Characterization of biological responses under different environmental conditions: A hierarchical modeling approach

A natural river system is organized as a nested hierarchy of interconnected habitats with specific environmental conditions to which the biological community has adapted. Due to this hierarchical structure, identifying the role of different stressors on the biological community is a formidable task. Efforts trying to link stressors to biological integrity have always been bound to the geographic scale of the selected study area, leading to scale-specific results. In this research, an attempt is made to lift this limitation and develop a hierarchical, scale-sensitive methodology that can identify the significant environmental stressors to the biological community at different scales. Sites with similar background environmental conditions are clustered using self-organizing maps (SOM). This is used to identify stressors which affect the biological community throughout the area of study - called environmental gradients or large-scale stressors. Subsequently, these clusters of similar observations (sampling sites) are progressively sub-divided using environmental variables with a significant but localized effect on the biological community - called small-scale stressors. A parent group of sites is split only when the resulting sub-groups have significantly different biological responses. At the end of this recursive sites decomposition procedure, the original set of observations is organized as a tree of environmentally homogeneous groups of observations characterized by unique biological responses to multiple stressors with different geographic extents. The developed hierarchical analysis methodology has been validated using a large-size dataset of environmental observations from the State of Ohio. Our results show that habitat degradation and increased nutrient loading are the large-scale stressors with a widespread impact in Ohio. Other stressors, such as heavy metals, pH or nitrate concentrations have significant albeit localized effects on biological integrity.     

Modelling landscape effects on density-contact rate relationships of deer in eastern Alberta: Implications for chronic wasting disease

Managing wildlife diseases requires an understanding of disease transmission, which may be strongly affected by host population density and landscape features. Transmission models are typically fit from time-series disease prevalence data and modelled based on how the contact rate among hosts is affected by density, which is often assumed to be a linear (density-dependent transmission) or constant (frequency-dependent transmission) relationship. However, long-term time-series data is unavailable for emerging diseases, and this approach cannot account for independent effects of landscape. We developed a mechanistic model based on ecological data to empirically derive the contact rate-density relationship in white-tailed and mule deer in an enzootic region of chronic wasting disease (CWD) in Alberta, Canada and to determine whether it was affected by landscape. Using data collected from aerial surveys and GPS-telemetry, we developed empirical relationships predicting deer group size, home range size, and habitat selection to iteratively simulate deer distributions across a range of densities and landscapes. We calculated a relative measure of total per-capita contact rate, which is proportional to the number of other deer contacted per individual per unit time, for each distribution as the sum of pairwise contact rates between a target deer and all other individuals. Each pairwise contact rate was estimated from an empirical relationship developed from GPS-telemetry data predicting pairwise contact rates as a function of home range overlap and landscape structure. Total per-capita contact rates increased as a saturating function of density, supporting a transmission model intermediate between density- and frequency-dependent transmission. This pattern resulted from group sizes that reached an asymptote with increasing deer density, although this relationship was mediated by tree and shrub coverage in the landscape, such that in heavily wooded areas, the contact rate saturated at much lower densities. These results suggest that CWD management based on herd reductions, which require a density-dependent contact rate to be effective, may have variable effects on disease across a single management region. The novel mechanistic approach we employed for estimating effects of density and landscape on transmission is a powerful complement to typical data-fitting approaches for modelling disease transmission.     

Scale-dependent response diversity of seabirds to prey in the North Sea

Functional response diversity is defined as the diversity of responses to environmental change among species that contribute to the same ecosystem function. Because different ecological processes dominate on different spatial and temporal scales, response diversity is likely to be scale dependent. Using three extensive data sets on seabirds, pelagic fish, and zooplankton, we investigate the strength and diversity in the response of seabirds to prey in the North Sea over three scales of ecological organization. Two-stage analyses were used to partition the variance in the abundance of predators and prey among the different scales of investigation: variation from year to year, variation among habitats, and variation on the local patch scale. On the year-to-year scale, we found a strong and synchronous response of seabirds to the abundance of prey, resulting in low response diversity. Conversely, as different seabird species were found in habitats dominated by different prey species, we found a high diversity in the response of seabirds to prey on the habitat scale. Finally, on the local patch scale, seabirds were organized in multispecies patches. These patches were weakly associated with patches of prey, resulting in a weak response strength and a low response diversity. We suggest that ecological similarities among seabird species resulted in low response diversity on the year-to-year scale. On the habitat scale, we suggest that high response diversity was due to interspecific competition and niche segregation among seabird species. On the local patch scale, we suggest that facilitation with respect to the detection and accessibility of prey patches resulted in overlapping distribution of seabirds but weak associations with prey. The observed scale dependencies in response strength and diversity have implications for how the seabird community will respond to different environmental disturbances.     

