Biological impacts of ocean acidification: a postgraduate perspective on research priorities

Research into the effects of ocean acidification (OA) on marine organisms has greatly increased during the past decade, as realization of the potential dramatic impacts has grown. Studies have revealed the multifarious responses of organisms to OA conditions, indicating a high level of intra- and interspecific variation in species’ ability to accommodate these alterations. If we are to provide policy makers with sound, scientific input regarding the expected consequences of OA, we need a broader understanding of these predicted changes. As a group of 20 multi-disciplinary postgraduate students from around the globe, with a study focus on OA, we are a strong representation of ‘next generation’ scientists in this field. In this unique cumulative paper, we review knowledge gaps in terms of assessing the biological impacts of OA, outlining directions for future research.     

The physiological and molecular responses of larvae from the reef-building coral Pocillopora damicornis exposed to near-future increases in temperature and pCO2

Given the threats of greenhouse gas emissions and a changing climate to marine ecosystems, there is an urgent need to better understand the response of not only adult corals, which are particularly sensitive to environmental changes, but also their larvae, whose mechanisms of acclimation to both temperature increases and ocean acidification are not well understood. Brooded larvae from the reef coral Pocillopora damicornis collected from Nanwan Bay, Southern Taiwan, were exposed to ambient or elevated temperature (25 or 29 °C) and pCO₂ (415 or 635 μatm) in a factorial experiment for 9 days, and a variety of physiological and molecular parameters were measured. Respiration and rubisco protein expression decreased in larvae exposed to elevated temperature, while those incubated at high pCO₂ were larger in size. Collectively, these findings highlight the complex metabolic and molecular responses of this life history stage and the need to integrate our understanding across multiple levels of biological organization. Our results also suggest that for this pocilloporid larval life stage, the impacts of elevated temperature are likely a greater threat under near-future predictions for climate change than ocean acidification.     

Species diversity variation of Cupressus funebris secondary forest in landslide site after 5.12 Wenchuan Earthquake北大核心CSCD

The characteristics of species diversity in Cupressus funebris secondary forest under the effect of geological hazard were explored by selecting the typical landslide surface of Fenghuang Mountain, Leigu Town, Beichuan County, which was derived from the 5.12 Wenchuan earthquake. The results showed that 93 species belonged to 42 families, and 78 genera were found in the landslide area, where the main families were Compositae, Leguminosae, and Gramineae-based. Further, 97 species in the transition area belonged to 39 families and 80 genera, and the main families were Compositae, Gramineae, and Rosaceae-based. In all, 108 species were recorded in the non-landslide area, which belonged to 59 families and 92 genera, the main families of which were Compositae, Rosaceae, and Gramineae-based. Compositae and Gramineae played important roles in the landslide recovery process after earthquake. The Pielou index (JSW) was the highest in the non-landslide area of the herb layer, whereas the richness index (D) was the lowest; the Shannon-Wiener index (H) and Simpson index (H') showed medium values. In the non-landslide area, the D, H, and H' were the highest in the shrub layer, whereas the JSW was the lowest. Further, the species diversity index of the transitional area was higher than that of the landslide area. In the tree layer, the D and H were both the highest and lowest in the landslide area and transition area, respectively. In contrast, the H' and JSW were the highest in the transition area and the lowest in the non-landslide area. The distribution of vegetation was generally consistent with the distribution of soil nutrients in the spatial distribution of surface soil nutrients. The succession of trees in the landslide area was relatively slow and at the initial stage, and the pioneer species were Coriaria nepalensis, Leptopus chinensis, and Arthraxon lanceolatus in this area. Taken together, the findings suggested that the stability of a plant community can be increased by improving the soil and stabilizing the slope. © 2018 Science Press. All rights reserved.     

