Inclusion of sex chromosomes in noninvasive prenatal testing in Asia,Australia, Europe and the USA: A survey study

Objective

To examine the extent to which sex chromosomes are included in current noninvasive prenatal testing (NIPT) and the reporting practices with respect to fetal chromosomal sex and sex chromosome aberrations (SCAs), in addition to an update on the general implementation of NIPT.

Method

A questionnaire addressing the research objectives was distributed by email to fetal medicine and clinical genetics experts in Asia, Australia, Europe and the USA.

Results

Guidelines on NIPT are available in the majority of the included countries. Not all existing guidelines address reporting of fetal chromosomal sex and SCAs. In most settings, NIPT frequently includes sex chromosomes (five Australian states, China, Hong Kong, Israel, Singapore, Thailand, USA and 23 of 31 European countries). This occurs most often by default or when parents wish to know fetal sex. In most settings, a potential SCA is reported by stating the risk hereof as “low” or “high” and/or by naming the SCA. Less than 50% of all pregnant women receive NIPT according to respondents from three Australian states, China, Israel, Singapore, Thailand and 24 of 31 European countries. However, this percentage, the genomic coverage of NIPT and its application as primary or secondary screening vary by setting.

Conclusion

In most of the studied countries/states, NIPT commonly includes sex chromosomes. The reporting practices concerning fetal chromosomal sex and SCAs are diverse and most commonly not addressed by guidelines. In general, NIPT is variably implemented across countries/states.     

Interrelationships among shrub encroachment, land management, and litter decomposition in a semidesert grassland.

Encroachment of woody plants into grasslands, and subsequent brush management, are among the most prominent changes to occur in arid and semiarid systems over the past century. Despite the resulting widespread changes in landcover, substantial uncertainty about the biogeochemical impacts of woody proliferation and brush management exists. We explored the role of shrub encroachment and brush management on leaf litter decomposition in a semidesert grassland where velvet mesquite (Prosopis velutina) abundance has increased over the past 100 years. This change in physiognomy may affect decomposition directly, through altered litter quality or quantity, and indirectly through altered canopy structure. To assess the direct and indirect impacts of shrubs on decomposition, we quantified changes in mass, nitrogen, and carbon in litterbags deployed under mesquite canopies and in intercanopy zones. Litterbags contained foliage from mesquite and Lehmann lovegrass (Eragrostis lehmanniana), a widespread, nonnative grass in southern Arizona. To explore short- and long-term influences of brush management on the initial stages of decomposition, litterbags were deployed at sites where mesquite canopies were removed three weeks, 45 years, or 70 years prior to study initiation. Mesquite litter decomposed more rapidly than lovegrass, but negative indirect influences of mesquite canopies counteracted positive direct effects. Decomposition was positively correlated with soil infiltration into litterbags, which varied with microsite placement, and was lowest under canopies. Low under-canopy decomposition was ostensibly due to decreased soil movement associated with high under-canopy herbaceous biomass. Decomposition rates where canopies were removed three weeks prior to study initiation were comparable to those beneath intact canopies, suggesting that decomposition was driven by mesquite legacy effects on herbaceous cover-soil movement linkages. Decomposition rates where shrubs were removed 45 and 70 years prior to study initiation were comparable to intercanopy rates, suggesting that legacy effects persist less than 45 years. Accurate decomposition modeling has proved challenging in arid and semiarid systems but is critical to understanding biogeochemical responses to woody encroachment and brush management. Predicting brush-management effects on decomposition will require information on shrub-grass interactions and herbaceous biomass influences on soil movement at decadal timescales. Inclusion of microsite factors controlling soil accumulation on litter would improve the predictive capability of decomposition models.     

Development of a Dynamic Pharmacokinetic Model to Estimate Bioconcentration of Xenobiotics in Earthworms

A simple and dynamic pharmacokinetic model was developed to predict bioconcentration of organic contaminants in earthworms. The model was parameterized experimentally by placing Lumbricus terrestris in soil contaminated with 200 μg/cm² of malathion. The toxicokinetics of malathion uptake, depuration, and degradation in soil is measured. After parameterization, the model was able to accurately predict the bioconcentration factor of malathion at steady state. Sensitivity analyses were performed and the rate of absorption was determined to be the most sensitive parameter. Varying the rate of malathion elimination from earthworm tissues, malathion degradation, and the amount of malathion applied to the soil by 25-fold did not result in the bioconcentration of malathion. An increase in the rate of malathion absorption into earthworm tissues by 25-fold did result in bioconcentration. Previously published pharmacokinetic studies on xenobiotics with log K _ow values ranging up to 8.05 were used to test the predictive capacity of the model. The model was able to predict from 83% to 105% of the experimentally derived bioconcentration factors.     

