Examination of model predictions at different horizontal grid resolutions

While fluctuations in meteorological and air quality variables occur on a continuum of spatial scales, the horizontal grid spacing of coupled meteorological and photochemical models sets a lower limit on the spatial scales that they can resolve. However, both computational costs and data requirements increase significantly with increasing grid resolution. Therefore, it is important to examine, for any given application, whether the expected benefit of increased grid resolution justifies the extra costs. In this study, we examine temperature and ozone observations and model predictions for three high ozone episodes that occurred over the northeastern United States during the summer of 1995. In the first set of simulations, the meteorological model RAMS4a was run with three two-way nested grids of 108/36/12 km grid spacing covering the United States and the photochemical model UAM-V was run with two grids of 36/12 km grid spacing covering the eastern United States. In the second set of simulations, RAMS4a was run with four two-way nested grids of 108/36/12/4 km grid spacing and UAM-V was run with three grids of 36/12/4 km grid spacing with the finest resolution covering the northeastern United States. Our analysis focuses on the comparison of model predictions for the finest grid domain of the simulations, namely, the region overlapping the 12 km and 4 km domains. A comparison of 12 km versus 4 km fields shows that the increased grid resolution leads to finer texture in the model predictions; however, comparisons of model predictions with observations do not reveal the expected improvement in the predictions. While high-resolution modeling has scientific merit and potential uses, the currently available monitoring networks, in conjunction with the scarceness of highly resolved spatial input data and the limitations of model formulation, do not allow confirmation of the expected superiority of the high-resolution model predictions.The U.S. Governments right to retain a non-exclusive royalty-free licence in and to any copyright is acknowledged.     

Speciation and carcinogenic classification—some limits of assessment and prevention procedures—the case of “nickel”

The speciation of nickel is of the highest importance for the definition of lists of substances for regulatory activity in terms of prevention, regarding possible cancer risk. A review is made of the different attitudes of outstanding administrations in front of nickel speciation. Some of them show a maximum of care in chemical definition, others reflect a lack of scientific rigor leading to generic classifications, more or less abusive. The great complexity of the chemistry and physicochemistry of nickel imposes the “two‐level speciation concept” (chemical and physicochemical), at least for compliance with the “Good Laboratory Practice” as far as experimental toxicology is concerned. Recommendations are exposed for the attention of toxicologists and regulators who have been for some years now extremely solicited for prevention aims.     

Liver and renal lesions in mercury-contaminated narwhals (Monodon monoceros) from North West Greenland

Narwhals (Monodon monoceros) from North West Greenland are known to bioaccumulate mercury (Hg) in tissues and internal organs. This is postulated to be a health concern and therefore studies were undertaken to conduct a screening study of Hg concentrations and histopathology of liver and renal tissues in a total of 12 specimens. The sample consisted of two sub-adults (one male, one female) and 10 adult (six males, four females) collected in Qaanaaq (Thule) 2010. In liver, Hg mean ± SD was 11.88 ± 10.47 μg/g ww (range: 0.39?31.8 μg/g ww) while the concentrations in kidneys were 1.85 ± 1.20 μg/g ww (range: 0.41?4.03 μg/g ww). There was no marked difference in Hg concentrations between males and females while sub-adults had significantly lower concentrations. The histological examinations of renal tissue showed glomerular capillary dilatation and basement membrane thickening, dilatation, and hyalinization of Bowman's space/capsule and tubular lesions with hyaline casts accompanied by interstitial fibrosis in the kidneys. In liver tissue, portal cell infiltrates and fibrosis, bile duct proliferation, lipid-filled Ito cells, and steatosis were found. There was no marked difference in histological prevalence between males and females and in Hg concentrations in individuals with or without lesions. Four of seven renal lesions and one liver lesion were found in the two sub-adult whales. Based upon these findings, as well as the nature of the lesions, evidence suggests that histopathological alterations were a result of age but that Hg might be an aggravating co-factor in development of renal lesions in particular.     

