers in a Forest Mosaic

Abstract: Habitat loss and fragmentation in forested landscapes often negatively affect animal abundance; however, whether these factors also affect fitness is not well known. We hypothesized that observed decreases in bird occurrence and abundance in landscapes with harvested forests are associated with reduced apparent survival of adults. We defined apparent survival as an estimate of survival that accounts for an imperfect resighting probability, but not permanent emigration (i.e., dispersal). We examined the association between spatially extensive habitat loss and apparent survival of males of 2 Neotropical migrant species, Blackburnian Warbler (Dendroica fusca) and Black‐Throated Green Warbler (D. virens), over 7 years in the Greater Fundy Ecosystem, New Brunswick, Canada. We estimated apparent survival among and within breeding seasons. We quantified amount of habitat in the context of individual species. In this landscape, boundaries between land‐cover types are gradual rather than clearly identifiable and abrupt. Estimated apparent within‐season survival of both species decreased as a function of amount of habitat within a 2000‐m radius; survival was approximately 12 times (95% CI 3.43–14) greater in landscapes with 85% habitat than in landscapes with 10% habitat. Apparent annual survival also decreased as a function of amount of habitat within a 100‐m radius. Over the range of habitat amount, apparent annual survival decreased 15% (95% CI 7–29%) as the amount of habitat decreased. Our results suggest that reduced species occurrence in landscapes with low proportions of habitat is due partly to lower apparent survival at these sites. This mechanism operates both directly (i.e., via effects on mortality or dispersal during breeding) and possibly through indirect effects during the nonbreeding season. Habitat loss was associated not only with a lower number of individuals, but also with lower survival of those individuals.     

Effects of Habitat Fragmentation on Bird Species in a Relict Temperate Forest in Semiarid Chile

Abstract: We analyzed the structure and composition of a bird assemblage in a fragmented relict temperate forest located in northcentral Chile ( Fray Jorge National Park). In terms of species composition, the bird assemblage we found in Fray Jorge was more similar to southern temperate forest sites, located more than 1200 km south of Fray Jorge, than to localities found in nearby scrub habitats. The relict character and long-term isolation of the Fray Jorge forest provides a natural experiment with which to establish the potential long-term effects of fragmentation and isolation on southern Chilean temperate forests. Between May 1996 and March 1997, we conducted seasonal surveys of birds in six forest fragments, ranging in size from 0.5 to 22.5 ha, at Fray Jorge. The number of bird species at each forest fragment was positively correlated with fragment area during all seasons. The relict forest system had a steeper species-area slope than that reported for similar temperate-forest bird assemblages in forest fragments within Chiloé Island and for islands across the Chiloé Archipelago in southern Chile. In this regard, this bird fauna resembled a depauperate oceanic archipelago. This difference in area effects is likely a consequence of the minimization of rescue effects because of the absence of large source forest areas nearby and the long-term isolation of the system. In addition, the distribution of species among forest fragments in Fray Jorge was not random, showing a nested subset pattern. Thus, some species occur across all fragments, regardless of their area, and therefore are less affected by habitat fragmentation and less prone to local extinction. These results suggest that, for south-temperate forest birds, large fragments (or reserves) should afford better protection against extinction than small forest patches.     

A Study of Plant Species Extinction in Singapore: Lessons for the Conservation of Tropical Biodiversity

The native vascular plant flora of the Republic of Singapore has suffered the extinction of 594 out of a total 2277 species. These represent local, not global, species extinctions. Coastal habitats, including mangroves, have lost 39% of their species, while inland forests have last 29%. Epiphytic species (62% loss) appear particularly prone to extinction, which is reflected in a similar disposition exhibited by the Orchidaceae. Deforestation and disturbance have been the main cause of plant species extinction in Singapore. The rich mangrove epiphyte flora has been totally exterminated, and a number of tree species are reduced to populations of a few mature individuals. Many more species continue to survive than the species-area relationship would predict given the 99.8% loss of primary forest. This is interpreted as a result of the failure of equilibrium to be achieved yet in the remnant forest fragments, even after more than a century of isolation. Singapore's secondary forests appear to accrete plant diversity very slowly, even if contiguous with primary forest areas. We conclude that remnant fragments of primary tropical forest, even of very small size, can play a major role in the conservation of tropical biodiversity. The patterns of extinction observed in Singapore indicate that coastal and estuarine sites are in greatest demand for development and therefore must be given high priority for conservation despite their somewhat lower biodiversity. Epiphyte and orchid diversity appear to be very good indicators of the degree of disturbance suffered by a habitat in the humid tropics.     

