Stress-related ecophysiology of members of the genus Rhodanobacter isolated from a mixed waste contaminated subsurface

• Rhodanobacter spp. are dominant in acidic, high nitrate and metal contaminated sites. • Dominance of Rhodanobacter is likely due to tolerance to low pH and heavy metals. • High organic content increases stress tolerance capacity. • Longer incubation time is critical for accurate assessment of MIC (various stresses). This work examines the physiologic basis of stress tolerance in bacterial strains of the genus Rhodanobacter that dominate in the acidic and highly metal contaminated near-source subsurface zone of the Oak Ridge Integrated Field Research Challenge (ORIFRC) site. Tolerance of R. denitrificans to levels of different stresses were studied in synthetic groundwater medium and R2A broth. Two strains of R. denitrificans, strains 2APBS1^T and 116-2, tolerate low to circumneutral pH (4–8), high Uranium (1 mmol/L), elevated levels of nitrate (400 mmol/L) and high NaCl (2.5%). A combination of physiologic traits, such as growth at low pH, increased growth in the presence of high organics concentration, and tolerance of high concentrations of nitrate, NaCl and heavy metals is likely responsible for dominance of Rhodanobacter at the ORIFRC site. Furthermore, extended incubation times and use of low carbon media, better approximating site groundwater conditions, are critical for accurate determination of stress responses. This study expands knowledge of the ecophysiology of bacteria from the genus Rhodanobacter and identifies methodological approaches necessary for acquiring accurate tolerance data.     

238U series isotopes and 232Th in carbonates and black shales from the Lesser Himalaya: implications to dissolved uranium abundances in Ganga-Indus source waters

238U and (232)Th concentrations and the extent of (238)U-(234)U-(230)Th radioactive equilibrium have been measured in a suite of Precambrian carbonates and black shales from the Lesser Himalaya. These measurements were made to determine their abundances in these deposits, their contributions to dissolved uranium budget of the headwaters of the Ganga and the Indus in the Himalaya and to assess the impact of weathering on (238)U-(234)U-(230)Th radioactive equilibrium in them. (238)U concentrations in Precambrian carbonates range from 0.06 to 2.07 microg g(-1). The 'mean' U/Ca in these carbonates is 2.9 ng U mg(-1) Ca. This ratio, coupled with the assumption that all Ca in the Ganga-Indus headwaters is of carbonate origin and that U and Ca behave conservatively in rivers after their release from carbonates, provides an upper limit on the U contribution from these carbonates, to be a few percent of dissolved uranium in rivers. There are, however, a few streams with low uranium concentrations, for which the carbonate contribution could be much higher. These results suggest that Precambrian carbonates make only minor contributions to the uranium budget of the Ganga-Indus headwaters in the Himalaya on a basin wide scale, however, they could be important for particular streams. Similar estimates of silicate contribution to uranium budget of these rivers using U/Na in silicates and Na* (Na corrected for cyclic and halite contributions) in river waters show that silicates can contribute significantly (approximately 40% on average) to their U balance. If, however, much of the uranium in these silicates is associated with weathering resistant minerals, then the estimated silicate uranium component would be upper limits.Uranium concentration in black shales averages about 37 microg g(-1). Based on this concentration, supply of U from at least approximately 50 mg of black shales per liter of river water is needed to balance the average river water U concentration, 1.7 microg L(-1) in the Ganga-Indus headwaters. Data on the abundance and distribution of black shales in their drainage basin are needed to test if this requirement can be met. (234)U/(238)U activity ratios in both carbonates and black shales are at or near equilibrium, thus preferential mobilization of (234)U from these deposits, if any, is within analytical uncertainties. (230)Th is equivalent to or in excess of (238)U in most of the carbonates. (230)Th/(238)U>1 indicates that during weathering, uranium is lost preferentially over Th. (232)Th concentrations in carbonates are generally quite low, <0.5 microg g(-1), though with a wide range, 0.01-4.8 microg g(-1). The variation in its concentrations seem to be regulated by aluminosilicate content of the carbonates as evident from the strong positive correlation between (232)Th and Al.     

