Accuracy and reliability of dogs in surveying for desert tortoise (Gopherus agassizii).

The desert tortoise (Gopherus agassizii) is federally listed as "threatened" and is afforded protection in several U.S. states including California, Nevada, Utah, and Arizona. Numerous factors ranging from habitat destruction to disease are thought to contribute to the species' decline throughout its range. Data collection on desert tortoises in the wild is challenging because tortoises are secretive, and many age and size classes are virtually undetectable in the wild. Detection dogs have been used for decades to assist humans, and the use of dogs for wildlife surveys is of increasing interest to scientists and wildlife managers. To address the basic question of whether dogs could be used to survey for the desert tortoise, we quantified the reliability and efficacy of dogs trained for this purpose. Efficacy is the number of tortoises that dogs find out of a known population. Reliability is a measure of how many times a dog performs its trained alert when it has found a tortoise. A series of experimental trials were designed to statistically quantify these metrics in the field setting where dogs trained to locate live desert tortoises were tested on their ability to find them on the surface, in burrows, and in mark-recapture surveys. Results indicated that dogs are effective at and can safely locate desert tortoises with reliability on the surface and are capable of detecting tortoises in burrows under a range of environmental conditions. Dogs found tortoises at the same statistical rate at temperatures between 12 degrees and 27 degrees C, relative humidity from 16% to 87%, and wind speeds up to 8 m/s. In both surface and burrow trials, dogs found >90% of the experimental animals. In comparative studies with humans, dogs found tortoises as small as 30 mm, whereas the smallest tortoise located by human survey teams was 110 mm. Although not all dogs or dog teams meet the requirements to conduct wildlife surveys, results from this study show the promise in using dogs to increase our knowledge of rare, threatened, and endangered species through improved data collection methods.     

Global pilot study for persistent organic pollutants (POPs) using PUF disk passive air samplers

Polyurethane foam (PUF) disks were deployed at global background sites, to test logistical issues associated with a global monitoring network for persistent organic pollutants (POPs). alpha-HCH, exhibited relatively high and uniform concentrations (17-150 pg/m3) at temperate and arctic sites with elevated concentrations associated with trans-Pacific inflow. Concentrations were much lower (<5 pg/m3) in Bermuda, Chile and Cape Grim. Concentrations for gamma-HCH, the main component of lindane, were spatially similar to the alpha-HCH pattern but lower in magnitude (typically, <10 pg/m3). Chlordane concentrations (sum of cis-chlordane, trans-chlordane and trans-nonachlor) were also low (<10 pg/m3). Dieldrin concentrations were in the range 2-25 pg/m3 at most sites but elevated in Bermuda. Back trajectories suggest that advection from Africa and the US may contribute. Endosulfan, a popular current-use pesticide, exhibited highest concentrations ranging from tens to hundreds of pg/m3. There was good agreement between duplicate samplers at each site and PUF disk-derived air concentrations agreed with high volume data. Few logistical/analytical problems were encountered in this pilot study.     

Using environmental and geographic data to optimize ex situ collections and preserve evolutionary potential

Maintenance of biodiversity through seed banks and botanical gardens, where the wealth of species’ genetic variation may be preserved ex situ, is a major goal of conservation. However, challenges can persist in optimizing ex situ collections if trade-offs exist among cost, effort, and conserving species evolutionary potential, particularly when genetic data are not available. We evaluated the genetic consequences of population preservation informed by geographic (isolation by distance [IBD]) and environmental (isolation by environment [IBE]) distance for ex situ collections for which population provenance is available. We used 19 genetic and genomic data sets from 15 plant species to assess the proportion of population genetic differentiation explained by geographic and environmental factors and to simulate ex situ collections prioritizing source populations based on pairwise geographic distance, environmental distance, or both. Specifically, we tested the impact prioritizing sampling based on these distances may have on the capture of neutral, functional, or putatively adaptive genetic diversity and differentiation. Individually, IBD and IBE explained limited population genetic differences across all 3 genetic marker classes (IBD, 10–16%; IBE, 1–5.5%). Together, they explained a substantial proportion of population genetic differences for functional (45%) and adaptive (71%) variation. Simulated ex situ collections revealed that inclusion of IBD, IBE, or both increased allelic diversity and genetic differentiation captured among populations, particularly for loci that may be important for adaptation. Thus, prioritizing population collections based on environmental and geographic distance data can optimize genetic variation captured ex situ. For the vast majority of plant species for which there is no genetic information, these data are invaluable to conservation because they can guide preservation of genetic variation needed to maintain evolutionary potential within collections.     