Conservation in a Region of Political Instability: Bwindi Impenetrable Forest, Uganda

Abstract: Bwindi Impenetrable is the most important forest in Uganda for conservation of biodiversity. It contains over half the world's mountain gorillas. It is surrounded by densely populated agricultural land and lies within a region of political instability. Gazetted as a forest reserve in 1932, little forest now remains outside its boundaries. Transformation of nearby communal swampland to farmland, much owned by a few individuals, shows the probable fate of Bwindi if it had not been declared a protected area. Widespread illegal logging and other activities were among reasons why the status of the forest was raised to national park in 1991. This resulted in local resentment, fed by inadequate consultation and concern about the local people's loss of access to resources. Fires were set in the forest and threats made against the gorillas. Three schemes to provide benefits from the existence of the forest to communities and involve them in park management were then instituted: agreements allowing controlled harvesting of resources in the park, receipt of some revenue from tourism, and establishment of a trust fund partly for community development. Tension between people and park has been reduced. This case demonstrates the importance of protected areas and community involvement in such circumstances. Community support is especially critical, as here, when resources available to park managers are limited and political instability endemic.     

Using Genetic Profiles of African Forest Elephants to Infer Population Structure,Movements, and Habitat Use in a Conservation and Development Landscape in Gabon

Conservation of wide‐ranging species, such as the African forest elephant (Loxodonta cyclotis), depends on fully protected areas and multiple‐use areas (MUA) that provide habitat connectivity. In the Gamba Complex of Protected Areas in Gabon, which includes 2 national parks separated by a MUA containing energy and forestry concessions, we studied forest elephants to evaluate the importance of the MUA to wide‐ranging species. We extracted DNA from elephant dung samples and used genetic information to identify over 500 individuals in the MUA and the parks. We then examined patterns of nuclear microsatellites and mitochondrial control‐region sequences to infer population structure, movement patterns, and habitat use by age and sex. Population structure was weak but significant, and differentiation was more pronounced during the wet season. Within the MUA, males were more strongly associated with open habitats, such as wetlands and savannas, than females during the dry season. Many of the movements detected within and between seasons involved the wetlands and bordering lagoons. Our results suggest that the MUA provides year‐round habitat for some elephants and additional habitat for others whose primary range is in the parks. With the continuing loss of roadless wilderness areas in Central Africa, well‐managed MUAs will likely be important to the conservation of wide‐ranging species. Utilización de Perfiles Genéticos de Elefantes Africanos para Inferir su Estructura Poblacional, Movimientos y Uso del Hábitat en un Paisaje con Conservación y Desarrollo en Gabón Resumenfgs     

Effects of an Exotic Plant Invasion on Native Understory Plants in a Tropical Dry Forest

Abstract: The dry forests of southern India, which are endangered tropical ecosystems and among the world's most important tiger (Panthera tigris) habitats, are extensively invaded by exotic plants. Yet, experimental studies exploring the impacts of these invasions on native plants in these forests are scarce. Consequently, little is known about associated implications for the long‐term conservation of tigers and other biodiversity in these habitats. I studied the impacts of the exotic plant Lantana camara on understory vegetation in a dry‐forest tiger habitat in southern India. I compared the richness, composition, and abundance of tree seedlings, herbs, and shrubs and the abundance of grass among plots in which Lantana was cleared or left standing. These plots were distributed across two blocks—livestock free and livestock grazed. Removal of Lantana had an immediate positive effect on herb–shrub richness in the livestock‐free block, but had no effect on that of tree seedlings in either livestock block. Tree‐seedling and herb–shrub composition differed significantly between Lantana treatment and livestock block, and Lantana removal significantly decreased survival of tree seedlings. Nevertheless, the absence of trees, in any stage between seedling and adult, indicates that Lantana may stall tree regeneration. Lantana removal decreased the abundance of all understory strata, probably because forage plants beneath Lantana are less accessible to herbivores, and plants in Lantana‐free open plots experienced greater herbivory. Reduced access to forage in invaded habitats could negatively affect ungulate populations and ultimately compromise the ability of these forests to sustain prey‐dependent large carnivores. Additional research focused on understanding and mitigating threats posed by exotic plants may be crucial to the long‐term protection of these forests as viable tiger habitats.