池塘浮游生物优势种组成与DNA指纹的关系

研究中国地质大学(武汉)校区3个池塘7个样点浮游生物群落的优势种组成和DNA指纹多态性.利用15种随机引物分别扩增,其中7种引物获得多态性片段.电泳共得到47条带,谱带平均多态率为96.4%.根据Nei's遗传距离矩阵构建3个池塘7个样点的遗传关系聚类树.通过优势种群组成聚类分析比较探讨浮游生物优势物种组成和DNA指纹遗传关系聚类树结构的关系.结果表明,同一池塘样点的优势种组成和DNA指纹遗传多样性相似性较高;西区池塘样点的优势种组成和遗传关系最近,其次是东区池塘的3个样点,差别最大的是北区池塘的两个样点.其原因可能是生境的隔离和差异.提示尽管池塘浮游生物优势种组成与DNA指纹结构表示的遗传关系会存在较小差异,但是分析结果基本一致.因此,利用DNA指纹技术研究池塘浮游生物生态学是可行的.     

异质生境空心莲子草植物群落组成及物种多样性研究

研究草海湿地空心莲子草（Alternanthera philoxeroides）入侵对异质生境植物群落生活型、物种组成、重要值及物种多样性的影响,结果表明,①异质生境中群落生活型组成比例有差异,水生生境地面芽植物（H）∶隐芽植物（Cr）∶一年生植物（Th）为56∶38∶6;湿生生境为43∶36∶21。②异质生境中物种组成差异明显,水生生境试验样方包含9科13属16种,对照样方（无空心莲子草入侵）包含10科19属23种;湿生生境试验样方包含8科14属14种,对照样方有10科19属22种。空心莲子草入侵不同生境后群落内物种重要值变化及差异均较大,部分乡土物种在试验样方中减少甚至消失,水生生境和湿生生境群落中分别有30.44%、36.36%物种消失。③异质生境中空心莲子草重要值与物种多样性指数、生态优势度指数、均匀度指数均呈二项式函数关系;两种生境的多样性指数和均匀度指数均表现为随空心莲子草重要值先增加后减少,生态优势度指数均为先减少后增加,空心莲子草入侵对乡土植物群落物种多样性产生正向影响和负向影响,在群落中其重要值达25.8（水生生境）、18.9（湿生生境）时,是乡土植物多样性下降的临界点。     

晋西黄土区封禁流域植被群落组成及物种多样性变化

以晋西黄土区蔡家川封禁26年的小流域为研究对象,采用样线调查技术,对其植被群落特征进行了调查.结合1996年的调查资料,对6种生境类型在不同封育年限条件下群落的物种组成变化进行了对比分析,并运用物种多样性指数、均匀度指数以及生态优势度对调查区域群落物种多样性进行了分析.结果表明:随着封育年限的增加,乔木树种的比例有所上升,灌木的比例有所下降,群落中乔灌木物种更为均衡;研究区域群落整体上物种多样性指数、均匀度指数均有显著提高,生态优势度有所下降,群落朝着更为丰富、均匀、稳定的方向发展.     

鼎湖山20公顷森林样地单个物种对群落的构建

大型固定监测森林样地已成为研究森林群落组织机制的一个重要平台。群落里个体之间的相互作用对群落的构建有相当重要的作用。以往的研究主要针对于物种之间的相互作用,而用群落里单个物种与其它所有个体之间相互关系来解释群落构建的研究还很少。采用单个物种-面积关系(ISAR)这一指标对鼎湖山20 hm2样地和BCI 50 hm2样地数据分析,来研究不同样地单个物种是如何对森林群落进行构建的。结果显示,与BCI样地和Sinharaja样地不同,鼎湖山样地大树对周围其它个体的作用几乎是中性的;而对于小树(胸径小于10 cm)来说,鼎湖山样地和BCI样地一样,随着尺度的增加吸引型物种减少,而中性物种增加。说明了不同的群落在不同的发育阶段,单个物种对群落结构的构建有重要的作用不同,将来的研究应该结合群落其它方面的因素来分析群落内个体之间相互作用,例如从时间尺度的谱系和空间因素去分析。     

