Conservation Genetics of North American Freshwater Mussels Amblema and Megalonaias

Freshwater bivalves are among the most endangered groups of organisms in North America. Efforts to protect the declining mussel fauna are confounded by ambiguities associated with recognition of distinct evolutionary entities or species. This, in part, is due to the paucity of reliable morphological characters for differentiating taxa. We have employed allozymes and DNA sequence data to search for diagnosably distinct evolutionary entities within two problematic genera of unionid mussels, Amblema and Megalonaias. Within the genus Amblema three species are recognized based on our DNA sequence data for the mitochondrial 16S rRNA and allozyme data (Amblema neislerii, A. plicata, and A. elliotti). Only one taxonomically distinct entity is recognized within the genus Megalonaias—M. nervosa. Megalonaias boykiniana of the Apalachicolan Region is not diagnosable and does not warrant specific taxonomic status. Interestingly, Megalonaias from west of the Mississippi River, including the Mississippi, exhibited an allozyme and mtDNA haplotype frequency shift suggestive of an east-west dichotomy. The results of this study eliminate one subspecies of Amblema and increase the range of A. plicata. This should not affect the conservation status of "currently stable" assigned to A. plicata by Williams et al. (1993). The conservation status of A. elliotti needs to be reexamined because its distribution appears to be limited to the Coosa River System in Alabama and Georgia.     

Correlations between weather and recruitment of Nassarius pauperatus,an intertidal gastropod with a planktotrophic larval stage

Recruitment of the intertidal gastropod Nassarius pauperatus (Lamarck) was estimated annually for more than a decade at three sites in South Australia. Recruitment varied temporally, but was relatively synchronous amongst sites, even though these were at least 10 km apart. The density of recruits at each site was negatively correlated with evaporation and also with several indices of temperature for February. We postulate that either high temperatures or desiccation cause the death of recently settled individuals, which may be unable to avoid these extremes by burrowing deeply into the substratum.     

A field study of the toxicity of two oils and a dispersant to the mangrove Avicennia marina

The relative toxicities of Arabian Light crude oil, Tirrawarra crude oil, Dispersant BP-AB, and mixtures of oils and dispersant were assessed on 30 mangroves, Avicennia marina (Forsk.) Vierh. var. resinifera (Forst.) Bakh., in a coastal fringe on the eastern shore of Gulf St. Vincent, South Australia. Five treatments were applied: 100% Arabian Light crude oil, 100% Tirrawarra crude oil, Arabian Light crude oil plus dispersant (1:1), Tirrawarra crude oil plus dispersant (1:1) and 100% dispersant. Five mangroves were used for each of the treatments and five as controls. Defoliation, leaf damage, pneumatophore damage, flowering and fruiting were monitored for three years (September 1982–September 1985). Initially, the toxicity of both oils was increased by the addition of dispersant; Tirrawarra crude oil plus dispersant caused significant defoliation. 100% Tirrawarra crude oil was more toxic than 100% Arabian Light crude oil; the former caused significant leaf damage from Week 4 to Week 12 after treatment. After Week 49 production of new leaves was significantly greater in the Arabian Light crude oil plus dispersant treatment than with the Arabian Light crude oil. No such difference was found between the Tirrawarra treatments. Twelve to 26 weeks after treatment, partial pneumatophore damage was observed in all treatments. No atypical flower or fruit production was observed.     

In‐well sediment incubators to evaluate microbial community stability and dynamics following bioimmobilization of uranium

An in‐well sediment incubator (ISI) was developed to investigate the stability and dynamics of sediment‐associated microbial communities to prevailing subsurface oxidizing or reducing conditions. Herein we describe the use of these devices at the Old Rifle Uranium Mill Tailings Remedial Action (UMTRA) site. During a seven‐month period in which oxidized Rifle Aquifer background sediment (RABS) were deployed in previously biostimulated wells under iron‐reducing conditions, cell densities of known iron‐reducing bacteria, including Geobacteraceae, increased significantly, showing the microbial community response to local subsurface conditions. Phospholipid fatty acid (PLFA) profiles of RABS following in situ deployment were strikingly similar to those of adjacent sediment cores, suggesting ISI results could be extrapolated to the native material of the test plots. Results for ISI deployment with laboratory‐reduced sediments showed only slight changes in community composition and pointed toward the ability of the ISI to monitor microbial community stability and response to subsurface conditions. © 2009 Wiley Periodicals, Inc.     

Wool-waste as organic nutrient source for container-grown plants

A container experiment was conducted to test the hypothesis that uncomposted wool wastes could be used as nutrient source and growth medium constituent for container-grown plants. The treatments were: (1) rate of wool-waste application (0 or unamended control, 20, 40, 80, and 120 g of wool per 8-in. pot), (2) growth medium constituents [(2.1) wool plus perlite, (2.2) wool plus peat, and (2.3) wool plus peat plus perlite], and (3) plant species (basil and Swiss chard). A single addition of 20, 40, 80, or 120 g of wool-waste to Swiss chard (Beta vulgaris L.) and basil (Ocimum basilicum L.) in pots with growth medium provided four harvests of Swiss chard and five harvests of basil. Total basil yield from the five harvests was 1.6–5 times greater than the total yield from the unamended control, while total Swiss chard yield from the four harvests was 2–5 times greater relative to the respective unamended control. The addition of wool-waste to the growth medium increased Swiss chard and basil tissue N, and NO₃–N and NH₄–N in growth medium relative to the unamended control. Scanning electron microscopy (SEM) and energy dispersive X-ray (EDX) microanalysis of wool fibers sampled at the end of the experiments indicated various levels of decomposition, with some fibers retaining their original surface structure. Furthermore, most of the wool fibers’ surfaces contained significant concentrations of S and much less N, P, or K. SEM/EDX revealed that some plant roots grow directly on wool-waste fibers suggesting either (1) root directional growth towards sites with greater nutrient concentration and/or (2) a possible role for roots or root exudates in wool decomposition. Results from this study suggest that uncomposted wool wastes can be used as soil amendment, growth medium constituent, and nutrient source for container-grown plants.     

