Trace elements accumulation and their variations with growth, sex and habitat: effects on Formosan squirrel (Callosciurus erythraeus)

Formosan squirrels are considered a useful bio-indicator because their habitat exists within that of humans. Therefore, concentrations of 19 trace elements were determined in tissues of this species for assessment of environmental pollution in urban Kamakura and rural Izuohshima. Results of analyses revealed high Cu concentrations in the livers of Formosan squirrels. Moreover, concentrations of some trace elements from automobile exhausts-V, Zn, Cu and As-in the specimens from Kamakura were higher than those from Izuohshima. These results reflect the presence of pollution caused by human activities in Kamakura.     

Dangerous levels of climate change for agricultural production in China

There are increasing attempts to define the measures of ‘dangerous anthropogenic inference with the climate system’ in context of Article 2 of the Framework Convention on Climate Change, due to its linkage to goals for stabilizing greenhouse gas concentrations. The criteria for identifying dangerous anthropogenic interference may be characterized in terms of the consequences of climate change. In this study, we use the water stress index (WSI) and agricultural net primary production (NPP) as indictors to assess where and when there might be dangerous effects arising from the projected climate changes for Chinese agricultural production. The results showed that based on HadCM3-based climate change scenarios, the region between the North China Plain and Northeast China Plain (34.25–47.75°N, 110.25–126.25°E) would be vulnerable to the projected climate change. The analyses on inter-annual variability showed that the agricultural water resources conditions would fluctuate through the period of 2001–2080 in the region under IPCC SRES A2 scenario, with the period of 2021–2040 as critical drought period. Agricultural NPP is projected to have a general increasing trend through the period of 2001–2080; however, it could decrease during the period of 2005–2035 in the region under the IPCC SRES A2 scenario, and during the period of 2025–2035 under IPCC SRES B2 scenario. Generally, while projected climate change could bring some potentially improved conditions for Chinese agriculture, it could also bring some critical adverse changes in water resources, which would affect the overall outcome. At this stage, while we have identified certain risks and established the general shape of the damage curve expressed as a function of global mean temperature increase, more works are needed to identify specific changes which could be dangerous for food security in China. Therefore, there is a need for the development of more integrated assessment models, which include social-economic, agricultural production and food trade modules, to help identify thresholds for impacts in further studies.     

Integrated model of reaction rate equations and thermal energy balance in aerobic bioreactor for food waste decomposition

The integrated model is composed of two basic parts: one is a reaction rate model of biodegradation in combination with bioenergetics and the other is a thermal engineering model of energy flow and balance in the bioreactor. Integrating these models provides possibility to estimate microbial activity using time course of physicochemical parameters such as bed temperature, bed weight, and/or C0₂ concentration during decomposition.     

Numerical modeling of diazinon transport through inter-row vegetative filter strips

A numerical simulation model of pesticide runoff through vegetative filer strips (PRVFS) was developed as a tool for investigating the effects of pesticide transport mechanisms on VFS design in dormant-sprayed orchard. The PRVFS model was developed applying existing theories such as kinematic wave theory and mixing zone theory for pesticide transport in the bare soil area. For VFS area, the model performs flow routing by simple mass accounting in sequential segments and the pesticide mass balance by considering pesticide washoff and adsorption processes on the leaf, vegetative litter, root zone and soil. Model sensitivity analysis indicated that pesticide transfer from surface soil to overland flow and pesticide washoff from the VFS were important mechanisms affecting diazinon transport. The VFS cover ratio and rainfall intensity can be important design parameters for controlling diazinon runoff using inter-row VFS in orchard. The PRVFS model was validated using micro-ecosystem simulation of diazinon transport for 0, 50 and 100% VFS cover conditions. The PRVFS model is shown to be a beneficial tool for evaluating and analyzing possible best management practices for controlling offsite runoff of dormant-sprayed diazinon in orchards during the rainy season.     

Sensitive monitoring of iodine species in sea water using capillary electrophoresis: vertical profiles of dissolved iodine in the Pacific Ocean

Using a novel high-sensitivity capillary electrophoretic method, vertical distributions of iodate, iodide, total inorganic iodine, dissolved organic iodine and total iodine in the North Pacific Ocean (0-5500 m) were determined without any sample pre-treatment other than UV irradiation before total iodine analysis. An extensive set of data demonstrated that the iodine behaviour in the ocean water collected during a cruise in the North Pacific Ocean in February-March 2003 was not conservative but correlated with variations in concentrations of dissolved oxygen and nutrient elements such as silicon, nitrogen and phosphorus. This suggests that the vertical distribution of iodine is associated with biological activities. The dissolved organic iodine was found in the euphotic zone in accord with observations elsewhere in the oceans. The vertical profile of dissolved organic iodine also appears to be related to biogeochemical activity. The concentrations of all measured iodine species vary noticeably above 1000 m but only minor latitudinal changes occur below 1000 m and slight vertical alterations can be observed below 2400 m. These findings are thought to reflect the stratification of nutrients and iodine species with different biological activities in the water column.     

