Aerobic heterotrophic bacterial diversity in sediments of Rajakkamangalam estuary, south west coast of India

The abundance of aerobic heterotrophic bacterial population in the sediment sample of six experimental stations (S1 to S6) at Rajakkamangalam estuary was studied for a period of one year from March, 1998 to February, 1999. The important bacterial genera encountered were Pseudomonas, Bacillus, Vibrio, Escherichia, Micrococcus, Enterobacter, Salmonella, Aeromonas, Shigella, Klebsiella, Proteus, Alkaligenes, Staphylococcus, Citrobacter and Flavobacterium. The bacterial population based on numerical counts showed wide fluctuations in their distribution at different stations. Among the bacterial genera Pseuaomonas was found to be the dominant genus during the experimental period. The qualitative and quantitative distribution of microflora in the sediment samples are discussed.     

Antimicrobial activity of tissue and associated bacteria from benthic sea anemone Stichodactyla haddoni against microbial pathogens

Associated bacteria from Stichodactyla haddoni are found maximum in tentacle tissues than the body tissue. There are eight associated bacterial species viz., Alcaligenes sp, Corynebacterium sp, Aeromonas sp, Sporosarcina sp, Renibacterium sp, Camobacterium sp1, Camobacterium sp2 and Salinococcus sp were recorded. The culture extracts from the associated bacterial species showed sensitivity against human bacterial and fungalpathogens. However, the hexane tissue extract of sea anemone showed maximum sensitivity (24 mm dia.) against the fish bacterial pathogen Aeromonas hydrophila than the other chosen pathogens. Comparatively the tissue extracts showed promising antimicrobial sensitivity than the cell free extracts of associated bacteria, and hence, the tissue samples from the sea anemone Stichodactyla haddoni is recommended for further exploration of novel antimicrobial drugs than the associated bacteria.     

Diversity of root associated microorganisms of selected medicinal plants and influence of rhizomicroorganisms on the antimicrobial property of Coriandrum sativum

The total heterotrophic bacteria, actinomycetes and fungus were enumerated from the rhizosphere and non-rhizosphere soil of 50 selected locally available medicinal plants in and around Bharathiar University. In all the plants, population of microorganism were higher in the rhizosphere soil than in the non rhizosphere soil. Among the microorganisms, bacterial population was higher in number followed by fungus and actinomycetes. Of the medicinal plants, the maximum rhizosphere effect was observed in Annona squamosa and the minimum effect was seen in Eclipta alba and Cassia auriculata. Among the bacteria the dominant species was Bacillus followed by Pseudomonas, Enterobacter, Corynebacterium, Micrococcus and Serratia. The Streptomyces species was found to be dominant followed by Deuteromycetes and Frankia among the actinomycetes. Among the fungal isolates Rhizopus was found to be higher in number followed by Aspergillus, Penicillium, Mucor and Fusarium. About 70.96% of the bacterial isolates were found to be nitrate reducers and 90.60% of the bacteria solubilised phosphate. The rhizosphere bacterial isolates were also capable of hydrolyzing starch, cellulose, casein, urea and gelatin. The isolates of bacteria, actinomycetes and fungus were also able to produce phytohormone Indole-3-acetic acid (IAA). The maximum IAA production was recorded by Fusarium sp (5.8 mg/l). The rhizosphere bacterial isolates showed resistance to 14 commercially used antibiotics. In an attempt to check the influence of these plant growth promoting microorganisms on the antimicrobial property of Coriandrum sativum against Escherichia coli MTCC-443 and Aeromonas hydrophila MTCC-646, the results observed was not encouraging since the inoculants did not influence the antibacterial property. However extensive and in depth study is required to find out the influence of rhizomicroorganisms on the antibacterial property of medicinal plants. The other results clearly indicated that the rhizosphere microorganisms could be exploited for its innumerable properties and active metabolites.     