鼎湖山20公顷森林样地单个物种对群落的构建

大型固定监测森林样地已成为研究森林群落组织机制的一个重要平台。群落里个体之间的相互作用对群落的构建有相当重要的作用。以往的研究主要针对于物种之间的相互作用,而用群落里单个物种与其它所有个体之间相互关系来解释群落构建的研究还很少。采用单个物种-面积关系（ISAR）这一指标对鼎湖山20 hm2样地和BCI 50 hm2样地数据分析,来研究不同样地单个物种是如何对森林群落进行构建的。结果显示,与BCI样地和Sinharaja样地不同,鼎湖山样地大树对周围其它个体的作用几乎是中性的;而对于小树（胸径小于10 cm）来说,鼎湖山样地和BCI样地一样,随着尺度的增加＂吸引型＂物种减少,而＂中性＂物种增加。说明了不同的群落在不同的发育阶段,单个物种对群落结构的构建有重要的作用不同,将来的研究应该结合群落其它方面的因素来分析群落内个体之间相互作用,例如从时间尺度的谱系和空间因素去分析。     

府河水体及沉积物细菌群落结构分布特征及其影响因素

城市河流承接不同类型的废水导致水质恶化,影响河流生态系统.通过分析河流细菌群落结构变化,不仅可以判断河流污染特征,还将有助于河流污染治理与生态修复.笔者研究了府河夏季上下游水体和沉积物理化性质,并采用高通量测序法分析了细菌群落结构特征.结果 表明,府河上游水质化学需氧量(COD)、氨氮(NH3-N)和总磷(TP)浓度显著高于下游(P＜0.05),沉积物中重金属镉、锌和铅含量较高,均值分别为(0.44±0.03)、(182.17 ±0.34)和(35.76±0.20) mg· kg-1.府河沉积物细菌多样性及丰富度明显高于相应上覆水体,变形菌门(Proteobacteria)是水体和沉积物中的第一优势菌,水体中参与氮循环的蓝藻菌门(Cyanobacteria)的高丰度说明府河存在一定的富营养化,此外,可以分解有机物的放线菌门(Actinobacteria)在下游丰度高于上游;沉积物中具有致病作用的拟杆菌门(Bacteroidetes)在上游城市河段丰度较高.细菌群落空间异质性结果表明下游硝化细菌(nitrifying bacteria)和反硝化细菌(denitrifying bacteria)的丰度(分别为62.25％和31.29％)明显比上游高.水体细菌多样性和温度、pH、总有机碳有显著相关性(P＜0.05),冗余分析显示NH3-N、总氮(TN)、TP和pH对细菌群落结构影响较大;而pH、TN和重金属镉是影响下游沉积物细菌群落结构的主要环境因子.     

古田山国家自然保护区针阔叶混交林植物物种多样性特征

利用样方法进行野外群落调查.共调查了6个样地,每个样地大小为20m×20 m,研究古田山自然保护区针阔叶混交林植物物种多样性特征.结果表明:古田山针阔混交林的科、属、种组成多样性较高,植物种类丰富.组成复杂.群落的属种多样性>科属多样性>科种多样性.从灌木层、乔木层至草本层物种多样性依次递减,乔木层和灌木层的物种多样性指数明显大于草本层物种多样性指数.     

露天煤矿生态复垦区刺槐+油松混交林下草本植物组成及空间分布格局

以安太堡露天煤矿生态复垦区0.8 hm2刺槐+油松混交林样地为研究平台,基于样地内320个1 m×1 m草本样方的调查数据,对复垦17年后草本层的物种组成、基本数量特征和空间分布等进行研究.结果表明:样地内草本层物种组成丰富,共调查到44种植物,隶属于16科30属,其中禾本科和菊科为优势科,黄花蒿、披碱草和大籽蒿为优势种,初期种植种无芒雀麦等退化严重;重要值、多度和频度在各科和各种之间差值较大;优势科和优势种分布广泛,但物种分布呈现出明显的空间异质性.     

河流健康综合评价指数法的改进及其在昌江的应用

目前普遍采用的河流健康综合评价指数法中水生生物指标相对简单,不能准确度量复杂河流生态系统的健康状态.通过增加蜉蝣目、襀翅目和鞘翅目相对丰富度以及科级生物指数2项指标,改进水生生物指标中的二级指标,并采用改进前后的河流健康综合评价指数法对鄱阳湖人湖支流——昌江进行评价对比.结果表明,昌江总体健康状况较好,各样点均处于健康或亚健康状态;从河流上游至下游,昌江干流及主要支流东河健康状况明显下降,得分最低的3个样点都位于昌江于流,而健康样点大都接近源头;改进后的河流健康综合评价指数法可更好地区分昌江不同样点的水体健康状态.     

