A molecular fingerprint technique to detect pollution-related changes in river cyanobacterial diversity

Humans now have a strong influence on almost every major aquatic ecosystem, and our activities have dramatically altered the quality of receiving waters worldwide. Thus, there is a continuous need to develop and apply novel and effective technologies to detect, manage, and correct human-induced degradation of aquatic systems. In the present work, we evaluated the molecular approach using polymerase chain reaction (PCR)-temperature gradient gel electrophoresis (TGGE) to measure changes in cyanobacterial diversity along a pollution gradient in a river and compared it with that of using microscopic observations of field-fixed and cultured samples. The different 16S rDNA genes present in the cyanobacterial community of each sampling point of the river were separated by TGGE, giving a characteristic pattern of bands for each site. This pattern represents a "fingerprint" of the community, allowing direct comparisons of the different samples. The TGGE results revealed that the structure of the cyanobacterial community differed along the pollution gradient of the river. Microscopic and molecular approaches showed that cyanobacterial diversity decreased in a downstream direction. Similar results were obtained by the two methods, as indicated by the high correlation between them. We suggest PCR-TGGE could be a useful and rapidly applied technique for the routine analysis of changes in cyanobacterial diversity in response to pollution, which would allow us to monitor rivers in surveillance networks of watercourse quality.     

Characterization of surface marine sediments from Ría de Arousa estuary according to extractable humic matter content

Surface marine sediments from Ría de Arousa estuary were analyzed for humic and fulvic acids by UV-visible spectrometry and have been characterized using elemental analysis (carbon, hydrogen and nitrogen elemental composition) and spectrometric data (A2/A4 ratio, absorbancies at 270 and 407 nm and E4/E6 ratio, absorbancies at 465 and 665 nm). These variables have been used as discriminating factors to distinguish of marine and terrestrial origin of humic and fulvic acids in Ría de Arousa surface marine sediments. Principal component analysis, PCA, and cluster analysis, CA, have been used as unsupervised pattern recognition procedures. The half-range central value transformation was used as data pre-treatment to homogenize data. After a Varimax rotation, PCA applied to humic acid data has reveled that spectrometric A2/A4 and E4/E6 ratios are the main dominating features in the first principal component (48.6% of total variance), the humic acid content is the feature with the highest weight in the second principal component (22.9% of the total variability) and the carbon elemental composition domain in the third principal component (13.3% of total variance). Results from PCA have revealed that surface sediments collected at inner-left part of the estuary and at the mouth of the river Ulla belong to the same group. Similarly, PCA has shown that surface sediments from the right mouth of the estuary form a compact group. Taking in account the water circulation in Ría de Arousa estuary, these findings mean that the organic matter in surface sediments from the inner-left part of the estuary derived mainly from terrestrial organic matter while the organic matter in surface sediments from the right mouth of the estuary is mainly derived from marine sources. Finally, it must be noticed that any classification of surface sediments was assessed when applying of PCA and CA from fulvic acids data.     

The impact of a disused mine on uranium transport in the River Fal, South West England

Unfiltered and filtered (0.45 and 0.2 microm) water samples and sediment samples (sieved to <180 microm and 180-1000 microm) were collected along an approximately 15 km transect of the River Fal, Cornwall, UK, to examine the impact of the disused South Terras uranium mine on the uranium concentrations of the river water and underlying sediments. The uranium concentration of the water samples fluctuated along the river, with the 0.45 microm filtered water showing the largest, seven-fold, difference between minimum (0.19 microg L(-1)) and maximum (1.34 microg L(-1)) concentrations. The historical uranium mine and spoil heaps were not a significant source of uranium to the river water, as water concentrations were low next to the site, but a highly elevated uranium concentration (1000 mg kg(-1)) was found in sediment below an outflow pipe from this mine. Operationally defined "colloidal" (0.2-0.45 microm) and "dissolved" (<0.2 microm) uranium were the predominant forms of the element in the river water (35 and 45% respectively). The uranium concentration in the dissolved phase showed a correlation coefficient of 0.83 (n= 9) with the total cation concentration, suggesting that the uranium concentration in this fraction is directly linked to weathering of rocks and minerals. The observation that weathering is the dominant mechanism delivering uranium to the river water explains the low uranium concentrations in the river water close to South Terras mine, despite the proximity of the spoil heaps, and the maximum uranium concentrations close to a china clay mining area.     