不同补给水源的城市人工湖中异养菌耐药性及耐药菌种属分布研究

为了阐明不同补给水源的城市人工湖中异养菌耐药状况和耐药菌种属分布特征,选取分别以地表水和再生水为补水来源的XQ湖和FQ湖为代表进行研究。从2018年4—11月逐月采集水样,考察了各水样中对氨苄西林(AMP)、磺胺甲恶唑(SMZ)和四环素(TET)这3种不同种类抗生素具有耐药性的异养菌含量,并对分离菌株的耐药表型、耐药菌株的种属分布以及水质理化指标进行了分析。结果表明,2处人工湖中的AMP耐药菌和SMZ耐药菌含量约为10~2～10~4CFU·(100 m L)~(-1),而TET耐药菌含量则约10~1～10~3CFU·(100 m L)~(-1)。分离出的84株耐药菌归属于19个种,其中蜡状芽孢杆菌、大肠埃希氏菌、维氏气单胞菌、豚鼠气单胞菌和鸟氨酸拉乌尔菌为2个湖共有耐药菌。71.4%的耐药菌都是对AMP单一耐药,以蜡状芽孢杆菌为主。由于具有固有耐药性的细菌在分离出的耐药菌中占比很低,获得性耐药很可能在城市人工湖中异养菌耐药性的发展上发挥了主要贡献作用。地表水补水的XQ湖和再生水补水的FQ湖在总异养菌含量、耐药菌含量和检出率上均无显著差异。分离来源对16株耐药性气单胞菌的聚类无明显影响。     

High recovery of culturable bacteria from the surfaces of marine algae

The culturability of heterotrophic marine bacteria obtained from the surfaces of two species of marine algae (Lobophora variegata andHalimeda copiosa) was assessed by comparing total DAPI-stained cell counts to colony-forming bacterial counts on two agar media. The colony-forming bacterial counts on a low-nutrient medium (LN) consisting of seawater and agar were significantly greater for both algal species than counts obtained on a high-nutrient medium (HN) similar in composition to that typically used for the isolation of heterotrophic marine bacteria. On average, 14 and 58%, respectively, of the total bacteria fromL. variegata andH. copiosa were culturable on LN. These recovery rates far exceed those typically reported for marine bacteria. Of 119 LN strains obtained in pure culture, 55% failed to grow on HN. The yeast extract component of HN (1.5 gl^-1) was responsible for the majority of the observed inhibition, suggesting that this nutrient can be highly toxic to marine bacteria. Eighty-nine percent of the strains inhibited by HN were capable of growth when the nutrients in this medium were diluted by a factor of 100 with seawater. Of 66 epiphytic strains, 30 (45%) initially inhibited by HN showed the ability to adapt to this medium after a period of laboratory handling. The initial inability of low-nutrient-adapted bacteria to grow on high-nutrient media may be due to nutrient shock. The results presented here indicate that the culturability of specific populations of marine bacteria can be dramatically improved by the use of low-nutrient media. Further, the importance of developing new medium formulations that eliminate traditional nutrients, some of which are clearly toxic to bacteria, is demonstrated.     

Physico-chemical and microbial characteristics of the coral reef environment of the Gulf of Mannar marine biosphere reserve, India

Investigation on physico-chemical parameters and bacteial characteristics of the coral reef environs of the Gulf of Mannar biosphere reserve was studied. The study found the influence of different physico-chemical parameters on one another and also on the distribution of the total heterotrophic bacteria (THB) in the coral reef areas. Nutrients exhibited considerable seasonal and spatial variations with influence on the bacterial population. Coral reef areas recorded higher bacterial population density both in water (3.5 to 18 x 10(5) CFU ml(-1)) and sediment (1 to 14 x 10(7) CFU g(-1)) samples than the non coral reef areas (3.4 to 10.5 x 10(4) CFU ml(-1) in water and 0.9 to 7 x 10(6) CFU g(-1)). The study also found the dominance of gram negative groups at all the three stations (64.73, 63,5 and 72.59%) with Pseudomonas contributing maximum number of strains in all the samples. In addition Vibrio, Aeromonas, Flavobacterium, Cytophaga, Enterobacter and Alcaligenes were also recorded. The gram positive group was represented by Bacillus, Micrococcus, Arthrobacter and Corynebacterium. The genetic composition of THB isolated from the coral mucus revealed the presence of Vibrio and Micrococcus in all the coral mucus.     

