Examination of Salmonella and Escherichia coli translocation from hog manure to forage, soil, and cattle grazed on the hog manure-treated pasture

Use of hog (Sus scrofa) manure as a fertilizer is a practical solution for waste re-utilization, however, it may serve as a vehicle for environmental and domestic animal contamination. Work was conducted to determine whether pathogens, naturally present in hog manure could be detected in cattle (Bos taurus) grazed on the manure-treated pasture, and whether forage contamination occurred. During two 3 mo summer trials manure was applied to yield < or = 124 kg available N per hectare in a single spring or split spring and fall application. Samples of hog manure, forage, soil, and cattle feces were analyzed for naturally occurring Salmonella, Yersinia enterocolitica, and Escherichia coli. To follow movement of Salmonella in the environment isolates were identified to serovar and serotyped. Transfer of E. coli from hog manure to soil and cattle was examined by randomly amplified polymorphic DNA (RAPD) analysis of >600 E. coli isolates. While Y. enterocolitica was absent from all samples, in both years S. enterica Derby and S. enterica Krefeld were found in most hog manure samples, but were only on forage samples in the second year. Salmonella enterica Typhimurium, absent from hog manure was present on some forage in the first year. Cattle feces and soil samples were consistently Salmonella negative. These contaminations could not be traced to manure application. During this study, Salmonella and E. coli found in hog manure had different RAPD genomic profiles from those found in the feces of cattle grazing on manure-treated pasture.     

Impact of growth conditions on transport behavior of E. coli

The aim of this investigation is to determine the effect that growth solution has on the cell surface properties and transport behavior of eleven Escherichia coli isolates through saturated porous media. The two growth solutions used were a standard laboratory growth medium (LB) and a dairy manure extract solution. In general, cells grown in manure extract were more hydrophobic, had a more negative zeta potential, had lower amounts of surface macromolecules, and had lower attachment efficiencies than isolates grown in LB. An inverse relationship between the natural log of zeta potential and the attachment efficiency of the isolates for the cells grown in LB media was the only statistically significant correlation observed between transport behavior and cell characteristics of the isolates. This study shows the need to consider growth conditions when studying bacteria to better mimic the environmental stresses that bacteria undergo in the natural environment. This approach could lead to a better understanding of the behavior of manure-derived bacteria in aquatic and terrestrial environments.     

Fungal biotransformation of 6:2 fluorotelomer alcohol

Fungal degradation of 6:2 fluorotelomer alcohol (6:2 FTOH, C₆F₁₃CH₂CH₂OH) by two wood‐decaying fungal strains and six fungal isolates from a site contaminated with per‐ and polyfluoroalkyl substances (PFASs) was investigated. 6:2 FTOH is increasingly being used in FTOH‐based products, and previous reports on the microbial fate of 6:2 FTOH have focused on bacteria and environmental microbial consortia. Prior to this study, one report demonstrated that the 6:2 FTOH biotransformation by the wood‐decaying fungus, Phanerochaete chrysosporium, generated more polyfluoroalkyl substances, such as 5:3 acid (F(CF₂)₅CH₂CH₂COOH), and diverted away from producing the highly stable perfluorocarboxylic acids (PFCAs). Most of the fungi (Gloeophyllum trabeum and isolates TW4‐2, TW4‐1, B79, and B76) examined in this study showed similar degradation patterns, further demonstrating that fungi yield more 5:3 acid (up to 51 mol% of initial 6:2 FTOH dosed) relative to other metabolites (up to 12 mol% total PFCAs). However, medium amendments can potentially improve 6:2 FTOH biotransformation rates and product profiles. The six fungal isolates tolerated up to 100 or 1,000 milligrams per liter of perfluorooctanoic acid and perfluorooctane sulfonic acid, and some isolates experienced increased growth with increasing concentrations. This study proposes that fungal pathways must be considered for the biotransformation of potential PFAS precursors, such as 6:2 FTOH, and suggests the basis for selecting proper microorganisms for remediation of fluoroalkyl‐contaminated sites.     

In harm’s way: Non-migration decisions of people at risk of slow-onset coastal hazards in Bangladesh

Non-migration is an adaptive strategy that has received little attention in environmental migration studies. We explore the leveraging factors of non-migration decisions of communities at risk in coastal Bangladesh, where exposure to both rapid- and slow-onset natural disasters is high. We apply the Protection Motivation Theory (PMT) to empirical data and assess how threat perception and coping appraisal influences migration decisions in farming communities suffering from salinization of cropland. This study consists of data collected through quantitative household surveys (n = 200) and semi-structured interviews from four villages in southwest coastal Bangladesh. Results indicate that most respondents are unwilling to migrate, despite better economic conditions and reduced environmental risk in other locations. Land ownership, social connectedness, and household economic strength are the strongest predictors of non-migration decisions. This study is the first to use the PMT to understand migration-related behaviour and the findings are relevant for policy planning in vulnerable regions where exposure to climate-related risks is high but populations are choosing to remain in place.Supplementary InformationThe online version contains supplementary material available at 10.1007/s13280-021-01552-8.     

