Climate change and crop diversity: farmers’ perceptions and adaptation on the Bolivian Altiplano

Crop diversity is central to traditional risk management practices on the Andean Altiplano and may find renewed importance in adapting to climate change. This study explored the role of crop diversity in farmers’ adaptation actions in eight Aymara communities on the northern Bolivian Altiplano. Using a combination of quantitative and qualitative methods, including multifactor analysis and a community resilience self-assessment, we investigated how farmers’ use of diversity in adaptation is related to their perceptions of crop and variety tolerances and other environmental, social, and economic factors. Few crops and varieties were perceived as tolerant to increasingly intense and unpredictable drought, frost, hail, and pest and disease outbreaks. Some local crops and varieties were perceived as vulnerable to emerging conditions (e.g. oca, papalisa, isaño), whereas bitter potatoes and wild relatives of quinoa and cañahua were perceived as highly stress tolerant and provide food in harsh periods. A total 19% of households surveyed (N = 193) had introduced new crops or varieties—often disease resistant or early maturing—as an adaptive action. Introduction of commercial crops was a common adaptation action, reflecting farmers’ response to warming temperatures and changing economic opportunities, but greater sensitivity of the introduced crops may cause maladaptation. Despite intensification of cropping systems, households continue to maintain a median four potato varieties with different tolerance traits, yet this risk management practice was not perceived as adaptation. Strengthening resilience will require a combination of actions, including maintaining and expanding crop portfolios and restoring soil and ecosystem health, using both traditional and innovative approaches.     

Are Nitrogen-Fertilized Forest Soils Sinks or Sources of Carbon?

We developed a simple conceptual model that tracks nitrogen and carbon jointly through an N fertilized forest ecosystem. The stimulation of growth increases the litterfall and imports substrate for soil microorganisms. Microbial biomass forms according to the supply of C and N. The formation of microbial biomass is accompanied by respiratory C losses. The quantity of CO₂ efflux depends on the C use efficiency of microbes. When excess N is available, the microbial activity is accelerated and the demand for substrate is high. Litterfall supplies an insufficient amount of C to the soil. In such a case, labile soil C is mineralized and the net effect of N fertilization is a loss of soil C. A strong N fertilization effect on the aboveground biomass can offset the soil C loss. In the case of a low N dosage or high N losses due to leaching or emission of nitrogen oxides, the soil C loss is small. The conceptual model was applied to a case study. The field data, collected over a time span of several decades, could not support sound conclusions on the temporal trend of soil C because the spatial and temporal variability of the chemical data was high. The conceptual model allowed to give an evaluation of the fertilization effect on soil C based on reproducible principles.     

Contributions of Acid Deposition and Natural Processes to Cation Leaching from Forest Soils: A Review

Methods of quantifying the roles of atmospheric acid inputs and internal acid generation by carbonic, organic, and nitric acids are illustrated by reviewing data sets from several intensively studied sites in North America. Some of the sites (tropical, temperate deciduous, and temperate coniferous) received acid precipitation whereas others (northern and subalpine) did not. Natural leaching by carbonic acid dominated soil leaching in the tropical and temperate coniferous sites, nitric acid (caused by nitrification) dominated leaching In an N-fixing temperate deciduous site, and organic acids dominated surface soil leaching in the subalpine site and contributed to leaching of surface soils in several other sites. Only at the temperate deciduous sites did atmospheric acid input play a major role in soil leaching. In no case, however, are the annual net losses of cations regarded as alarming as compared to soil exchangeable cation capital.

These results were used to illustrate the methods of quantifying the effects of atmospheric inputs and internal processes on soil leaching rates, not to draw broad generalizations as to acid rain effects on soils. However, there are predictable patterns in natural soil leaching processes which relate to climate, soil properties, and vegetation that may help in predicting the relative importances of natural vs. atmospheric acid inputs to soil leaching.     