Assessing reef fish assemblage structure: how do different stereo-video techniques compare?

Measures of fish abundance, assemblage composition and length were compared when sampled by baited remote underwater stereo-video (stereo BRUV) and diver-operated stereo-video transects (stereo DOV) at the Houtman Abrolhos Islands and Ningaloo Reef. Species richness counts were 40% higher on stereo BRUV than stereo DOV. Stereo BRUVs also recorded a greater number of large-bodied targeted species in higher abundance than stereo DOV (e.g. Lethrinus nebulosus, Plectropomus leopardus) at the Houtman Abrolhos and at Ningaloo Reef. Many non-targeted species were also recorded in greater abundances on stereo BRUV than stereo DOV (e.g. Coris auricularis, Gymnothorax spp). Stereo DOV transects recorded a greater abundance of some small-bodied Pomacentridae, Labridae and Scaridae species than did stereo BRUV, particularly at Ningaloo Reef. This study demonstrates that choice of sampling technique for surveys of reef fish can lead to very different biological interpretations of fish assemblage structure.     

Role of bacteria in the epizootic ulcerative syndrome (EUS) of fishes

Bacteriological examination of certain water bodies and fishes carrying EUS was carried out. As a whole, 17 species of bacteria were isolated from the investigated water bodies and EUS affected fishes. The species of bacteria isolated from fishes are common to those isolated from water. Experimental infection trials conducted suggested that Aeromonas hydrophila in association with Pseudomonas fluorescens, may be playing the role of primary aetiological agent in producing EUS in fishes.     

不同填料对人工湿地模拟柱中指示菌的去除

为研究不同填料对指示菌的去除效果,选取沸石、无烟煤、页岩、蛭石、陶瓷滤料、砾石、钢渣、生物陶粒8种填料,进行垂直流人工湿地模拟柱净化污水试验。结果表明,8种填料中对3种指示菌(异养细菌、大肠菌群和粪链球菌)去除率较高的为钢渣(99.9%)和无烟煤(95.9%),推测主要是因为其出水分别呈碱性和酸性造成。除钢渣和无烟煤外,去除率较高的为沸石和蛭石,去除率较低的为陶瓷滤料和生物陶粒。相关分析结果表明6种填料(不包括钢渣和无烟煤)对指示菌去除率与填料的渗透系数间存在负相关关系,推测它们主要是通过过滤吸附的机制去除指示菌。     

Studies of some biochemical changes in the tissues of Catla catla (Hamilton), Labeo rohita (Hamilton) and Cirrhinus mrigala (Hamilton) exposed to NH3-N,NO2-N and NO3-N

Biochemical changes, total proteins, glycogen, aspartate and alanine (AAT and ALAT) amino transferases were studied with exposure of sublethal concentrations of NH3-N, NO2-N and NO3-N to the freshwater fish Catla catla (Hamilton), Labeo rohita (Hamilton) and Cirrhinus mrigala (Hamilton). Depletion in the food reserves and enzyme activity was observed in all the three fish species exposed to these toxicants. Hence, the concentrations of NH3, NO2 and NO3 in water need to be monitored in water quality in aquaculture practices.     