Modeling inverted biomass pyramids and refuges in ecosystems

Although the existence of robust inverted biomass pyramids (IBPs) seems paradoxical, they are well known to exist in planktonic communities, and have recently been discovered in pristine coral reefs and in a reef off the North Carolina coast. Understanding the underlying mechanisms which produce inverted biomass pyramids provides new ecological insights. Some ecologists hypothesize that “the high growth rate of prey and low death rate of predators” causes IBPs. However, we show this is not always the case (see Sections 3.1 and 4). We devise predator–prey models to describe three mechanisms that can lead to IBPs: (1) well-mixed populations with large prey turn-over rate, (2) well-mixed populations with prey immigration, and (3) non-mixed populations where the prey can hide in refuges. The three models are motivated by the three ecosystems where IBPs have been observed. We also devise three refuge mediated models, with explicit refuge size, which incorporate different prey responses in the refuge, and we discuss how these lead to IBPs.     

Evaluation of adsorption potential of adsorbents: a case of uptake of cationic dyes

Adsorption potential of a commercial activated carbon (FS300) has been evaluated for the uptake of cationic dyes namely methylene blue (MB) and rhodamine B (RB). Though, there are numerous studies in literature which report the sorption of MB (more than 40 studies) and RB (more than 10), however none of these use a common parameter to report the capacity of the sorbent. A protocol, based on the equilibrium dye concentration has been proposed to measure the sorption potential of a sorbent. The Langmuir model can very well describe the experimental equilibrium data for both dyes (coefficient of correlation > 0.999). MB (Qm = 312.5 mg g(-1)) is more adsorbable than the RB (Qm = 144.9 mg g(-1)). Molecular weight and chemical structure of dye molecules seem to affect the dye uptake. The effect of pH on dye uptake has also been evaluated by varyingpH from 3 to 11. Uptake of MB increases with pH, wherein RB removal decreases with pH. Dyes could not be desorbed either by distilled water (0.06 and 0.11% for MB and RB respectively), or by 0.1 NHCl (0.136 and 3.0% for MB and RB respectively) indicating, chemical adsorption type of adsorbent-adsorbate interactions.     

Impact of copper on haematological profile of freshwater fish, Channa punctatus

The present study was to evaluate heavy metal toxicity stress symptoms in fish blood during long-term exposure of sublethal concentration of copper sulphate (CuSO4). The effects of copper on various heamatological parameters were evaluated exposing Indian fresh water fish, Channa punctatus to a sub-lethal concentration of copper sulphate (0.36 mg l(-1)) for different periods. Exposure of fish to copper showed a significant decrease in the haemoglobin (Hb) content from 10.73 to 6.60%, red blood cells (RBC) from 2.86 to 1.84 x 10(6)/mm3 and packed cell volume (PCV) from 31.00 to 23.33% at the end of 45th day as compared to control. Whereas the white blood cells (WBC) increased from 60.00 to 92.48 x10(3)/mm3, clotting time (CT) from 27.66 to 43.00 second, erythrocyte sedimentation rate from 5.0 to 13.66 mm/hr and mean corpuscular volume from 108.11 to 126.85 cmu, significantly, with increase in exposure periods. Although mean corpuscular haemoglobin concentration (MCHC) and mean corpuscular haemoglobin (MCH) values showed significant increase during 15 and 30 days exposures, both the values were found significantly increased at the end of the experimental period. The differential leucocytes count (DLC) showed a significant increase in the populations of lymphocytes and eosinophils, whereas neutrophils, monocytes and basophiles were found decreased after exposure to copper.     

Heavy metal pollution in Suva harbour sediments,Fiji

In Fiji, contamination of the coastal environment by heavy metals is proving to be a real concern. This work reports for the first time analyses carried out on an extensive basis, to ascertain the extent of anthropogenic contamination by heavy metals in the <0.063 mm surface sediments of Suva harbour. Sediment samples from 40 sites selected within the harbour were collected and analysed for five heavy metals. The levels of the metals range from 21.4 to 143.0 ± 0.1 mg/kg Cu, 1.40 to 4.87 ± 0.07 wt.% Fe, 22.1 to 93.5 ± 0.3 mg/kg Pb, 40.2 to 269.0 ± 0.3 mg/kg Zn and 1.1 to 2.6 ± 0.2 mg/kg Sn. With reference to the pristine area of the Great Astrolabe, in Kadavu, the acquired data from the harbour are indicative of heavy metal pollution. This could be attributed to the numerous industrial and commercial activities at Wailada and Walu Bay industrial areas, the municipal dump located at the Suva foreshore and the Suva wharf. The pollution is further compounded by the high population density in Suva city.     

Essential oils and their bioactive compounds as green preservatives against fungal and mycotoxin contamination of food commodities with special reference to their nanoencapsulation

Environmental Science and Pollution Research - Fungal and mycotoxin contamination of stored food items is of utmost concern throughout the world due to their hazardous effects on mammalian systems....     