Comparison of light- and SST-based geolocation with satellite telemetry in free-ranging albatrosses

Light-based archival tags are increasingly being used on free-ranging marine vertebrates to study their movements using geolocation estimates. These methods use algorithms that incorporate threshold light techniques to determine longitude and latitude. More recently, researchers have begun using sea surface temperature (SST) to determine latitude in temperate regions. The accuracy and application of these algorithms have not been validated on free-ranging birds. Errors in both geolocation methods were quantified by double-tagging Laysan (Phoebastria immutabilis Rothschild) and black-footed (P. nigripes Audubon) albatrosses with both leg-mounted archival tags that measured SST and ambient light, and satellite transmitters. Laysan albatrosses were captured and released from breeding colonies on Tern Island, northwestern Hawaiian Islands (23°52N, 166°17W) and Guadalupe Island, Mexico (28°31N, 118°10W) and black-footed albatrosses from Tern Island. Studies were carried out between December 2002 and March 2003. For all birds combined, the mean ± SD great circle (GC) distance between light-based locations and satellite-derived locations was 400±298 km (n=131). Errors in geolocation positions were reduced to 202±171 km (n=154) when light-based longitude and SST-based latitude (i.e. SST/light) were used to establish locations. The SST/light method produced comparable results for two Laysan albatross populations that traveled within distinctly different oceanic regions (open ocean vs more coastal) whereas light-based methods produced greater errors in the coastal population. Archival tags deployed on black-footed albatrosses returned a significantly higher proportion of lower-quality locations, which was attributed to interference of the light sensor on the tag. Overall, the results demonstrate that combining measures of light-based longitude and SST-based latitude significantly reduces the error in location estimates for albatrosses and can provide valid latitude estimates during the equinoxes, when light-based latitude measurements are indeterminate.Communicated by J.P. Grassle, New Brunswick     

Binding of manganese by Antarctic Phaeocystis pouchetii and the role of bacteria in its release

The growth of Antarctic Phaeocystis pouchetii and associated bacteria in culture, and the binding and release of manganese were investigated using cultures derived from three clonal isolates collected from Prydz Bay, Antarctica, in November and December 1982. The cultured strains accumulated manganese from the culture medium. The concentration of Mn²⁺ in the alga was up to 58 times that of the medium. The Mn²⁺ apparently binds to the mucilage secreted by the cells and gives the alga its characteristic brown colour. Oxidation or complexing of Mn²⁺ by P. pouchetii was also indicated. Bacterial growth on the mucilage is inhibited in rapidly growing cultures by acrylic acid produced in the mucilage. Once the growth of P. pouchetii and production of ccrylic acid slow, bacterial numbers increase, leading to the solubilization of the mucilage and the release of Mn²⁺. In cool-temperate, subpolar and polar seas where P. pouchetii may form dense blooms, the binding and subsequent release of manganese may have important consequences for competing phytoplankton.     

Application of a coupled ecosystem-chemical equilibrium model, DayCent-Chem, to stream and soil chemistry in a Rocky Mountain watershed