Using a State-and-Transition Approach to Manage Endangered Eucalyptus albens (White Box) Woodlands

Eucalyptus albens (White Box) woodlands are among the most poorly conserved and threatened communities in Australia. Remnants are under further threat from stock grazing, deteriorating soil conditions, weed invasion, and salinity. There is an urgent need to restore degraded White Box and other woodland ecosystems to improve landscape function. However, there is still a poor understanding of the ecology of degraded woodland ecosystems in fragmented agricultural landscapes, and consequently a lack of precise scientific guidelines to manage these ecosystems in a conservation context. State and Transition Models (STMs) have received a great deal of attention, mainly in rangeland applications, as a suitable framework for understanding the ecology of complex ecosystems and to guide management. We have developed a STM for endangered White Box woodlands and discuss the merits of using this approach for land managers of other endangered ecosystems. An STM approach provides a greater understanding of the range of states, transitions, and thresholds possible in an ecosystem, and provides a summary of processes driving the system. Importantly, our proposed STM could be used to clarify the level of “intactness” of degraded White Box woodland sites, and provide the impetus to manage different states in complementary ways, rather than attempting to restore ecosystems to one pristine stable state. We suggest that this approach has considerable potential to integrate researcher and land manager knowledge, focus future experimental studies, and ultimately serve as a decision support tool in setting realistic and achievable conservation and restoration goals.     

Integrating Human Impacts and Ecological Integrity into a Risk-Based Protocol for Conservation Planning

Conservation planning aims to protect biodiversity by sustainng the natural physical, chemical, and biological processes within representative ecosystems. Often data to measure these components are inadequate or unavailable. The impact of human activities on ecosystem processes complicates integrity assessments and might alter ecosystem organization at multiple spatial scales. Freshwater conservation targets, such as populations and communities, are influenced by both intrinsic aquatic properties and the surrounding landscape, and locally collected data might not accurately reflect potential impacts. We suggest that changes in five major biotic drivers—energy sources, physical habitat, flow regime, water quality, and biotic interactions—might be used as surrogates to inform conservation planners of the ecological integrity of freshwater ecosystems. Threats to freshwater systems might be evaluated based on their impact to these drivers to provide an overview of potential risk to conservation targets. We developed a risk-based protocol, the Ecological Risk Index (ERI), to identify watersheds with least/most risk to conservation targets. Our protocol combines risk-based components, specifically the frequency and severity of human-induced stressors, with biotic drivers and mappable land- and water-use data to provide a summary of relative risk to watersheds. We illustrate application of our protocol with a case study of the upper Tennessee River basin, USA. Differences in risk patterns among the major drainages in the basin reflect dominant land uses, such as mining and agriculture. A principal components analysis showed that localized, moderately severe threats accounted for most of the threat composition differences among our watersheds. We also found that the relative importance of threats is sensitive to the spatial grain of the analysis. Our case study demonstrates that the ERI is useful for evaluating the frequency and severity of ecosystemwide risk, which can inform local and regional conservation planning.     

Greenhouse gas and alcohol emissions from feedlot steers and calves

Livestock's contributions to climate change and smog-forming emissions are a growing public policy concern. This study quantifies greenhouse gas (GHG) and alcohol emissions from calves and feedlot steers. Carbon dioxide (CO) methane (CH), nitrous oxide (NO), ethanol (EtOH), and methanol (MeOH) were measured from a total of 45 Holstein and Angus steers and 9 Holstein calves representative of four different growth stages commonly present on calf ranches and commercial feedlots. Individuals from each animal type were randomly assigned to three equal replicate groups of nine animals per group. Steers were fed a high concentrate diet and calves a milk replacer and grain supplement. Cattle and calves were housed in groups of three animals in an environmental chamber for 24 h. The CO, NO, EtOH, and MeOH concentrations from the air inlet and outlet of the chamber were measured using an INNOVA 1412 monitor and CH using a TEI 55C methane analyzer. Emission rates (g head h) were calculated. The GHGs were mainly produced by enteric fermentation and respiration and differed across life stages of cattle. Compared with dairy cows, feedlot steers produce relatively less GHG. In general, ethanol and methanol, the most important volatile organic compound (VOC) group in the dairy sector, were below the lower limit of detection of the gas analyzer. The present data will be useful to verify models and to enhance GHG emission inventories for enteric fermentation, respiration, and fresh excreta for numerous cattle life stages across the beef industry.     

Environmental Flows Can Reduce the Encroachment of Terrestrial Vegetation into River Channels: A Systematic Literature Review

Encroachment of riparian vegetation into regulated river channels exerts control over fluvial processes, channel morphology, and aquatic ecology. Reducing encroachment of terrestrial vegetation is an oft-cited objective of environmental flow recommendations, but there has been no systematic assessment of the evidence for and against the widely-accepted cause-and-effect mechanisms involved. We systematically reviewed the literature to test whether environmental flows can reduce the encroachment of terrestrial vegetation into river channels. We quantified the level of support for five explicit cause-effect hypotheses drawn from a conceptual model of the effects of flow on vegetation. We found that greater inundation, variously expressed as changes in the area, depth, duration, frequency, seasonality, and volume of surface water, generally reduces riparian vegetation abundance in channels, but most studies did not investigate the specific mechanisms causing these changes. Those that did show that increased inundation results in increased mortality, but also increased germination. The evidence was insufficient to determine whether increased inundation decreases reproduction. Our results contribute to hydro-ecological understanding by using the published literature to test for general cause-effect relationships between flow regime and terrestrial vegetation encroachment. Reviews of this nature provide robust support for flow management, and are more defensible than expert judgement-based approaches. Overall, we predict that restoration of more natural flow regimes will reduce encroachment of terrestrial vegetation into regulated river channels, partly through increased mortality. Conversely, infrequent deliveries of environmental flows may actually increase germination and subsequent encroachment.