First in vitro use of the phenylphosphate carboxylase enzyme in supercritical CO2 for the selective carboxylation of phenol to 4-hydroxybenzoic acid

A new biotechnological synthetic approach to 4-hydroxybenzoic acid is reported. Thauera aromatica cells produce the phenylphosphate carboxylase enzyme that selectively carboxylates phenylphosphate in the para position, without any formation of the ortho isomer. Here we show that the enzyme also works in supercritical carbon dioxide, opening a new technological solution to the recovery of the products that is a key problem when aqueous media are used. The enzyme shows an activity comparable with that shown under CO₂ pressure in aqueous media and does not require the presence of NaHCO₃.     

Agrobacterium-mediated transformation of Nicotiana attenuata, a model ecological expression system

Summary. Research into the genetic basis of the ecological sophistication of plants is hampered by the availability of transformable systems with a wealth of well-described ecological interactions. We present an Agrobacterium-mediated transformation system for the model ecological expression system, Nicotiana attenuata, a native tobacco that occupies the post-fire niche in the Great Basin Desert of North America. We describe a transformation vector and a transformation procedure that differs from the standard cultivated tobacco transformation protocols in its use of selectable markers, explants, media and cultivation conditions. We illustrate its utility in the transformations with genes coding for key enzymes in the oxylipin cascade (lipoxygenase, allene oxide synthase, hydroperoxide lyase) in antisense orientations and present high-throughput screens useful for the detection of altered phenotypes for the oxylipin cascade (green leaf volatiles and jasmonic acid after wounding). Received 14 March 2002; accepted 10 May 2002     

Spectroscopic tools for remote sensing of greenhouse gases CH<Subscript>4</Subscript>, CF<Subscript>4</Subscript> and SF<Subscript>6</Subscript>

Highly symmetrical molecules such as CH₄, CF₄ or SF₆ are known to be atmospheric pollutants and greenhouse gases. High-resolution spectroscopy in the infrared is particularly suitable for the monitoring of gas concentration and radiative transfers in the earth's atmosphere. This technique requires extensive theoretical studies for the modeling of the spectra of such molecules (positions, intensities and shapes of absorption lines). Here, we have developed powerful tools for the analysis and the simulation of absorption spectra of highly symmetrical molecules. These tools have been implemented in the spherical top data system (STDS) and highly-spherical top data system (HTDS) software available at http://www.u-bourgogne.fr/LPUB/shTDS.html. They include a compilation of modeled data obtained during the last 20 years. An overview of our latest results in this domain will be presented. Electronic Publication     

Plant-trait-based modeling assessment of ecosystem-service sensitivity to land-use change

Evidence is accumulating that the continued provision of essential ecosystem services is vulnerable to land-use change. Yet, we lack a strong scientific basis for this vulnerability as the processes that drive ecosystem-service delivery often remain unclear. In this paper, we use plant traits to assess ecosystem-service sensitivity to land-use change in subalpine grasslands. We use a trait-based plant classification (plant functional types, PFTs) in a landscape modeling platform to model community dynamics under contrasting but internally consistent land-use change scenarios. We then use predictive models of relevant ecosystem attributes, based on quantitative plant traits, to make projections of ecosystem-service delivery. We show that plant traits and PFTs are effective predictors of relevant ecosystem attributes for a range of ecosystem services including provisioning (fodder), cultural (land stewardship), regulating (landslide and avalanche risk), and supporting services (plant diversity). By analyzing the relative effects of the physical environment and land use on relevant ecosystem attributes, we also show that these ecosystem services are most sensitive to changes in grassland management, supporting current agri-environmental policies aimed at maintaining mowing of subalpine grasslands in Europe.     

Resource availability and the abundance of an N-based defense in Australian tropical rain forests

Plant defense theories predict that relatively resource-rich environments (those with more fertile soil) will support a greater abundance of plants with nitrogen-based chemical defense, but this has yet to be adequately tested. We tested this prediction by measuring the diversity and contribution to total biomass of cyanogenic plants (those that release hydrogen cyanide from endogenous cyanide-containing compounds) in the Australian tropical rain forest. We examined 401 species in thirty 200-m2 plots, six at each of five sites, for cyanogenesis. In upland/highland rain forest, two pairs of sites similar in rainfall and altitude, but differing in soil nutrients, were selected, as well as one site in lowland rain forest. Sites differed markedly in species composition and foliar N was positively related to soil fertility. Holding altitude constant, we did not detect significant differences in the proportion of cyanogenic species with soil fertility, nor did we consistently detect significant increases in the contribution of cyanogenic species to total biomass on higher nutrient sites. Thus we found no clear evidence that soil fertility affects the distribution and prevalence of species investing in a constitutive N-based defense at the community level.     

Habitat-mediated variation in predation risk by the American marten

The probability of prey encounter, attack, capture, and kill are often hypothesized to depend on habitat structure, but field evidence in terrestrial systems is rare. We tested whether predation efficiency by the American marten (Martes americana) and fear of predation by their primary prey, the red-backed vole (Clethrionomys gapperi), differed between 20- to 50-year-old regenerating forest stands and older uncut stands. Our results showed that the frequency of prey encounter, prey attack, and prey kill were higher in old uncut forests, despite the fact that small-mammal density was similar to that in younger logged forests. These differences in predation efficiency were linked to higher abundance of coarse woody debris, which seems to offer sensory cues to martens, thereby increasing the odds of hunting success. Red-backed voles in regenerating forest stands exhibited increased wariness compared to voles living in old uncut forest, suggestive of a behavioral response to habitat-mediated variation in predation risk.