Atmospheric deposition of sulfur and nitrogen species have the potential to acidify terrestrial and aquatic ecosystems, but nitrate and ammonium are also critical nutrients for plant and microbial productivity. Both the ecological response and the hydrochemical response to atmospheric deposition are of interest to regulatory and land management agencies. We developed a non-spatial biogeochemical model to simulate soil and surface water chemistry by linking the daily version of the CENTURY ecosystem model (DayCent) with a low temperature aqueous geochemical model, PHREEQC. The coupled model, DayCent-Chem, simulates the daily dynamics of plant production, soil organic matter, cation exchange, mineral weathering, elution, stream discharge, and solute concentrations in soil water and stream flow. By aerially weighting the contributions of separate bedrock/talus and tundra simulations, the model was able to replicate the measured seasonal and annual stream chemistry for most solutes for Andrews Creek in Loch Vale watershed, Rocky Mountain National Park. Simulated soil chemistry, net primary production, live biomass, and soil organic matter for forest and tundra matched well with measurements. This model is appropriate for accurately describing ecosystem and surface water chemical response to atmospheric deposition and climate change.     

Learning organisations for major hazards and the role of the regulator

A learning organisation is one that not only values and encourages learning from its own experiences, but also looks beyond itself for lessons, and avoids complacency. To be a learning organisation is a key part of the safety culture of any organisation involved with major hazard processes. It facilitates learning which can reduce the risk from major accident hazards. The paper provides a learning organisation toolkit which synthesises, from various literature sources, an understanding of what a learning organisation is and how to begin to develop one within an organisation. The paper illustrates how the regulator can be a learning organisation for major hazards, using the example of HSE's offshore fire, explosion and risk assessment team.     

Habitat,movements and environmental preferences of dusky sharks,Carcharhinus obscurus,in the northern Gulf of Mexico

The dusky shark (Carcharhinus obscurus) is the largest member of the genus Carcharhinus and inhabits coastal and pelagic ecosystems circumglobally in temperate, subtropical and tropical marine waters. In the western North Atlantic Ocean (WNA), dusky sharks are overfished and considered vulnerable by the International Union for the Conservation of Nature. As a result, retention of dusky sharks in commercial and recreational fisheries off the east coast of the United States (US) and in the northern Gulf of Mexico is prohibited. Despite the concerns regarding the status of dusky sharks in the WNA, little is known about their habitat utilization. During the summers of 2008–2009, pop-up satellite archival tags were attached to ten dusky sharks (one male, nine females) at a location where they have been observed to aggregate in the north central Gulf of Mexico southwest of the Mississippi River Delta to examine their movement patterns and habitat utilization. All tags successfully transmitted data with deployment durations ranging from 6 to 124 days. Tag data revealed shark movements in excess of 200 km from initial tagging locations, with sharks primarily utilizing offshore waters associated with the continental shelf edge from Desoto Canyon to the Texas/Mexican border. While most sharks remained in US waters, one individual moved from the northern Gulf of Mexico into the Bay of Campeche off the coast of Mexico. Sharks spent 87 % of their time between 20 and 125 m and 83 % of their time in waters between 23 and 30 °C. Since dusky sharks are among the most vulnerable shark species to fishing mortality, there is a recovery plan in place for US waters; however, since they have been shown to make long-distance migrations, a multi-national management plan within the WNA may be needed to ensure the successful recovery of this population.     

Changes in nutrient content and stable isotope ratios of C and N during decomposition of seagrasses and mangrove leaves along a nutrient availability gradient in Florida Bay,USA

The decomposition of the mangrove Rhizophora mangle and the seagrass Thalassia testudinum was examined using litterbags along a natural gradient in nutrient availability. Seagrass leaves had a higher fraction of their biomass in the labile pool (57%), compared to mangrove leaves (36%) and seagrass rhizomes (29%); the overall decomposition rates of the starting material reflected the fractionation into labile and refractory components. There was no relationship between the N or P content of the starting material and the decomposition rate.

Nutrient availability had no influence on decomposition rate, and mass was lost at the same rate from litterbags that were buried in the sediment and litterbags that were left on the sediment surface. The dynamics of N and P content during decomposition varied as a function of starting material and burial state. N content of decomposing mangrove leaves increased, but seagrass rhizomes decreased in N content during decomposition while there was no change in seagrass leaf N content. These same general patterns held for P content, but buried seagrass leaves increased in P content while surficial leaves decreased. δ¹³C and δ¹⁵N changed by as much as 2‰ during decomposition.