Characterization of isolated yeast growth response to methionine analogs

Methionine is one of the first limiting amino acids in poultry nutrition. The use of methionine-rich natural feed ingredients, such as soybean meal or rapeseed meal may lead to negative environmental consequences. Amino acid supplementation leads to reduced use of protein-rich ingredients. The objectives of this study were isolation of potentially high content methionine-containing yeasts, quantification of methionine content in yeasts and their respective growth response to methionine analogs. Minimal medium was used as the selection medium and the isolation medium of methionine-producing yeasts from yeast collection and environmental samples, respectively. Two yeasts previously collected along with six additional strains isolated from Caucasian kefir grains, air-trapped, cantaloupe, and three soil samples could grow on minimal medium. Only two of the newly isolated strains, K1 and C1, grew in minimal medium supplied with either methionine analogs ethionine or norleucine at 0.5% (w/v). Based on large subunit rRNA sequences, these isolated strains were identified as Pichia udriavzevii/Issatchenkia orientalis. P. kudriavzevii/I. orentalis is a generally recognized as a safe organism. In addition, methionine produced by K1 and C1 yeast hydrolysate yielded 1.3 ± 0.01 and 1.1 ± 0.01 mg g^?1 dry cell. Yeast strain K1 may be suitable as a potential source of methionine for dietary supplements in organic poultry feed but may require growth conditions to further increase their methionine content.     

Pinning down vulnerability: from narratives to numbers

Social vulnerability analyses have typically relied upon narratives to capture the nuances of the concept. While narratives have enhanced our understanding of the multiple drivers of vulnerability, they have had limited influence on hazards and climate adaptation policy. This is partially a function of the different needs and goals of the policy and research communities. The former prioritises generalised quantitative information, while the latter is more concerned with capturing complexity. A theoretically driven and empirically tested quantitative vulnerability and capacities index (VCI) for use at the local scale is presented to help connect vulnerability research and policy. There are four versions of the index for use in rural and urban contexts at the household and community levels. There can be an infinite number of drivers of vulnerability, but the VCI draws upon 12 indicators to represent material, institutional and attitudinal aspects of differential vulnerability and capacities.     

Perceptions of behaviors that cause and mitigate global warming and intentions to perform these behaviors

Individual household and travel behaviors represent a sizeable contribution to U.S. greenhouse gas emissions. This paper investigates people's knowledge of these behaviors and perceptions of these behaviors' impact in causing and mitigating climate change. In the present study, a sample of college students were asked to list the behaviors they perform that cause global warming (GW) and the behaviors they could perform to mitigate GW, to rate the impact of the behaviors in terms of their effect on causing or mitigating GW, and to rate their intention to perform each of the behaviors. Results revealed that this sample was well aware of the effect of driving on GW. However, participants underestimated the relative impact of adjusting the thermostat and eating meat on GW and overestimated the impact of littering on causing GW. Although knowledge about GW-mitigating behaviors was not consistently related to behavioral intention, belief that a behavior mitigated GW (whether accurate or not) was strongly related to intention to perform that behavior. Specifically, correlations between belief in the mitigating potential of a behavior and intention were relatively high for adjusting the thermostat, reducing meat consumption, and several behaviors that do not mitigate GW, but were relatively low for reducing driving and not littering. Practical implications and comparisons with previous literature are discussed.     

A comparison of strike and prey capture kinematics of three species of piscivorous fishes: Florida gar ( Lepisosteus platyrhincus), redfin needlefish ( Strongylura notata), and great barracuda ( Sphyraena barracuda)

Ram feeding is the process by which a predatory fish uses a high-velocity lunge or chase to overtake its prey. This study compares the strike and prey capture behaviors and kinematics of three species of ram-feeding fishes: Florida gar Lepisosteus platyrhincus, redfin needlefish Strongylura notata, and great barracuda Sphyraena barracuda. These ram-feeding piscivores are morphologically similar with fusiform bodies, posteriorly placed dorsal and anal fins, and large, conical teeth. Strike and prey capture kinematics for five individuals of each species were recorded with high-speed video. Pre-strike behavior in L. platyrhincus consists of a slow stalk, resulting in the close, lateral positioning of the predators head relative to the prey. Lepisosteus employ a sideways lunge of the head during the strike, which lasts only 25–40 ms and is the most rapid strike among these three species. Strongylura notata and Sphyraena barracuda exhibit longitudinal orientation to the prey before the strike, followed by a high velocity, head-on lunge, initiated by an s-start in Sphyraena barracuda. Prey capture in adult L. platyrhincus and Strongylura notata is characterized by the jaws closing on the prey, with the prey held orthogonal to the jaws. This is followed by manipulation using the inertia of the prey to reposition the prey head first, and then suction transport into the buccal cavity. Prey capture in juvenile Sphyraena is accomplished by closing the jaws after the prey has entered the buccal cavity, resulting in possible ram transport of the prey with no oral manipulation under these experimental conditions. Although these three species all employ ram feeding for prey capture of elusive prey, each species has a unique repertoire that appears to minimize hydrodynamic constraints and prey response, utilize locomotory capabilities, and may be suited to each species specific habitat.Communicated by P.W. Sammarco, Chauvin