不同C/N值下亚硝酸盐氧化菌和异养菌混合体系的微生物多样性

采用PCR-RFLP技术研究了不同C/N比下亚硝酸盐氧化菌及异养菌混合体系的微牛物多样性,并探讨了微生物菌群结构与其功能(硝化件能)的关系.C/N=0时,混合体系主要由自养菌和寡营养菌(85.1%)组成,包括亚硝酸盐氧化菌(NOB)、拟杆菌门、α-变形菌纲、浮霉菌门和绿色非硫细菌中的一些菌株.C/N=0.44时,混合体系中的自养菌减少,异养菌(主要是γ-变形菌纲的成员)大量出现.C/N=8.82时,γ-变形菌纲的菌株尤其是反硝化菌Pseudomonas sp.占主导(93.8%),与此同时,随着C/N升高,该混合体系的硝化性能也由专一的亚硝酸盐氧化过程转变为同时硝化反硝化过程.微生物菌群结构的转变较好地解释了其硝化性能的改变.本研究揭示了微生物菌群结构与其功能的内在联系,同时表明PCR-RFLP技术与化学分析相结合是研究微生物菌群结构与功能的有力工具.图3表2参13     

Insect fauna associated with sugarcane plantations in Sri Lanka

A survey conducted over 13 years (1986-1999) in sugarcane plantations in Sri Lanka to identify insects associated with sugarcane recorded a total of 103 insect species comprising Coleoptera (31 spp.), Dictyoptera (2 spp.), Diptera (5 spp.), 12 Heteroptera (12 spp.), Homoptera (18 spp.), Hymenoptera (7 spp.), Isoptera (3 spp.), Lepidoptera (13 spp.), Orthoptera (9 spp.), and one species each of Thysanoptera, Nuroptera and Trichoptera. Among them were forty-six species of sugarcane pests. In addition, 27 species of natural enemies of sugarcane pests belonging to the orders Coleoptera, Diptera and Hymenoptera were identified Epiricania melanoleuca (Fletcher) introduced into Sri Lanka from Pakistan in 1991 for the control of the sugarcane planthopper was also recorded. Five new pest species previously not recorded from sugarcane in Sri Lanka have been identified.     

Role of water hyacinth in the health of a tropical urban lake

The paper assesses health of the tropical urban Robertson Lake, Jabalpur which receives domestic sewage from neighboring human inhabitation and is infested with water hyacinth. Peak density of this macrophyte was 12.5 t dw ha(-1). The water-column was anaerobic (0.6 to 1.9 mg O2 L(-1)), neutral in pH, and enriched with inorganic carbon (23.5 to 37.1 mg L(-1)), NH4-N (0.48 to 2.96 mg L(-1)), and organic nitrogen and phosphorus. Density of heterotrophic bacteria was high (6.8 to 15x10(5) cfu ml(-1)) along with that of total coliforms and fecal bacteria. Species diversity of phytoplankton and submerged macrophytes was very low. Growing stands of water hyacinth could store up to 613 g C m(-2), 23.5 g N m(-2) and 5.5 g P m(-2) and released them during decomposition. The release of nutrients was 3-4 times faster than the uptake. Water hyacinth stabilized water quality and provided substantial support to bacterial density, which in turn contributed significantly to its growth and nutrient dynamics. Turnover of water hyacinth was only 70-80%, adding approximately 175 t humus in the lake. The results denote poor health of the lake, characterized by low species diversity, fast shallowing, dominance of detritus food--webs, and the water unsuitable for human consumption.     

Arsenite oxidation by <Emphasis Type="Italic">Alcaligenes</Emphasis> sp. strain RS-19 isolated from arsenic-contaminated mines in the Republic of Korea

Arsenite [As(III)]-oxidizing bacteria play important roles in reducing arsenic [As] toxicity and mobility in As-contaminated areas. As-resistant bacteria were isolated from the soils of two abandoned mines in the Republic of Korea. The isolated bacteria showed relatively high resistances to As(III) up to 26 mM. The PCR-based 16S rRNA analysis revealed that the isolated As-resistant bacteria were close relatives to Serratia marcescensa, Pseudomonas putida, Pantoea agglomerans, and Alcaligenes sp. Among the five As-resistant bacterial isolates, Alcaligenes sp. strain RS-19 showed the highest As(III)-oxidizing activity in batch tests, completely oxidizing 1 mM of As(III) to As(V) within 40 h during heterotrophic growth. This study suggests that the indigenous bacteria have evolved to retain the ability to resist toxic As in the As-contaminated environments and moreover to convert the species to a less toxic form [e.g., from As(III) to As(V)] and also contribute the biogeochemical cycling of As by being involved in speciation of As.     