Assessment of growth and yield losses in two Zea mays L. cultivars (quality protein maize and nonquality protein maize) under projected levels of ozone

Rapid industrialization and economic developments have increased the tropospheric ozone (O₃) budget since preindustrial times, and presently, it is supposed to be a major threat to crop productivity. Maize (Zea mays L.), a C4 plant is the third most important staple crop at global level with a great deal of economic importance. The present study was conducted to evaluate the performance of two maize cultivars [HQPM1: quality protein maize (QPM)] and [DHM117: nonquality protein maize (NQPM)] to variable O₃ doses. Experimental setup included filtered chambers, nonfiltered chambers (NFC), and two elevated doses of O₃ viz. NFC+15 ppb O₃ (NFC+15) and NFC+30 ppb O₃ (NFC+30). During initial growth period, both QPM and NQPM plants showed hormetic effect that is beneficial due to exposure of low doses of a toxicant (NFC and NFC+15 ppb O₃), but at later stages, growth attributes were negatively affected by O₃. Growth indices showed the variable pattern of photosynthate translocation under O₃ stress. Foliar injury in the form of interveinal chlorosis and reddening of leaves due to increased production of anthocyanin pigments was observed at higher concentrations of O₃. One-dimensional gel electrophoresis of leaves taken from NFC+30 showed reductions of major photosynthetic proteins, and differential response was observed between the two test cultivars. Decline in the number of male flowers at elevated O₃ doses suggested damaging effect of O₃ on reproductive structures which might be a cause of productivity losses. Variable carbon allocation pattern particularly to husk leaves, foliar injury, and damage of photosynthetic proteins led to significant reductions in economic yield at higher O₃ doses. PCA showed that both the cultivars responded more or less similarly to O₃ stress in their respective groupings of growth and yield parameters, but magnitude of their response was variable. It is further supported by difference in the significance of correlations between variables of yield and AOT40. Cultivar response reflects that QPM performed better than NQPM against elevated O₃.     

Differences in responses of summer and winter spinach to elevated UV-B at varying soil NPK levels

Seasonal variations in response of spinach to elevated ultraviolet-B (UV-B) during summer and winter were assessed with respect to growth, biomass, yield, NPK uptake and NPK use efficiencies at varying NPK levels. The nutrient amendments were recommended NPK (RNPK) and 1.5 times recommended NPK (1.5 RNPK). Season significantly affected the measured parameters except the number of leaves. Under ambient UV-B, the growth performance of summer spinach was better in both the NPK levels, higher being at 1.5 RNPK leading to higher nutrient uptake. However, more reduction in biomass under elevated UV-B in 1.5 RNPK was recorded during summer, while during winter in RNPK. Reduction in biomass under elevated UV-B was accompanied by the modification in its partitioning with more biomass allocation to root during summer compared to winter at both the NPK levels. NPK uptake was higher in summer, while NPK use efficiencies were higher during winter. At higher than recommended NPK level, better NPK use efficiencies were displayed during both the seasons. Increased NPK supply during winter enabled spinach to capitalize light more efficiently and hence increased biomass accumulation. Strategies for surviving elevated UV-B in winter differ from those that provided protection from the same stress when it occurs in summer.     

Influence of microbial and synthetic surfactant on the biodegradation of atrazine

The present study reports the effect of surfactants (rhamnolipids and triton X-100) on biodegradation of atrazine herbicide by strain A6, belonging to the genus Acinetobacter. The strain A6 was able to degrade nearly 80 % of the 250-ppm atrazine after 6 days of growth. The bacterium degraded atrazine by de-alkylation process. Bacterial cell surface hydrophobicity as well as atrazine solubility increased in the presence of surfactant. However, addition of surfactant to the mineral salt media reduced the rate and extent of atrazine degradation by decreasing the bioavailability of herbicide. On the contrary, addition of surfactant to atrazine-contaminated soil increased the rate and extent of biodegradation by increasing the bioavailability of herbicide. As compared to triton X-100, rhamnolipids were more efficient in enhancing microbial degradation of atrazine as a significant amount of atrazine was removed from the soil by rhamnolipids. Surfactants added for the purpose of hastening microbial degradation may have an unintended inhibitory effect on herbicide degradation depending upon contiguous condition, thus highlighting the fact that surfactant must be judiciously used in bioremediation of herbicides.