Recent advances in three typical configurations and applications of bioelectrochemical systems北大核心CSCD

As the world's freshwater resources and available energy are alarmingly decreasing, the bioelectrochemical system (BES) is a cutting-edge technology for the resolution of the resource and energy issue. Researchers have paid much attention to t he application of t he BES configuration. Based on t he brief i ntroduction of m icrobial f uel cell a nd m icrobial electrolytic cell structure, principles, and domestic and foreign research, the BES and its influencing factors are introduced, specifically including: microbial activity, electrode materials, and configuration. Three important aspects (i.e., the electrode chamber, the reaction chamber, and micro-sensor) are summarized, and the advantages and disadvantages of single-electrode and multi-electrode chambers are compared, based on the microbial desalination cell. Microbial electrolysis desalination cell: Microbial electrolysis desalination and chemical-production cell have been discussed to introduce increasing reaction chamber configuration; this review focuses on the research of BES monitoring with regards to biochemical oxygen demand. The potential applications of the research progress are explored. The results show that the configuration of multi-chamber microbial fuel cell is complex and its efficiency is low, while the single chamber configuration is advantageous. The reaction chamber added is mainly aimed at desalination, and the study of the desalination pool still needs to be focused on optimizing the cation exchange membrane to maintain the anode pH balance and reduce the air cathode dissolved oxygen. Microbial electrode sensor can be applied in more areas, and its sensitivity and long-term stability need to be further improved. However, there is relatively less research on the abundance and activity of electricigen communities; the configurations and scopes of application of BES are still the research priority. © 2018 Science Press. All rights reserved.     

Changes in CO2 flux for different recovery processes of desertification in the alpine meadows of Northwest Sichuan北大核心CSCD

Desertification has emerged as a serious threat to the alpine meadows of Northwest Sichuan in recent decades. Artificial vegetation had certain effects on desertification recovery, while how the CO2 flux changed and its reasons are still unclear. During the growing season in 2016 (i.e., from July to September), we selected the desertified alpine meadows with different recovery degrees, including the early stage of restoration, the middle stage of restoration, the late stage of restoration, and control (the unrecovered desertification meadow) as four transects. CO2 flux was measured by the instrument LI-8100, and the microenvironment factors that affected CO2 flux changes were analyzed. The results showed that the carbon sequestration function of desertified alpine meadows gradually increased with the degree of recovery. Net ecosystem exchange (NEE) were -1.61, -3.55, and -4.38 μmol m-2 s-1 in the early, mid-term, and late transects, respectively, and the most dramatic changes occurred from the early stage to mid-term stage, increasing by 120.50%. Both ecosystem respiration (ER) and soil respiration (SR) were enhanced significantly with restoration (P < 0.05). In mid or late July, NEE, ER, and SR reached their maximum values, and thereafter, the indicators varied to near zero (P < 0.05). During the whole growing season, the daily dynamic in CO2 flux for the control alpine meadow was mild and retained the trend of continuous release all day, but that in the desertified alpine meadow was a single peak pattern. Moreover, with restoration process, the peak of CO2 flux increased and reached a peak in the late stage of the recovery process. The regression analysis showed that there was a significant positive correlation between CO2 flux and vegetation coverage, aboveground biomass, and soil moisture (0-5 cm) (P < 0.01), and a weak correlation with 0-5-cm soil temperature (P < 0.01). This indicates that topsoil moisture (5 cm) is a more significant factor for CO2 flux than topsoil temperature during the growing season in the restoration of desertified alpine meadows in Northwest Sichuan. In general, the vegetation recovery significantly improved the carbon-sequestration ability of the desertified alpine meadows during the growing season in Northwest Sichuan, and at the middle stage of restoration, the carbon-sequestration ability improved significantly due to vegetation restoration and increase in topsoil (0-5 cm) moisture. © 2018 Science Press. All rights reserved.     

Effects of different endogenous fungi on the mass loss and nutrient content of leaf litter of Cunninghamia lanceolata北大核心CSCD

