The relative influence of nutrients and habitat on stream metabolism in agricultural streams

Stream metabolism was measured in 33 streams across a gradient of nutrient concentrations in four agricultural areas of the USA to determine the relative influence of nutrient concentrations and habitat on primary production (GPP) and respiration (CR-24). In conjunction with the stream metabolism estimates, water quality and algal biomass samples were collected, as was an assessment of habitat in the sampling reach. When data for all study areas were combined, there were no statistically significant relations between gross primary production or community respiration and any of the independent variables. However, significant regression models were developed for three study areas for GPP (r ² = 0.79–0.91) and CR-24 (r ² = 0.76–0.77). Various forms of nutrients (total phosphorus and area-weighted total nitrogen loading) were significant for predicting GPP in two study areas, with habitat variables important in seven significant models. Important physical variables included light availability, precipitation, basin area, and in-stream habitat cover. Both benthic and seston chlorophyll were not found to be important explanatory variables in any of the models; however, benthic ash-free dry weight was important in two models for GPP.     

Elevated temperature and light enhance progression and spread of black band disease on staghorn corals of the Great Barrier Reef

Rates of progression and transmission of black band disease (BBD) on the staghorn coral, Acropora muricata, were compared between months for seasonal in situ studies and between temperature treatments in experimental aquaria manipulations at Lizard Island on the Great Barrier Reef (GBR). In situ field experiments demonstrated that BBD progressed along branches approximately twice as fast (1.7–2.4 times) during the austral summer month of January (0.99 ± 0.04 cm/day) than in the cooler months of July (0.58 ± 0.04 cm/day) and May (0.41 ± 0.07 cm/day). Transmission of BBD between colonies was also accelerated in warmer months, with signs of infection becoming visible 1.2 days earlier in January compared to May. The greater seawater temperatures by ∼2 to 3°C and light intensities by up to 650 μE/m²/s in January, suggest that rates of progression and transmission of BBD are linked to one or both of these parameters. Manipulative experiments in summer provide corroborative evidence that elevated temperatures increase rates of BBD progression, with the disease progressing 1.3 times more rapidly in the 32°C elevated temperature treatment than in the 30°C ambient treatment (1.17 ± 0.06 cm/day versus 0.92 ± 0.07 cm/day; F _2,6 = 7.66, P = 0.022). In contrast, although a trend for greatest BBD progression was measured in elevated temperature treatments of 29°C (0.46 ± 0.07 cm/day) and 31°C (0.52 ± 0.06 cm/day) in winter, these rates did not differ significantly (F _3,7 = 1.72, P = 0.249) from those measured for the ambient 27°C treatment (0.37 ± 0.06 cm/day) or the field controls (0.41 ± 0.09 cm/day). The lower rates of BBD progression in the 31°C winter treatment (0.52 ± 0.06 cm/day) than in the 30°C (0.92 ± 0.07 cm/day) summer treatment, may have been a response to 28-fold decreased light irradiance in the former, suggesting that high irradiance in combination with elevated temperatures may promote progression of BBD. Results from this study indicate that the impact of elevated temperature on BBD progression is complex with a combination of environmental factors including temperature and light playing key roles in progression and transmission of the disease.     

Toward Reversal of Eutrophic Conditions in a Subtropical Estuary: Water Quality and Seagrass Response to Nitrogen Loading Reductions in Tampa Bay, Florida, USA