Concentrations of organic wood preservatives in wood chips produced from wood wastes

We investigated the concentrations of wood preservatives in the wood chips produced in wood-waste processing facilities in 1988, 1998–1999, and 2001–2002. Among the wood preservatives used in the past in Japan, halophenols, including PCP, chlordane, and chlorpyrifos, had comparatively high detection rates and high average concentrations in the wood chips produced in 2001–2002. Aldrin and endrin were rarely detected, and DDT was already in low concentrations in those wood chips. Although several types of wood preservative were contained in the wood chips, their concentration levels depended on the sources of the wood wastes. In chips produced from wooden pallets, wooden forms for concrete working, or wood discarded from nondemolition sources, no organochlorine wood preservatives were detected, and chlorpyrifos and chlorophenols were detected at one order of magnitude lower than the average concentrations in chips produced from wood wastes discarded in house demolitions.     

Aerosol Number Concentrations during Kosa Events on Suburban Hills in Japan

Measurements of aerosol size-separated number concentrations were performed in March 2001 on the Tama Hills of Japan, located near regions of heavy industry. The concentrations of particles larger than 1.0 μ m in diameter dramatically increased during the Kosa phenomena on 6–8 and 18–24 March. The number concentrations of coarse particles (> 3.0 μm) showed distinct diurnal variations, especially during the Kosa events. Fine particles smaller than 0.5 μm increased when the relative humidity was high and the wind speed was low. On the other hand, the coarse particles concentrations were well correlated with wind speed and temperature. The dry deposition velocity of the coarse particles at the forest canopy was estimated from the nighttime decrease in the number concentrations.     

Viral Interference as a Factor of False-Negative in the Infectious Adenovirus Detection Using Integrated Cell Culture-PCR with a BGM Cell Line

Food and Environmental Virology - This study investigated the influence of viral interference on the detection of enteric viruses using the integrated cell culture (ICC)-PCR with a BGM cell line....     

Identifying a breeding habitat of a critically endangered fish, <Emphasis Type="Italic">Acheilognathus typus</Emphasis>, in a natural river in Japan

Freshwater biodiversity has been severely threatened in recent years, and to conserve endangered species, their distribution and breeding habitats need to be clarified. However, identifying breeding sites in a large area is generally difficult. Here, by combining the emerging environmental DNA (eDNA) analysis with subsequent traditional collection surveys, we successfully identified a breeding habitat for the critically endangered freshwater fish Acheilognathus typus in the mainstream of Omono River in Akita Prefecture, Japan, which is one of the original habitats of this species. Based on DNA cytochrome B sequences of A. typus and closely related species, we developed species-specific primers and a probe that were used in real-time PCR for detecting A. typus eDNA. After verifying the specificity and applicability of the primers and probe on water samples from known artificial habitats, eDNA analysis was applied to water samples collected at 99 sites along Omono River. Two of the samples were positive for A. typus eDNA, and thus, small fixed nets and bottle traps were set out to capture adult fish and verify egg deposition in bivalves (the preferred breeding substrate for A. typus) in the corresponding regions. Mature female and male individuals and bivalves containing laid eggs were collected at one of the eDNA-positive sites. This was the first record of adult A. typus in Omono River in 11 years. This study highlights the value of eDNA analysis to guide conventional monitoring surveys and shows that combining both methods can provide important information on breeding sites that is essential for species’ conservation.     

Phylogeny and biogeography of Sicydiinae (Teleostei: Gobiidae) inferred from mitochondrial and nuclear genes

In the Indo-Pacific area, the Caribbean region and West Africa, insular systems are colonised by particular Gobiids of the Sicydiinae subfamily. These species spawn in freshwater, the free embryos drift downstream to the sea where they undergo a planktonic phase, before returning to rivers to grow and reproduce; an amphidromous lifestyle. These gobies are the biggest contributors to the diversity of fish communities in insular systems and have the highest levels of endemism, yet their phylogeny has not been explored before with molecular data. To understand the phylogeny and the biogeography of this subfamily, sequences from the mitochondrial 16S rDNA and cytochrome oxidase I and from the nuclear rhodopsin gene were obtained for 50 Sicydiinae specimens of seven genera. Our results support the monophyly of the subfamily and of all the genera except Sicyopus, which is polyphyletic. Five major clades were identified within this subfamily. One clade clusters Sicyopterus and Sicydium as sister genera, one contains the genus Stiphodon split into two different groups, two other clades include only Sicyopus (Smilosicyopus) and Cotylopus, respectively, and the last clade groups Akihito, Lentipes and Sicyopus (Sicyopus). As a result, the subgenus Smilosicyopus is elevated herein as a genus. A molecular dating approach helps the interpretation of these phylogenetic results in terms of amphidromy and biogeographical events that have allowed the Sicydiinae to colonise the Indo-Pacific, West African and Caribbean islands.