The political ecology of Yukon forestry: managing the forest as if people mattered

Over the past several decades a growing interest has emerged in the relationship between forest dependent communities and their use of non-timber forest resources (NTFR—i.e. berries, roots, barks). Motivated in large part by international concerns over the loss of biological and cultural diversity, efforts are now being made to conserve the world's remaining forests by repositioning NTFR to the forefront of the forest management process. Together with the Little Salmon Carmacks First Nation, we have undertaken an assessment that: 1) addresses the role of NTFR in fulfilling basic human necessities and well-being of community members, and 2) identifies the perceptual differences that exist among First Nation and non-First Nation community members regarding the security and future availability of forest resources. Based on our findings, we argue that if the true value of the forest is to be understood, and thus sustained, those involved in management must consider the full array of products and services the forest provides. Thus the conventional and over-simplified view that the forest is to provide primarily for commercial timber must be challenged in light of the multiplicity of values community members gain from forest use.     

Trace Metals in Fish and Crustaceans - Identifying Heavier Polluted Areas in the Ghanaian Continental Shelf

Abstract

The concentrations of four trace metals, namely copper, lead, cadmium and manganese, were determined in six fish species and three crustaceans collected from five sites spanning over 70% of the Ghanaian coastline.

Copper and lead were determined in Barracuda (Spraena spraena), the Ribbon fish (Trichiurus lepturus), the Sardine (Sardinella spp), the Sole (Cynoflossus senegalensis), the Sea Bream (Pagrus coupei) and the Soldier fish (Cynapastas marmuratus). Cadmium and manganese were analyzed in the Blue Crab (Callinectes sepidus), the Spiny lobster (Panilirus regius) and the edible shrimp (Crago septempinosus). Sampling sites included Takoradi, Elmina, Cape Coast, Accra and Tema.

Lead and copper in the fishes ranged 0.25-0.94 μgg^?1 fresh weight and 0.40-2.54 μgg^?1 dry weight (FW) respectively whilst cadmium and manganese in the crustaceans ranged 0.05-0.083 μgg^?1 FW and 0.554-1.404 μgg^?1 FW respectively.

The Barracuda accumulated the greatest amount of metals whilst the sardine accumulated the least. with the crustaceans, there was a significant difference between the amounts of the metals accumulated. the blue crab accumulated the greatest and the edible shrimp the least.

The analysis showed that: (i) there was a positive correlation between the metals bioconcentrated and the extent of pollution of the marine waters and (ii) along the Ghanaian Continental Shelf, the extent of pollution was of the increasing order as: Elmina = Cape Coast < Takoradi < Accra < Tema. Pollution of the marine waters could be minimized by control of flow of pollutants from land based activities.     

Pollutant decontamination by polyethyleneimine-engineered agricultural waste materials: a review

Environmental Chemistry Letters - The direct discharge of untreated contaminants into global water systems has jeopardized our water security worldwide. This environmental concern has prompted...     

Effects of anthropogenic landscapes on population maintenance of waterbirds

Anthropogenic impacts have reduced natural areas but increased the area of anthropogenic landscapes. There is debate about whether anthropogenic landscapes (e.g., farmlands, orchards, and fish ponds) provide alternatives to natural habitat and under what circumstances. We considered whether anthropogenic landscapes can mitigate population declines for waterbirds. We collected data on population trends and biological traits of 1203 populations of 579 species across the planet. Using Bayesian generalized linear mixed models, we tested whether the ability of a species to use an anthropogenic landscape can predict population trends of waterbird globally and of species of conservation concern. Anthropogenic landscapes benefited population maintenance of common but not less-common species. Conversely, the use of anthropogenic landscapes was associated with population declines for threatened species. Our findings delineate some limitations to the ability of anthropogenic landscapes to mitigate population declines, suggesting that the maintenance of global waterbird populations depends on protecting remaining natural areas and improving the habitat quality in anthropogenic landscapes. Article impact statement: Protecting natural areas and improving the quality of anthropogenic landscapes as habitat are both needed to achieve effective conservation.     

Translating the 10 golden rules of reforestation for coral reef restoration

Efforts are accelerating to protect and restore ecosystems globally. With trillions of dollars in ecosystem services at stake, no clear framework exists for developing or prioritizing approaches to restore coral reefs even as efforts and investment opportunities to do so grow worldwide. Restoration may buy time for climate change mitigation, but it lacks rigorous guidance to meet objectives of scalability and effectiveness. Lessons from restoration of terrestrial ecosystems can and should be rapidly adopted for coral reef restoration. We propose how the 10 golden rules of effective forest restoration can be translated to accelerate efforts to restore coral reefs based on established principles of resilience, management, and local stewardship. We summarize steps to undertake reef restoration as a management strategy in the context of the diverse ecosystem service values that coral reefs provide. Outlining a clear blueprint is timely as more stakeholders seek to undertake restoration as the UN Decade on Ecosystem Restoration begins.