哀牢山西坡主要植被类型的特征与物种组成

研究了云南哀牢山西坡主要植被类型的物种组成和群落生态特征,结果如下: 1)物种多样性在低山季风常阔叶林中最高; 2)乔木径级在中山湿性常绿阔叶林中最大,而乔木密度则在山顶苔藓矮林最大; 3)当取样面积达1 500m2后,各植被类型物种增加速度变得缓和. 图 4表 3参 32     

Species dispersal rates alter diversity and ecosystem stability in pond metacommunities

Metacommunity theory suggests that relationships between diversity and ecosystem stability can be determined by the rate of species dispersal among local communities. The predicted relationships, however, may depend upon the relative strength of local environmental processes and disturbance. Here we evaluate the role of dispersal frequency and local predation perturbations in affecting patterns of diversity and stability in pond plankton metacommunities. Pond metacommunities were composed of three mesocosm communities: one of the three communities maintained constant "press" predation from a selective predator, bluegill sunfish (Lepomis macrochirus); the second community maintained "press" conditions without predation; and the third community experienced recurrent "pulsed" predation from bluegill sunfish. The triads of pond communities were connected at either no, low (0.7%/d), or high (20%/d) planktonic dispersal. Richness and composition of zooplankton and stability of plankton biomass and ecosystem productivity were measured at local and regional spatial scales. Dispersal significantly affected diversity such that local and regional biotas at the low dispersal rate maintained the greatest number of species. The unimodal local dispersal-diversity relationship was predator-dependent, however, as selective press predation excluded species regardless of dispersal. Further, there was no effect of dispersal on beta diversity because predation generated local conditions that selected for distinct community assemblages. Spatial and temporal ecosystem stability responded to dispersal frequency but not predation. Low dispersal destabilized the spatial stability of producer biomass but stabilized temporal ecosystem productivity. The results indicate that selective predation can prevent species augmentation from mass effects but has no apparent influence on stability. Dispersal rates, in contrast, can have significant effects on both species diversity and ecosystem stability at multiple spatial scales in metacommunities.     

生物栅净化系统生物膜微生物群落结构动态的ERIC-PCR指纹图谱分析

用ERIC-PCR指纹图谱技术分析富营养化水体生物栅处理系统中2个工况7个净化池在不同监测时期微生物群落结构动态变化与主要污染物降解效果变化的关系.结果表明,采用生物栅技术的2～7号净化池的CODCr、总氮、氨氮、总磷的去除率较对照池分别提高了13.3%～58.6%、23.6%～65.8%、15.5%～72.9%和16.8%～76.9%,表明生物栅技术在污染物去除方面起到了重要作用.随着系统的运行微生物多样性指数逐渐增大,工况1第1次和第2次生物膜样品的微生物多样性指数分别为1.77～1.91和1.96～2.35.设置凤眼莲的3个净化池填料生物膜微生物种类较未设置植物的净化池丰富.在工况2中,HRT为7.5h的3号、5号和7号反应池填料生物膜ERIC-PCR指纹图条带数比HRT为4h的2号、4号和6号要多,而根系生物膜上的微生物群落结构受HRT的影响小.研究表明,随着系统的运行,系统中微生物种群多样性指数增加,系统逐渐进入良好的稳定状态.图5表5参9     

Environmental factors affecting the standing crop of foraminifera in sublittoral and psammolittoral communities of a Long Island salt marsh

