Assessing the potential for greenhouse gas mitigation in intensively managed annual cropping systems at the regional scale

We predicted changes in yields and direct net soil greenhouse gas (GHG) fluxes from converting conventional to alternative management practices across one of the world's most productive agricultural regions, the Central Valley of California, using the DAYCENT model. Alternative practices included conservation tillage, winter cover cropping, manure application, a 25% reduction in N fertilizer input and combinations of these. Alternative practices were evaluated for all unique combinations of crop rotation, climate, and soil types for the period 1997-2006. The crops included were alfalfa, corn, cotton, melon, safflower, sunflower, tomato, and wheat. Our predictions indicate that, adopting alternative management practices would decrease yields up to 5%. Changes in modeled SOC and net soil GHG fluxes corresponded to values reported in the literature. Average potential reductions of net soil GHG fluxes with alternative practices ranged from −0.7 to −3.3 Mg CO₂-eq ha⁻¹ yr⁻¹ in the Sacramento Valley and −0.5 to −2.5 Mg CO₂-eq ha⁻¹ yr⁻¹ for the San Joaquin Valley. While adopting a single alternative practice led to modest net soil GHG flux reductions (on average −1 Mg CO₂-eq ha⁻¹ yr⁻¹), combining two or more of these practices led to greater decreases in net soil GHG fluxes of up to −3 Mg CO₂-eq ha⁻¹ yr⁻¹. At the regional scale, the combination of winter cover cropping with manure application was particularly efficient in reducing GHG emissions. However, GHG mitigation potentials were mostly non-permanent because 60-80% of the decreases in net soil GHG fluxes were attributed to increases in SOC, except for the reduced fertilizer input practice, where reductions were mainly attributed to decreased N₂O emissions. In conclusion, there are long-term GHG mitigation potentials within agriculture, but spatial and temporal aggregation will be necessary to reduce uncertainties around GHG emission reductions and the delivery risk of the associated C credits.     

Prenatal diagnosis of cystinosis utilizing chorionic villus sampling

The prenatal diagnosis of cystinosis is currently based on the increased amount of free-cystine present in amniotic fluid cells. Amniocyte cultures must be grown for at least 2 weeks to obtain sufficient cells for such measurements. Thus, the diagnosis cannot be made until close to 20 weeks gestational age by this method. We report a case in which chorionic villi were used for direct cystine measurement resulting in the in utero diagnosis of cystinosis at 9 weeks gestational age. The diagnosis was confirmed by the study of cultured chorionic villus cells, and of the 10-week abortus.     

NUTGRANJA 2.0: a simple mass balance model to explore the effects of different management strategies on nitrogen and greenhouse gases losses and soil phosphorus changes in dairy farms

Farm nutrient management has been identified as one of the most important factors determining the economic and environmental performance of dairy cattle (Bos taurus) farming systems. Given the environmental problems associated with dairy farms, such as emissions of greenhouse gases (GHG), and the complex interaction between farm management, environment and genetics, there is a need to develop robust tools which enable scientists and policy makers to study all these interactions. This paper describes the development of a simple model called NUTGRANJA 2.0 to evaluate GHG emissions and nitrogen (N) and phosphorus (P) losses from dairy farms. NUTGRANJA 2.0 is an empirical mass-balance model developed in order to simulate the main transfers and flows of N and P through the different stages of the dairy farm management. A model sensitivity test was carried out to explore some of the sensitivities of the model in relation to the simulation of GHG and N emissions. This test indicated that both management (e.g. milk yield per cow, annual fertiliser N rate) and site-specific factors (e.g. % clover (Trifolium) in the sward, soil type, and % land slope) had a large effect on most of the model state variables studied (e.g. GHG and N losses).     

Soil microbial response to herbicides applied to glyphosate-resistant canola

Adoption of glyphosate-resistant canola (Brassica napus L.) has increased glyphosate applications to this crop, and concerns have been raised about unintended consequences of these multiple applications. A field trial was conducted to evaluate the effects of pre-seed and in-crop glyphosate and alternative herbicides on soil microbial community functional structure, diversity and biomass. Pre-seed treatments were 2,4-D, glyphosate and 2,4-D + glyphosate, and in-crop treatments were glyphosate applied once, glyphosate applied twice, ethalfluralin, ethalfluralin + sethoxydim + ethametsulfuron + clopyralid, and sethoxydim + ethametsulfuron. Rhizosphere and bulk soil was collected at flowering stage of canola and analyzed for bacterial community-level substrate utilization patterns and microbial biomass C (MBC). Where differences were significant, pre-seed application of both 2,4-D and glyphosate altered the functional structure and reduced the functional diversity of soil bacteria, but increased MBC. These effects were not necessarily concurrent. The reduction in functional diversity was due to reduction in evenness, which means that the soil where both pre-seed herbicides had been applied was dominated by only few functional groups. In 1 year, two in-crop applications of glyphosate also reduced the functional diversity of soil bacteria when applied after pre-seed 2,4-D, as did in-crop sethoxydim + ethametsulfuron following pre-seed glyphosate. Even though significant differences between herbicides were fewer than non-significant differences, i.e., there were no changes in soil microbial community structure, diversity or biomass in response to glyphosate or alternative herbicides applied to glyphosate-resistant canola in most cases, the observed changes in soil microbial communities could affect soil food webs and biological processes.