To explore the role of endophytic fungi in the decomposition of litter, the endophytic fungi Penicillium sp. strain CG2 (A), Fusarium flavum strain AY13 (B), and Talaromyces strain AJ14 (C) of Cunninghamia lanceolata were added to experimental pots in different forms (mycelium, sterilized fermentation broth, single fungus, and mixed fungi), and a control treatment (CK) was set up (no fungi added). At 10, 30, 60, 90, and 120 days after litter decomposition, a study on the decomposition dynamics of C. lanceolata litter under different treatments was performed. The results showed that the rate of leaf mass loss was the highest in the sterilized fermentation broth treatment A after 120 days, and that there was a significant difference (P < 0.05) between the mycelium treatment AC and the control treatment after 60 days (23.97% higher than the control group). On day 60, the litter carbon content from the mycelium treatment A was significantly different from that of the control (P < 0.05), showing a 16.74% lower value, whereas the litter carbon content of the mycelium treatment B was 21.13% lower than that of the control after 90 days. The nitrogen content of the litters of most mycelium and sterilized fermentation broth treatments was increased compared to that of the control group; there was significant difference (P < 0.05) between the sterilized fermentation broth treatment A and the control (P < 0.05), with a 17.05% higher value than that of the control. Similar to nitrogen, the litter phosphorus content also increased; there was a statistically significant difference between the mycelium treatment A and the control group, with treatment A showing a 46.67% higher value than the control group. The potassium content was 28% lower than that of the control group under the sterilized fermentation broth treatment C, a result that was significantly different from that of the control group (P < 0.05). After treatment for 90 days, the ratio of carbon to nitrogen was the lowest under the treatments with the mycelium A and the mycelium B, with values 25.54% and 25.11% lower than that of the control group, respectively, and a statistically significant difference from that of the control group (P < 0.05). The ratio of carbon to phosphorus was the lowest under the treatment with mycelium A after 60 days, and the result was significantly different from that of the control (P < 0.05), with a 43.05% lower value than the control. Thus, the three endophytic fungi had different effects on the mass loss rate and nutrient content of the litter. The Penicillium sp. strain CG2 (A) had statistically significant effects on the mass loss and nutrient content of leaf litter, which was within the range of fungi fertilizer reference values for the breeding of C. lanceolata. © 2018 Science Press. All rights reserved.     

Population structure and community characteristics of Acer catalpifolium Rehd北大核心CSCD

Acer catalpifolium Rehd., a critically endangered tree species with an extremely limited range of distribution, is one of the 120 plant species with extremely small populations, as approved by the state forestry administration of the People's Republic of China and requires urgent rescue action. In order to comprehensively understand the population status and the future developmental trend of A. catalpifolium, the plant communities were investigated from 5 sites, including Caishenmiao (CSM), Banruosi (BRS), Zhangshancun (ZSC), Fuhusi (FHS), and Baoguosi (BGS). The population structure of A. catalpifolium as well as the species composition and community characteristics of its habitat were investigated. The results showed that A. catalpifolium is mainly distributed in the evergreen broad-leaved and deciduous broad-leaved mixed forests, in different community layers, namely, the tree layer, shrub layer, and herb layer, and is accompanied by 52, 74, and 52 plant species, respectively. Analyses of the distribution of population abundance revealed that BRS had the largest distribution of A. catalpifolium, accounting for 26.04% of the total population, followed by FHS, ZSC, BGS, and CSM, in that order. Analyses of the community characteristics revealed that the species diversity indices in FHS, BRS, BGS, and CSM were greater than that in ZSC. Analyses of the population age structure of A. catalpifolium revealed the gap in the distribution of the levels of seedlings and young trees. There were serious obstacles to the regeneration of the natural population. We concluded that the obstacle to the regeneration of the population of A. catalpifolium might be caused by the high competitive pressure from the dominant species and the micro-environment in the forest. Understanding the community characteristics and the population structure of A. catalpifolium could provide a theoretical foundation for its reintroduction and recovery. © 2018 Science Press. All rights reserved.     

Effects of water velocity on bulk water quality and biofilm population structure in drinking water distribution systems北大核心CSCD

To study the effect of flow velocity on drinking water distribution systems, bulk water quality was monitored over 28 days, biomass was measured, and 16S rDNA was sequenced on the 28th day using a water distribution simulation system. The relationship between bulk water quality and biofilm was statistically analyzed. Flow velocity of 0.5 m/s yielded the most total organic carbon (TOC) (5.26 ± 0.17 mg/L) in the bulk water, the most bulk water bacteria (lg (n+1/mL-1) = 4.79 ± 0.02), the worst bulk water quality, and the most biofilm bacteria (lg (n+1/cm-2) = 5.48 ± 0.06). A Pearson correlation analysis showed the total number of biofilm bacteria was positively correlated with conductivity (R = 0.73, P < 0.01), turbidity (R = 0.87, P < 0.001), TOC (R = 0.94, P < 0.001), and total bacteria (R = 0.92, P < 0.001), and was negatively correlated with residual chlorine (R = -0.68, P < 0.05). Biofilm diversity was high under the low (0.1 m/s) and high (2.5 m/s) flow rates, but the bacterial diversity of biofilm was the lowest at the 0.5 m/s flow rate, in which Proteobacteria dominated the biofilm community structure. These results suggest that flow velocity affects bulk water quality and biofilm population structure, and water quality and biofilm population structure are interrelated, which provides the theoretical basis for research on biofilms in drinking water distribution systems. © 2018 Science Press. All rights reserved.     