Coastal waters have been significantly influenced by increased inputs of nutrients that have accompanied population growth in adjacent drainage basins. In Tampa Bay, Florida, USA, the population has quadrupled since 1950. By the late 1970s, eutrophic conditions including phytoplankton and macroalgal blooms and seagrass losses were evident. The focus of improving Tampa Bay is centered on obtaining sufficient water quality necessary for restoring seagrass habitat, estimated to have been 16,400 ha in 1950 but reduced to 8800 ha by 1982. To address these problems, targets for nutrient load reductions along with seagrass restoration goals were developed and actions were implemented to reach adopted targets. Empirical regression models were developed to determine relationships between chlorophyll a concentrations and light attenuation adequate for sustainable seagrass growth. Additional empirical relationships between nitrogen loading and chlorophyll a concentrations were developed to determine how Tampa Bay responds to changes in loads. Data show that when nitrogen load reduction and chlorophyll a targets are met, seagrass cover increases. After nitrogen load reductions and maintenance of chlorophyll a at target levels, seagrass acreage has increased 25% since 1982, although more than 5000 ha of seagrass still require recovery. The cooperation of scientists, managers, and decision makers participating in the Tampa Bay Estuary Program’s Nitrogen Management Strategy allows the Tampa Bay estuary to continue to show progress towards reversing many of the problems that once plagued its waters. These results also highlight the importance of a multi-entity watershed management process in maintaining progress towards science-based natural resource goals.     

The need to improve information on road user type in National Vital Statistics System mortality data

Objectives: Both the National Vital Statistics System (NVSS) and the Fatality Analysis Reporting System (FARS) can be used to examine motor vehicle crash (MVC) deaths. These 2 data systems operate independently, using different methods to collect and code information about the type of vehicle (e.g., car, truck, bus) and road user (e.g., occupant, motorcyclist, pedestrian) involved in an MVC. A substantial proportion of MVC deaths in NVSS are coded as “unspecified” road user, which reduces the utility of the NVSS data for describing burden and identifying prevention measures. This study aimed to describe characteristics of unspecified road user deaths in NVSS to further our understanding of how these groups may be similar to occupant road user deaths.

Methods: Using data from 1999 to 2015, we compared NVSS and FARS MVC death counts by road user type, overall and by age group, gender, and year. In addition, we examined factors associated with the categorization of an MVC death as unspecified road user such as state of residence of decedent, type of medical death investigation system, and place of death.

Results: The number of MVC occupant deaths in NVSS was smaller than that in FARS in each year and the number of unspecified road user deaths in NVSS was greater than that in FARS. The sum of the number of occupant and unspecified road user deaths in NVSS, however, was approximately equal to the number of FARS occupant deaths. Age group and gender distributions were roughly equivalent for NVSS and FARS occupants and NVSS unspecified road users. Within NVSS, the number of MVC deaths listed as unspecified road user varied across states and over time. Other categories of road users (motorcyclists, pedal cyclists, and pedestrians) were consistent when comparing NVSS and FARS.

Conclusions: Our findings suggest that the unspecified road user MVC deaths in NVSS look similar to those of MVC occupants according to selected characteristics. Additional study is needed to identify documentation and reporting challenges in individual states and over time and to identify opportunities for improvement in the coding of road user type in NVSS.     

Phylogenetic diversity of NO reductases,new tools for nor monitoring,and insights into N2O production in natural and engineered environments

● 548 representative nor genes were collected to create complete phylogenetic trees. ● The distribution of nor and nod genes were detected in 18 different phyla. ● The most conserved amino acids in NOR were located adjacent to the active site. ● nor-universal and Clade-specific primers were designed, suggested, and tested. Nitric oxide reductases (NORs) have a central role in denitrification, detoxification of nitric oxide (NO) in host-pathogen interactions, and NO-mediated cell-cell signaling. In this study, we focus on the phylogeny and detection of qNOR and cNOR genes because of their nucleotide sequence similarity and evolutionary relatedness to cytochrome oxidases, their key role in denitrification, and their abundance in natural, agricultural, and wastewater ecosystems. We also include nitric oxide dismutase (NOD) due to its similarity to qNOR. Using 548 nor sequences from publicly accessible databases and sequenced isolates from N₂O-producing bioreactors, we constructed phylogenetic trees for 289 qnor/nod genes and 259 cnorB genes. These trees contain evidence of horizontal gene transfer and gene duplication, with 13.4% of the sequenced strains containing two or more nor genes. By aligning amino acid sequences for qnor + cnor, qnor, and cnor, we identified four highly conserved regions for NOR and NOD, including two highly conserved histidine residues at the active site for qNOR and cNOR. Extending this approach, we identified conserved sequences for: 1) all nor (nor-universal); 2) all qnor (qnor-universal) and all cnor (cnor-universal); 3) qnor of Comamonadaceae; 4) Clade-specific sequences; and 5) nod of Candidatus Methylomirabilis oxyfera. Examples of primer performance were confirmed experimentally.     