Representative samples from the epiphytic and psammolittoral communities were made during the summer of 1968 in North Sea Harbor, Southampton, Long Island, USA. In the epiphytic communities, the foraminifera were very patchy; 2.6% of the total samples accounted for 56.4% of the total foraminifera collected. The standing crop and species composition of the foraminifera changed throughout the summer. Two seasonal peaks were observed in the epiphytes. In early summer Protelphidium tisburyensis was the dominant form. In late July and August Elphidium incertum was dominant. Taken as a whole over the entire summer, the following species comprised the epiphytic foraminiferan community: Elphidium incertum (46.63%); Protelphidium tisburyensis (25.64%); Ammotium salsum (9.88%); Elphidium clavatum (6.74%); E. translucens (3.47%); Ammonia beccarii (2.83%); Ammobaculites dilatatus (2.08%); Trochammina inflata (1.8%); Elphidium advenum (< 1%); E. galvestonense (< 1%); E. gunteri (< 1%); Quinqueloculina lata (< 1%); Q. seminulum (< 1%) and Trochammina macrescens (< 1%). Although fewer species were found, many more foraminifera live in the benthos than in the epiphytic community. Taken as a whole, over the entire summer, the following species comprised the foraminifera in the psammolittoral community: Trochammina inflata (49.6%); Elphidium incertum (31.8%); Ammotium salsum (10.9%); Quinqueloculina seminulum (4.2%); Elphidium sp. (1.5); Protelphidium tisburyensis (0.9%); Ammonia beccarii (0.7%); Elphidium clavatum (< 0.1%); and E. translucens (< 0.1%). Three species, Ammotium salsum, Elphidium incertum and Trochammina inflata bloomed successively in the psammolittoral community. The distribution of the latter two species was correlated with the vertical and horizontal changes of grain size; Elphidium incertum distribution clustered around a median grain size of 0.1 mm, whereas Trochammina inflata clustered around a median grain size of 0.46 mm. The sediments were sampled both at high and low tide. No evidence was obtained to suggest migration of foraminifera through the sediments as a function of tidal cycle. Horizontal distribution of the foraminifera in the marsh was correlated with the flow patterns of very small rivulets in the study area. With respect to many species of foraminifera, the overlying epiphytic communities are not continuous with the psammolittoral communities below them in the water column. Protelphidium tisburyensis was an early summer dominant epiphyte, but was rare in the psammolittoral communities. Trochammina inflata, on the other hand, was dominant in the coarser, deeper sediments and was rare in the epiphytic community. Elphidium incertum is presumably a generalist species. It formed half the foraminiferan population throughout the water column. Ammotium salsum was also abundant in both communities.Supported by US AEC Contract AT (30-1) 3995. Ref. No. NYO 3995-16.Summarized from a thesis submitted by N. J. Matera in partial fulfillment of the requirements of Master of Arts at The City College of New York.University Institute of Oceanography of CUNY, Contribution No. 1.     

渭河浮游生物群落结构特征及其与环境因子的关系

渭河是黄河第一大支流,是黄河流域生态保护与高质量发展的重要研究区域.为了掌握渭河浮游生物组成结构及生态环境现状,于2018—2019年分两个季节在渭河开展4次水生态调查,研究分析了渭河浮游生物群落结构特征及其影响因子.调查结果显示,浮游植物有8门53种,以绿藻门和硅藻门为主,占比分别为43.4％、33.9％;浮游动物4...     

Influence of bacteria and diatoms in biofilms on metamorphosis of the marine slipper limpet <Emphasis Type="Italic">Crepidula onyx</Emphasis>

Larvae of the slipper limpet Crepidula onyx metamorphose in response to marine biofilms. In this study, we investigated how the percentage of larval metamorphosis in this species was affected by biofilms that differed in certain attributes. To manipulate bacterial and diatom cell densities and community composition, we developed biofilms in the laboratory (1) at different temperatures (16, 23 and 30°C) and salinities (20, 27 and 34‰), (2) with or without addition of antibiotics, and (3) in the light or in the dark. We also allowed biofilms to develop at three field sites with different prevailing environmental conditions so as to generate biofilms with different, but natural, attributes. Bacterial and diatom community composition in biofilms were determined using a DNA fingerprinting technique and microscopic examination, respectively. The effects of biofilms on metamorphosis were investigated in laboratory assays. The percentage of larval metamorphosis correlated with bacterial and diatom cell densities in only one of the three experiments conducted, but was substantially affected by differences in bacterial and diatom community composition in all three experiments. It also appears that metamorphosis of C. onyx depends on the simultaneous presence of both bacterial and diatom communities in biofilms.     