Screening and bioassays for biologically-active substances from forty marine sponge species from San Diego,California, USA

Biologically-active substances were investigated from 35 demosponge species and 5 calcareous sponge species collected from intertidal or shallow subtidal habitats near San Diego, California, USA, from 1978 to 1980. Crude methanolic extracts of each species were tested for suppression of growth by bacteria (7 species) and a yeast. Antimicrobial activity was found in 26 Demospongiae and 2 Calcarea. Strong activity was found in 11 demosponges and, subsequently, 38 natural products with antimicrobial activity were isolated from 8 of these species (Aplysina fistularis, Dysidea amblia, Leiosella idia, Euryspongia sp., Toxadocia zumi, Axinella sp., Haliclona?cinerea and ?Pachychalina lunisimilis). Twenty-eight of these natural products (usually as pure compounds) were assayed for: (1) suppression of growth of marine fungi (3 spp.) and a red alga; (2) behavior modifications of invertebrate adults (4spp.); (3) toxicity to a goldfish; (4) inhibition of sexual reproduction of a brown alga; (5) inhibition of settlement and/or metamorphosis of late larvae or invertebrate juveniles (4spp.). Many of the natural products were also incorporated into pelleted fish food and tested for feeding-behavior modifications of fishes (5 spp.). Three of the compounds from Dysidea amblia were inactive in all tests. All other natural products were active in at least one assay, although none was active in all assays. The discussion relates the possession of biologically-active substances to the ecology of each sponge species; for example, sponges with antimicrobial substances are rarely overgrown.     

Occurrence and seasonal variation of bacterial indicators of faecal pollution along Thoothukudi Coast, Tamil Nadu

Theprevalence and seasonal variation of bacterial indicators of faecal pollution such as total coliform bacteria, faecal coliform bacteria, Escherichia coli and faecal streptococci were investigated in samples of water and beach sand from the four fish landing centres of Thoothukudi. Further the samples were screened for Salmonella to study the reliability of faecal indicator bacteria as an index of human pathogenic bacteria. Total coliform bacteria, faecal coliform bacteria and Escherichia coli were isolated from all four landing centres from undetectable to the maximum detectable level of over Most Probable Number 140 throughout the year with no obvious seasonal variation. Faecal streptococci were also detected in most samples. There was no discernable relationship between faecal indicators and physical parameters. The relationship between faecal indicators and Salmonella was not significant (p > 0.05). The results showed that the coastal waters along Thoothukudi is polluted and presents a potential risk to public for recreational and fishing activities.     

Isolation and characterisation of antibiotic producing microorganisms in composted Nigerian soil

Compost samples obtained from different locations within the premises of the university of Lagos were analysed to determine the presence and types of antibiotic-producing bacteria, fungi and actinomycetes using nutrient agar, potato Dextrose agar and starch casein nitrate agar respectively as culture media. A variety of bacteria were isolated and these included Staphylococcus aureus, B. subtilis, B. pumilis, B. lactesporus, B. megaterium, B. pulvifaciens, B. licheniformis, Streptococus spp., Corynebacterium spp. and E. coli. The fungal isolates encountered were Aspergillus niger, A. flarus, T. viridae, P. chrysogenum, P. pinofylum and Absida spp., while the following actinomycetes were identified: Norcadia spp., Micromonospora spp., Streptomyces scabies, S. reticuli and S. hygroscopicus. When these organisms were screened for antibiosis, the following species were found to be antibiotic producers: B. licheniformis, B. subtilis, Penicillium chrysogenum, Streptomyces reticuli, S. hygroscopicus and Micromonospora spp. The fungus Penicillium chrysogenum had the highest rate of antibiotic production with an inhibitory zone width of 17mm while Trichoderma viridae produced toxins lytic to other fungal hyphae.     