USING CLIMATE FORECASTS FOR WATER MANAGEMENT: ARIZONA AND THE 1997–1998 EL NIÑO1

ABSTRACT: Unrelenting pressure on limited surface water supplies requires increasingly sophisticated water management approaches. Climate forecasts of seasonal precipitation and temperature are potentially useful, but the operational water management community currently underutilizes them. However, some agencies in Arizona took unprecedented advantage of forecasts for a potentially wet winter during the 1997–1998 El Niño event. This study investigates use of this information through a series of semi‐structured in‐depth interviews with key personnel from agencies responsible for emergency management and water supply; their jurisdictions ranged from urban to rural and local to regional. Interviews investigated information acquisition, interpretation, and incorporation into specific decisions and actions. While unprecedented actions were taken by some water management agencies and no agencies implemented inappropriate measures, some missed opportunities for more effective response, primarily through inaction. This study reveals a variety of technical factors and institutional characteristics affecting forecast use. Study findings emphasize the need for: (a) closer ongoing relationships between forecast producers and users, (b) increased institutional flexibility to exploit the increasing skill of seasonal climate forecasts, (c) demonstration projects of effective forecast use, and (d) a regional forum to facilitate information transfer between the hydro‐climatic research community and operational water managers.     

Planning routes around the world: International evidence for southern route preferences

Three studies test whether the southern route preference, which describes the tendency for route planners to disproportionately select south- rather than north-going routes, can be attributed to regional elevation patterns; specifically, we ask whether this effect replicates in three topographically disparate international regions, one of which is characterized by higher elevations to the north and lower to the south (Padua, Italy), and two characterized by higher elevations to the south and lower to the north (Enschede, Netherlands; Sofia, Bulgaria). In all cases, we found strong evidence that route planners disproportionately select south- rather than north-going routes at rates exceeding chance. We conclude that the southern route preference is driven by strong associations between canonical direction and perceived effort of route traversal; these effects are somewhat perplexing given that such associations are not founded in the reality of physical space.     

Feeding behavior of the ctenophore <Emphasis Type="Italic">Thalassocalyce inconstans</Emphasis>: revision of anatomy of the order Thalassocalycida

Behavioral observations using a remotely operated vehicle (ROV) in the Gulf of California in March, 2003, provided insights into the vertical distribution, feeding and anatomy of the rare and delicate ctenophore Thalassocalyce inconstans. Additional archived ROV video records from the Monterey Bay Aquarium Research Institute of 288 sightings of T. inconstans and 2,437 individual observations of euphausiids in the Gulf of California and Monterey Canyon between 1989 and 2005 were examined to determine ctenophore and euphausiid prey depth distributions with respect to temperature and dissolved oxygen concentration [dO]. In the Gulf of California most ctenophores (96.9%) were above 350 m, the top of the oxygen minimum layer. In Monterey Canyon the ctenophores were more widely distributed throughout the water column, including the hypoxic zone, to depths as great as 3,500 m. Computer-aided behavioral analysis of two video records of the capture of euphausiids by T. inconstans showed that the ctenophore contracted its bell almost instantly (0.5 s), transforming its flattened, hemispherical resting shape into a closed bi-lobed globe in which seawater and prey were engulfed. Euphausiids entrapped within the globe displayed a previously undescribed escape response for krill (‘probing behavior’), in which they hovered and gently probed the inner surfaces of the globe with antennae without stimulating further contraction by the ctenophore. Such rapid bell contraction could be effected only by a peripheral sphincter muscle even though the presence of circumferential ring musculature was unknown for the Phylum Ctenophora. Thereafter, several live T. inconstans were collected by hand off Barbados and microscopic observations confirmed that assumption.