Species richness patterns along environmental gradients in island land molluscan fauna

The relationship between species richness and environmental variables may change depending on habitat structure, dispersal ability, species mixing, and community adaptation to the environment. It is crucial to know how these factors regulate the environment-diversity relationship. The land molluscan fauna of the Ogasawara Islands in the West Pacific is an excellent model system to address this question because of the high species endemicity (> 90%), small area, and simple habitat structure of the islands. I examined relationships among indigenous species composition, richness, and habitat condition, and especially productivity and forest moisture on the island of Anijima. Two major communities of snails could be distinguished by detrended correspondence analysis (DCA): one group dominated in a moist habitat with high productivity, and the other group dominated in a dry habitat with low productivity. However, species richness became highest at the intermediate condition between the habitats in which the two snail communities were dominant, so that species richness showed a hump-shaped relationship with moisture and productivity. In contrast, the species richness of the snail community in the moist habitat showed a monotonically positive correlation, and that in the dry habitat showed a monotonically negative correlation with moisture and productivity. Thus, the greater species richness in intermediate moisture and productivity resulted from the ecotone effect or community overlap at the transitional areas, where faunas with different ecologies can meet in a single site. These findings suggest that hump-shaped productivity-diversity relationships in land Mollusca would reflect the ecotone effect as a result of the mixing of species adapted to either fertile habitats or sterile habitats.     

Spatial characteristics analysis by PCR-DGGE for bacterial communities in surface sediments of Tangxi River,Hefei City北大核心CSCD

Microbes play an important role in material circulation and pollutant release in urban sediments, and its community structure can provide an important basis for evaluating the pollution load and ecosystem health of an urban river. In this study, bacterial communities in sediments from different locations of Tangxi River in Anhui Province were analyzed and compared, with an objective of evaluating the effects of aquatic environment on spatial characteristics of bacterial communities and the feasibility of using bacterial community composition as an indicator of urban river health. PCR-DGGE was applied to analyze the bacterial communities; fifteen major bands of 16S rDNA genes fragments from DGGE profiles of sediment samples were further eluted from gel, reamplified and sequenced. The sequences of these fragments were compared with the database in GenBank (NCBI). The collected samples were clustered based on UPGM Aanalysis. In addition, relationships between bacterial communities and environmental factors were analyzed by Monte Carlo test and redundancy analysis (RDA). The DGGE profiles indicated that upstream surface sediments had about 30 bands, but the differences in brightness were not significant. Although midstream surface sediments had only 18 bands on average, the brightness of some bands was relatively high, indicating that some dominant species of bacteria existed in these sediments. The amounts of bands in downstream sediments were between those of upstream and midstream, with some bands of high brightness. The NCBI comparison results showed that ten sequences shared 98-100% homology with known sequences, one with 97%, and the other four with uncultured bacteria. Shannon index (H) of bacterial diversity from upstream surface sediments was 3.31 on average, which was significantly (P < 0.05) higher than that of midstream surface sediments, and slightly higher than that of downstream surface sediments. UPGMA results showed both the distribution of bacteria communities and the diversity were strongly related with the sampling locations (Eigenvalue = 0.188, P = 0.134). Monte Carlo test and RDA analysis showed that the ion exchangeable form of nitrogen (IEF-N) was the main factor influencing the spatial characteristics of bacterial communities in the sediments. The aquatic plants had a significant effect on the richness of bacterial communities in the sediments, and the effectiveness of plant species was more notable than that of the vegetation coverage. The above results indicated that bacterial community structure and diversity in the surface sediments can well reflect the degree of urbanization development and effectiveness of ecological restoration in Tangxi River region.     

Comparative species composition and relative abundance of decapod crustaceans in marine habitats of Panamá