Factors Determining the Post-consumer Waste Recycling Burden

The environmental burden of collecting recoverables from households is generally omitted from life-cycle analyses comparing the environmental outcome of using secondary material from post-consumer waste (PCW) with virgin feedstock. However, this burden can be considerable, depending upon the characteristics of the collection methods employed. Given that the basic objective of recycling is to secure environmental benefits, it is vital that the burden of collection through both bring/dropoff and kerbside schemes is taken into account if a valid assessment of the environmental balance resulting from PCW recycling is to be made. This paper presents survey data comparing the burden of collection for different types of recycling provision. It describes the site and spatial characteristics determining the amount of transport dedicated to collection at bring/drop-off sites. Predictor variables are identified as measures of these characteristics, and the survey data compared with them. A regression model to assess energy use at bring/drop-off sites with varying characteristics is then developed. The potential uses of the techniques presented include the evaluation of the environmental burdens of recycling provision at the waste collection authority and regional level, allowing more informed choices to be made in the development of recycling provision from an environmental standpoint.     

How many color metrics do we need? Evaluating how different color-scoring procedures explain carotenoid pigment content in avian bare-part and plumage ornaments

For a variety of technical and conceptual reasons, biologists have come to use several different methods to quantify the colors of animals. However, the relative abilities of these different color-scoring procedures to capture variation in the actual color-generating mechanisms—pigment or structural composition of the integument—have never been tested systematically. Here, we examined which commonly employed color metrics predict carotenoid content of ornaments in three avian species (house finch Carpodacus mexicanus, mallard duck Anas platyrhynchos, and zebra finch Taeniopygia guttata). We used spectrophotometry to measure reflectance spectra from beak and feather tissue, calculated numerous color metrics (e.g., hue, chroma, brightness, principal components, and tetrahedral color space position) from these spectra, and determined carotenoid content at the site of color measurement with high-performance liquid chromatography. We found that several principal component, tristimulus, and avian visual model metrics significantly correlated with carotenoid content of house finch feathers and duck beaks. Carotenoid content of mallard beaks was most closely correlated with brightness and saturation metrics, whereas in house finch feathers, carotenoid concentration was best captured by hue and saturation metrics. According to tristimulus scores and visual models, we found that the ultraviolet portion of the spectrum was not an essential predictor of variation in carotenoid content. Also, visual model chromatic contrasts generally were not significant predictors of carotenoid content, although some achromatic contrasts and tetrahedral color space vector parameters were. Our results indicate that numerous methods, especially tristimulus scores, are suitable for capturing pigment-based color variation in two carotenoid-containing ornaments, and we discuss the merits and shortcomings of these different approaches. In contrast, there were no significant relationships between any color metrics and the carotenoid content of zebra finch beaks, suggesting that other color-generating mechanisms besides carotenoids may contribute to color variability in this species.     

Bayesian analysis of abundance for binomial sighting data with unknown number of marked individuals

The mark-resight method for estimating the size of a closed population can in many circumstances be a less expensive and less invasive alternative to traditional mark-recapture. Despite its potential advantages, one major drawback of traditional mark-resight methodology is that the number of marked individuals in the population available for resighting needs to be known exactly. In real field studies, this can be quite difficult to accomplish. Here we develop a Bayesian model for estimating abundance when sighting data are acquired from distinct sampling occasions without replacement, but the exact number of marked individuals is unknown. By first augmenting the data with some fixed number of individuals comprising a marked “super population,” the problem may then be reformulated in terms of estimating the proportion of this marked super population that was actually available for resighting. This then allows the data for the marked population available for resighting to be modeled as random realizations from a binomial logit-normal distribution. We demonstrate the use of our model to estimate the New Zealand robin (Petroica australis) population size in a region of Fiordland National Park, New Zealand. We then evaluate the performance of the proposed model relative to other estimators via a series of simulation experiments. We generally found our model to have advantages over other models when sample sizes are smaller with individually heterogeneous resighting probabilities. Due to limited budgets and the inherent variability between individuals, this is a common occurrence in mark-resight population studies. WinBUGS and R code to carry out these analyses is available from .     

Adsorption of the quinolone antibiotic nalidixic acid onto anion-exchange and neutral polymers

Pharmaceutical products are being found in surface and ground waters around the world. While the consequences to human health are unknown, it is suspected that these contaminants adversely alter aquatic ecosystems. This study presents adsorption results for one pharmaceutical product, nalidixic acid (NA), on neutral and anion-exchange polymers at three pH values. The adsorption of NA below and above its pKa of approximately 6 on polymers with different matrices, forms, and degrees of polarity were evaluated. By comparing the Freundlich constants KF and n, the results show that the neutral form of NA adsorbs to a greater extent on neutral polymers, and that the anionic form of NA adsorbs more to anion-exchange polymers. Also, results of the adsorption experiments suggest that aromatic ring interactions between NA and the surface of both neutral and anion-exchange polymers are important in the adsorption process. These results have important implications for the treatment of pharmaceutical-contaminated water, as many pharmaceutical contaminants are ionizable and have aromatic rings in their structure. This study illustrates the importance of pH and sorbate and sorbent structure in considering polymer sorption for treatment of pharmaceutical-contaminated aqueous systems.