Prevalence of plasmid mediated pesticide resistant bacterial assemblages in crop fields

Three crop fields namely paddy sugarcane and tomato exposed to bavistin [Methyl (1H-benzimidazol-2-yl) carbomate], monocrotophos[Dimethyl(E)-1-methyl-2-(methyl-carbamoyl) vinyl phosphate] and kinado plus [(EZ)-2-chloro-3-dimethoxyphosphinoyloxy-X1, X1-diethylbut-2-enamide], respectively were chosen for the present investigation to know the bacterial population and degradation of pesticides. The chemical nature of the soil and water samples from the pesticide contaminated fields was analysed along with counting of the total heterotrophic bacteria (THB), Staphylococci and Enterococcci population. Mean calcium, phosphate and biological oxygen demand were maximum in tomato field water Field water recorded maximum phophate and silicate content, whereas, sugarcane field water elicited maximum dissolved oxygen content. On the other hand, available phosphate and exchangeable potassium were maximum is sugarcane field soil. Significant variations in the bacterial population were evident between the treatments in sugarcane field soil and tomato field water exposed to monocrotophos and kinado plus, respectively In addition, significant variations between THB, Staphlyococci and Enterococci population were also evinced in both the sugarcane andtomato fields. The dominant pesticide resistant bacteria, Staphylococcus aureus, Enterococcus faecalis and Pseudomonas aeuroginosa harboured plasmids and the resistant trait observed were found to be plasmid borne.     

Survival of faecal coliforms and hygiene risks in soils treated with municipal sewage sludges

An incubation experiment was conducted to monitor effect of sewage sludge application on changes in numbers of faecal coliforms in soils over time after sludge application and evaluate the hygiene risks. Soil faecal coliform counts were made after 1, 7, 14, 28, 56 and 84 days of incubation. The faecal coliform counts in the sludge-treated soils decreased substantially with time and were similar to those in the untreated controls after incubation for 56 days. Land application of air-dried sludges increased the hygiene risks due to the re-growth of faecal coliforms, and the counts of faecal coliforms in soil treated with air dried sludge from Suzhou (91% DM) were 50 times higher than in soils with fresh dewatered sludge from Suzhou (15% DM) after 7 days of incubation. The main factors affecting the changes in faecal coliform counts were sludge type and incubation time. Sludge type determined the faecal coliform counts and the ability of the faecal coliforms to re-establish, and indigenous microorganisms competed with the faecal coliforms for nutrients during the incubation process.     

Structure of and relationships within and between the littoral,rock-substrate fish communities off four islands in the Canarian Archipelago

A total of 577 visual surveys (each of 5 min in duration and 100 m² in area) were conducted throughout 1990 and 1991 at 32 locations off four Canary islands (i.e., Alegranza, Fuerteventura, Gran Canaria and Tenerife) with the objects of describing the coastal fish community, comparing the differences in the fish fauna within and between these islands, and determining the biotic and abiotic factors related to the structure of the fish communities. A total of 76 species were recorded; the most common were Abudefduf luridus, Canthigaster rostrata, Chromis limbatus, Sparisoma cretense and Thalassoma pavo (94.28, 86.48, 52.34, 73.31, and 94.10% frequency of occurrence, respectively). The abundance and average size of the commercially important species was greater in those locations where there was less fishing pressure. The stepwise linear regression models were capable of explaining only a low amount of variation in the dependent variables (i.e., number of species, number of individuals, average size and species diversity) of the fish community. The independent variables recorded were date, time of day, depth, slope of the substrate, substrate type, percentage of sand, percentage of algae, algal height, number of sea urchins (Diadema antillarum) and the individual islands. An ANOVA, using the islands only as independent variables, indicated that each island contributed significantly to the variation in the four dependent variables and there were significant differences among the islands. Detrended correspondence analysis (DCA) and a two-way indicator species analysis (TWINSPAN) determined associations between species and environmental attributes of the survey locations. The patterns in the TWINSPAN analysis indicated that localities had faunal resemblances based on the island off which where they were located.