The community structure of the decapod crustacean fauna of 7 tropical, shallowwater, marine habitats (sandy beaches, mangrove swamps and rocky intertidal habitats on both the Pacific and Caribbean coasts of Panama, and Pocillopora damicornis coral habitat of the Bay of Panama) were examined and analyzed for species composition and relative abundances. Collections from the 7 habitats yielded 4361 individuals, representing 236 species. The number of species per habitat was (Pacific, Caribbean): sandy beach (16, 7); mangrove (20, 17); P. damicornis (53); rocky intertidal (78, 67). There were more species represented by more individuals in the Pacific habitats. An index of faunal similarity was calculated for each pair (Pacific-Caribbean) of habitats. This index is the number of ecologically similar congeneric species which occurred in both habitats expressed as a percentage of the total number of species present in the pair of habitats. For the sandy beach communities there were three Pacific species which were similar to three Caribbean species, a similarity of 6/23 or 26%. The index of similarity for the mangrove communities is 54% and for the rocky intertidal communities it is 37%. The P. damicornis community has affinities with the Pacific rocky intertidal community (18%), with that of the Caribbean rocky intertidal (16%) and with that of Indo-West Pacific pocilloporid corals (20%). A few specialized species dominated each of the communities. The habitats and the number of species accounting for over half of the individuals present are (Pacific, Caribbean): sandy beach (1, 1); mangrove (4, 4); P. damicornis (5); and rocky intertidal (3, 6). Most of the species in each community were represented by one or a few individuals.     

Environmental controls on the landscape-scale biogeography of stream bacterial communities

We determined the biogeographical distributions of stream bacteria and the biogeochemical factors that best explained heterogeneity for 23 locations within the Hubbard Brook watershed, a 3000-ha forested watershed in New Hampshire, USA. Our goal was to assess the factor, or set of factors, responsible for generating the biogeographical patterns exhibited by microorganisms at the landscape scale. We used DNA fingerprinting to characterize bacteria inhabiting fine benthic organic matter (FBOM) because of their important influence on stream nutrient dynamics. Across the watershed, streams of similar pH had similar FBOM bacterial communities. Streamwater pH was the single variable most strongly correlated with the relative distance between communities (Spearman's p = 0.66, P < 0.001) although there were other contributing factors, including the quality of the fine benthic organic matter and the amount of dissolved organic carbon and nitrogen in the stream water (P < 0.05 for each). There was no evidence of an effect of geographic distance on bacterial community composition, suggesting that dispersal limitation has little influence on the observed biogeographical patterns in streams across this landscape. Cloning and sequencing of small-subunit rRNA genes confirmed the DNA fingerprinting results and revealed strong shifts among bacterial groups along the pH gradient. With an increase in streamwater pH, the abundance of acidobacteria in the FBOM bacterial community decreased (from 71% to 38%), and the abundance of proteobacteria increased (from 11% to 47%). Together these results suggest that microorganisms, like "macro"-organisms, do exhibit biogeographical patterns at the landscape scale and that these patterns may be predictable based on biogeochemical factors.     

Plankton biodiversity along a gradient of productivity and its mediation by macrophytes

We studied the effect of aquatic vegetation on the process of species sorting and community assembly of three functional groups of plankton organisms (phytoplankton, seston-feeding zooplankton, and substrate-dwelling zooplankton) along a primary productivity gradient. We performed an outdoor cattle tank experiment (n = 60) making an orthogonal combination of a primary productivity gradient (four nutrient addition levels: 0, 10, 100, and 1000 microg P/L; N/P ratio: 16) with a vegetation gradient (no macrophytes, artificial macrophytes, and real Elodea nuttallii). We used artificial plants to evaluate the mere effects of plant physical structure independently from other plant effects, such as competition for nutrients or allelopathy. The tanks were inoculated with species-rich mixtures of phytoplankton and zooplankton. Both productivity and macrophytes affected community structure and diversity of the three functional groups. Taxon richness declined with increasing plankton productivity in each functional group according to a nested subset pattern. We found no evidence for unimodal diversity-productivity relationships. The proportional abundance of Daphnia and of colonial Scenedesmus increased strongly with productivity. GLM analyses suggest that the decline in richness of seston feeders was due to competitive exclusion by Daphnia at high productivity. The decline in richness of phytoplankton was probably caused by high Daphnia grazing. However, partial analyses indicate that these explanations do not entirely explain the patterns. Possibly, environmental deterioration associated with high productivity (e.g., high pH) was also responsible for the observed richness decline. Macrophytes had positive effects on the taxon richness of all three functional plankton groups and interacted with the initial productivity gradient in determining their communities. Macrophytes affected the composition and diversity of the three functional groups both by their physical structure and through other mechanisms. Part of the macrophyte effect may be indirect via a reduction of phytoplankton production. Our results also indirectly suggest that the often reported unimodal relationship between primary productivity and diversity in nature may be partially mediated by the tendency of submerged macrophytes to be most abundant at intermediate productivity levels.