Bioremediation of benzene-, MTBE- and ammonia-contaminated groundwater with pilot-scale constructed wetlands

In this pilot-scale constructed wetland (CW) study for treating groundwater contaminated with benzene, MTBE, and ammonia-N, the performance of two types of CWs (a wetland with gravel matrix and a plant root mat) was investigated. Hypothesized stimulative effects of filter material additives (charcoal, iron(III)) on pollutant removal were also tested. Increased contaminant loss was found during summer; the best treatment performance was achieved by the plant root mat. Concentration decrease in the planted gravel filter/plant root mat, respectively, amounted to 81/99% for benzene, 17/82% for MTBE, and 54/41% for ammonia-N at calculated inflow loads of 525/603 mg/m²/d, 97/112 mg/m²/d, and 1167/1342 mg/m²/d for benzene, MTBE, and ammonia-N. Filter additives did not improve contaminant depletion, although sorption processes were observed and elevated iron(II) formation indicated iron reduction. Bacterial and stable isotope analysis provided evidence for microbial benzene degradation in the CW, emphasizing the promising potential of this treatment technique.     

Non-destructive pollution exposure assessment in the European hedgehog (Erinaceus europaeus): IV. Hair versus soil analysis in exposure and risk assessment of organochlorine compounds

Few ecotoxicological studies on mammals use non-destructive methodologies, despite the growing ethical concern over the use of destructive sampling methods. In the present study we assessed exposure of hedgehogs (Erinaceus europaeus) to polychlorinated biphenyls (PCBs), dichloro-diphenyl-trichloroethanes (DDTs), hexachlorocyclohexanes (HCHs) and hexachlorobenzene (HCB), by investigating concentrations of these compounds in soils and hedgehog hair from seven study sites around the urban area of Antwerp, Belgium. No relationships were observed between organochlorine compound concentrations in soils and hair from the different study areas. Furthermore, the individual variation of contamination levels in hair within study sites was high, especially for HCHs and HCB, and hair and soil had different relative profiles for PCBs, DDTs and HCHs. Our results show that concentrations of organochlorine compounds in soils alone are not predictive of the risk of these pollutants to hedgehogs and that tissue analyses are preferred to soil analyses in exposure and risk assessment studies.     

Prenatal diagnosis,fetal pathology and cytogenetic analysis of A 46,XX/47,XX, + 15 mosaic

Mosaic trisomy 15 was prenatally diagnosed on amniotic fluid cells from two consecutive amniocenteses and was confirmed on cells from five different fetal tissues. The proportion of normal versus trisomic cells was consistently higher in the amniotic cell cultures and-with one exception-in the fetal tissues, while serial subcultures gave different results. The slightly atypical external features and internal malformations of the affected fetus as compared to the only clinical observation from the literature are not unusual enough to allow the delineation of a specific malformation pattern.     

A prospective study on rapid exome sequencing as a diagnostic test for multiple congenital anomalies on fetal ultrasound

Objective

Conventional genetic tests (quantitative fluorescent-PCR [QF-PCR] and single nucleotide polymorphism-array) only diagnose ~40% of fetuses showing ultrasound abnormalities. Rapid exome sequencing (rES) may improve this diagnostic yield, but includes challenges such as uncertainties in fetal phenotyping, variant interpretation, incidental unsolicited findings, and rapid turnaround times. In this study, we implemented rES in prenatal care to increase diagnostic yield.

Methods

We prospectively studied 55 fetuses. Inclusion criteria were: (a) two or more independent major fetal anomalies, (b) hydrops fetalis or bilateral renal cysts alone, or (c) one major fetal anomaly and a first-degree relative with the same anomaly. In addition to conventional genetic tests, we performed trio rES analysis using a custom virtual gene panel of ~3850 Online Mendelian Inheritance in Man (OMIM) genes.

Results

We established a genetic rES-based diagnosis in 8 out of 23 fetuses (35%) without QF-PCR or array abnormalities. Diagnoses included MIRAGE (SAMD9), Zellweger (PEX1), Walker-Warburg (POMGNT1), Noonan (PTNP11), Kabuki (KMT2D), and CHARGE (CHD7) syndrome and two cases of Osteogenesis Imperfecta type 2 (COL1A1). In six cases, rES diagnosis aided perinatal management. The median turnaround time was 14 (range 8-20) days.

Conclusion

Implementing rES as a routine test in the prenatal setting is challenging but technically feasible, with a promising diagnostic yield and significant clinical relevance.