Sensitivity to assumptions in models of generalist predation on a cyclic prey

Ecological theory predicts that generalist predators should damp or suppress long-term periodic fluctuations (cycles) in their prey populations and depress their average densities. However, the magnitude of these impacts is likely to vary depending on the availability of alternative prey species and the nature of ecological mechanisms driving the prey cycles. These multispecies effects can be modeled explicitly if parameterized functions relating prey consumption to prey abundance, and realistic population dynamical models for the prey, are available. These requirements are met by the interaction between the Hen Harrier (Circus cyaneus) and three of its prey species in the United Kingdom, the Meadow Pipit (Anthus pratensis), the field vole (Microtus agrestis), and the Red Grouse (Lagopus lagopus scoticus). We used this system to investigate how the availability of alternative prey and the way in which prey dynamics are modeled might affect the behavior of simple trophic networks. We generated cycles in one of the prey species (Red Grouse) in three different ways: through (1) the interaction between grouse density and macroparasites, (2) the interaction between grouse density and male grouse aggressiveness, and (3) a generic, delayed density-dependent mechanism. Our results confirm that generalist predation can damp or suppress grouse cycles, but only when the densities of alternative prey are low. They also demonstrate that diametrically opposite indirect effects between pairs of prey species can occur together in simple systems. In this case, pipits and grouse are apparent competitors, whereas voles and grouse are apparent facilitators. Finally, we found that the quantitative impacts of the predator on prey density differed among the three models of prey dynamics, and these differences were robust to uncertainty in parameter estimation and environmental stochasticity.     

Insights on plant interaction between dominating species from patterns of plant association: expected covariance of pin-point cover measurements of two species

It has been suggested that in order to infer ecological processes from observed patterns of species abundance we need to investigate the covariance in species abundance. Consequently, an expression for the expected covariance of pin-point cover measurements of two species is developed. By comparing the observed covariance with the expected covariance we get a new type of information on the spatial arrangement of two species. Here the discrepancy between the observed and expected covariance may be thought of as a measure of the spatial configuration of the two species that may indicate underling ecological processes. The method is applied in a case study of Calluna vulgaris and Deschampsia flexuosa on dry heathland sites. The observed covariance of Calluna and Deschampsia at the level of the sites was positively and significantly correlated with the expected covariance. Negative covariance was observed on sites where both Calluna and Deschampsia had a high cover, which is in agreement with the notion that both species form distinct patches. Oppositely, at sites where both species have a low cover, we found that both the expected and observed covariance were positive. The proposed measure for the expected covariance of two species does capture information on the combined spatial configuration of the two species if the species are common. We show how this may be relevant for understanding the underlying ecological processes leading to the observed covariance.     

美国和五大湖双边共同关注区域的白肚燕(双色树燕)雏鸟的有机污染状况

白肚燕,又名双色树燕,栖居于五大湖流域中27个双边共同关注区域(AOCs),从2010年到2014年对其进行了污染物暴露风险评估,以协助管理者和监管者评估五大湖AOCs的污染状况。本文比较了AOCs和附近非AOCs雏鸟体内污染物浓度的差异。AOCs白肚燕雏鸟尸体中多氯联苯(PCB)和多溴联苯醚的含量分别为30%和33%,低于非AOCs的平均浓度。AOCs白肚燕雏鸟胃含物中多环芳烃(PAH)浓度和血浆中全氟化合物浓度分别为67%和64%,也低于非AOCs的平均浓度。但是与已有生殖效应记载的高PCB污染区相比,有些AOCs雏鸟尸体内的PCBs浓度只是存在小幅升高。一些AOCs食物中PAHs的浓度足够高以致引起可测量的生理响应。在AOCs中,全氟化合物全氟辛烷磺酸在血浆中的最高浓度出现在Raisin河(密歇根州,美国;几何平均数330 ng/mL),但远低于预估毒性的参考值(1 700 ng/mL)。之前有研究报道雏鸟胃含物中PAH和PCB的浓度以及尸体中PCBs的含量与沉积物中污染物的含量显著相关,从而可加强白肚燕在评估沉积物污染生物有效性方面的应用。
精选自Thomas W. Custer, Christine M. Custer, Paul M. Dummer, Diana Goldberg, J. Christian Franson, Richard A. Erickson. Organic contamination in tree swallow (Tachycineta bicolor) nestlings at United States and binational Great Lakes areas of concern. Environmental Toxicology and Chemistry: Volume 36, Issue 3, pages 735–748, July 2017. DOI: 10.1002/etc.3598
详情请见http://onlinelibrary.wiley.com/wol1/doi/10.1002/etc.3598/full
     

Fungal laccases: from structure-activity studies to environmental applications

Laccases are multicopper oxidases mainly secreted by filamentous fungi. Producing radical forms from organic substrates, they are involved in numerous reactions leading to the degradation and polymerization of xenobiotics. Our studies have led to a better knowledge of the structural, catalytic and genetic properties of laccases and allowed to develop a strategy for their evolution through genetic engineering. Here, we show that fungal laccases, wild or engineered, may be potent tools to develop bioremediation processes of soils polluted by organic compounds, and assays to assess the ecotoxicological impact of these pollutants on soil fungi.