Heterologous overexpression of Populus euphratica BAK1;1 gene enhanced resistance to Pst DC3000 in tobacco北大核心CSCD

BRI1-ASSOCIATED RECEPTORKINASE1(BAK1), a leucine-rich repeat (LRR) receptor protein kinase, plays a significant role in brassinosteroid (BR) signaling. Furthermore, it combines with other LRR-RLKs protein to initiate immune response in plants. The objective of this study was to (1) investigate the function of the Populus euphratica BAK1;1 gene in the resistance of transgenic tobacco to Pseudomonas syringae pv. tomato DC3000 (Pst DC3000) and (2) discuss the regulation pathway of PeBAK1;1 involved in the resistance to plant pathogen. We cloned the cDNA sequence of the P. euphratica PeBAK1;1 gene, constructed the pBI121-35S::PeBAK1;1 over-expression vector, and then transformed it into wild-type tobacco by Agrobacterium-mediated transformation to obtain PeBA K 1;1-overexpressing transgenic tobacco plants. The bioinformatic analysis showed that the PeBAK1;1 protein contained all the structural features of the plant SERK family. The phylogenetic tree showed that PeBAK1;1 has the highest sequence homology with PtBAK1. The gene expression profile results indicated that the expression of PeBAK1;1 in the root was higher than that in the leaf and stem. The wild-type tobacco plants showed an obvious susceptibility to Pst DC3000, whereas the transgenic plants exhibited enhanced resistance to Pst DC3000. Compared with that of the wild-type (WT), the real-time PCR and quantitative real-time PCR analysis revealed that the expression of pathogenesis-related genes (including PR1, PR3, PR4, and PR5), BAK1-interacting receptor kinase 1 gene, and BONZAI1 gene was upregulated in 35S::PeBAK1;1 transgenic tobacco plants. In conclusion, the PeBAK1;1 gene plays a positive regulatory role in 35S::PeBAK1;1 transgenic tobacco against Pst DC3000, which can enhance the resistance of plants to pathogen. © 2018 Science Press. All rights reserved.     

Tolerance of the black soldier fly,Hermetia illucens (Diptera: Stratiomyidae) to pH value,pungency, and NaCl in foodstuffs北大核心CSCD

The black soldier fly (BSF), Hermetia illucens, has been considered impressive as a saprophagous insect, for its high ability to convert organic waste to insect protein and oil. Hence, it has been regarded by the municipal administration that BSF might be used as a medium to deal with food waste. However, food waste in China has been characterized as having a high salt content, oily, and very spicy, which usually renders them unsuitable for animal feeding. In order to assess the technological reliability for BSF conversion of food waste, the tolerance of BSF for pH values, pungency, and NaCl in food were investigated in this case. Results indicated that strong acidity (pH = 3) was not good for the development of BSF, demonstrating less body weight and eclosion failure. In contrast, strong basicity (pH = 11) seemed to be beneficial for larval development with high biomass, and there is no difference in pupation, eclosion, larval biomass, and livability for BSF for pH values between 5 and 11. With regards to salinity, liner correlations were observed; the salinity strength increased along with the extension of the larval phase, but body weight, pupation rate, emerging rate, and livability were still consistent under 6% density of salinity. Influence of pungency on BSF larvae has not yet been found. In conclusion, BSF showed a high tolerance to pH value, pungency, and salinity in foodstuffs. Hence, it is expected that food waste from common environments might have a lesser possibility to cause negative effects on BSF development, which could be good news for BSF conversion technology. As for the process design, the conclusion suggested that food waste optimum for BSF is expected to be alkaline and low-salt, which would be helpful to improve the efficiency and harvest. © 2018 Science Press. All rights reserved.