Spatial and Temporal Comparison of Polycyclic Aromatic Hydrocarbons and Spheroidal Carbonaceous Particles in Remote European Lakes

Spheroidal carbonaceous particles (SCP) and polycyclicaromatic hydrocarbons (PAH) have been measured in the dated sediment cores of 10 remote lakes distributed across Europe. The geographic trends were evaluated by examination of the superficial sediment fluxes and total sediment inventories. The highest levels of both markers were observed in the Eastern European lakes whereas the minimal values corresponded to the lake located in the Arctic. However, this SCP-PAH correlation was not observed after exclusion of the end member lakes from the series. The temporal trends of both pollutant markers are consistent with the history of pyrolytic emissions over Europe. However, the downcore SCP distributions are shorter than the PAH profiles in nearly all lakes. The differences are probably related to the different size particle fractions involved in the measurement of each marker, >5 and >1 m for SCP and PAH, respectively. Thus, the two proxies probably reflect pollution inputs from closer (SCP) and more distant sites (PAH).     

Microbial Source Tracking Analysis Using Viral Indicators in Santa Lucía and Uruguay Rivers,Uruguay

The aim of this study was to determine the origin (human, bovine or porcine) and the concentration of the fecal sources of contamination in waters from Santa Lucía basin and Uruguay River in Uruguay by using host-specific viral markers (adenoviruses and polyomaviruses) as microbial source tracking (MST). Between June 2015 and May 2016, monthly collections of surface water samples were performed in six sites in Santa Lucía basin and four sites in Uruguay River (n = 120 samples). Viral concentration was carried out using an absorption-elution method. Detection and quantification of human and porcine adenovirus (HAdV and PAdV, respectively) and human and bovine polyomavirus (HPyV and BoPyV, respectively) were performed by quantitative PCR (qPCR). To evaluate the infectivity of circulating HAdV, an integrated cell culture-qPCR (ICC-qPCR) was used. A logistic regression analysis was carried out to estimate the influence of environmental variables on the virus presence in surface waters. Overall, HAdV was the prevalent (18%; 21/120) followed by BoPyV (11%; 13/120) and HPyV (3%; 3/120), whereas PAdV was not detected in this study. The mean concentration ranged from 1.5 × 10⁴ genomic copies/L (gc/L) for HAdV to 1.8 × 10² gc/L for HPyV. Infective HAdVs were observed in two out of ten analyzed samples. A significant effect of environmental temperature (p = 0.001) and river (p = 0.012) on the presence of human viruses was found. These results suggest that fecal contamination could affect the water quality of these rivers, showing deficiencies in the procedure of sewage discharge from regional cities, livestock and dairy farms.

     

The value of open ocean ecosystems: A case study for the Spanish exclusive economic zone

Valuing goods and services from open oceans provides arguments for the ocean's protection and plays an increasingly important role in debates on the use and management of natural resources. This paper identifies and estimates the monetary value of some of the most important goods and services provided by open oceans. The list of goods and services considered includes food production, raw materials, water supply, CO₂ regulation, bioremediation of waste, biomass and biodiversity conservation. Therefore, not only values associated with productive uses are quantified but also values assigned to other biological ecosystem services. This paper constitutes a first attempt in the open ocean literature at evaluating services such as water supply, biomass and biodiversity conservation. To obtain their monetary value, different techniques, some not applied before in this area, have been used depending on the ecosystem service to be evaluated. As a general criterion we use the concept of net value added (revenues obtained from the services less incurred costs). Our methodology is illustrated by estimating the monetary values of goods and services provided by the open ocean ecosystem of Spain as defined by its exclusive economic zone. The total economic value obtained measures the contribution of oceans to overall welfare and it may be an important instrument in managing open ocean ecosystems and developing environmental policies in the future.     

Establishment Success of Coexisting Native and Exotic Trees Under an Experimental Gradient of Irradiance and Soil Moisture

The exotic trees Ailanthus altissima, Robinia pseudoacacia, Acer negundo and Elaeagnus angustifolia coexist with the native trees Fraxinus angustifolia and Ulmus minor in river banks of central Spain. Similarly, the exotic trees Acacia dealbata and Eucalyptus globulus co-occur with the natives Quercus pyrenaica and Pinus pinaster in Northwest Spain. We aimed to identify the environmental conditions that favour or hamper the establishment success of these species. In spring 2008, seeds of the studied species were sown under an experimental gradient of light (100, 65, 35, 7% of full sunlight) combined with three levels of soil moisture (mean soil water potential = −0.97, −1.52 and −1.77 MPa.). During the first growing season we monitored seed emergence and seedling survival. We found that the effect of light on the establishment success was stronger than the effect of soil moisture. Both exotic and native species of central Spain showed a good performance under high light, A. negundo being the most shade tolerant. Water shortage diminished E. angustifolia and A. altissima success. Among NW Spain species, A. dealbata and P. pinaster were found to be potential competitors for colonizing high-irradiance scenarios, while Q. pyrenaica and E. globulus were more successful under moderate shade. High soil moisture favoured E. globulus but not A. dealbata establishment. These results contribute to understand some of the factors controlling for spatial segregation between coexisting native and exotic tree species, and can help to take decisions orientated to the control and management of these exotic species.