A statistical model to forecast the profile of the index structure constant $${C_N^2}$$

A statistical study was performed over 145 profiles of meteorological balloons, equipped with microthermal sensors, from the ground to the midstratosphere. This study put into evidence the lognormal distribution of the fluctuations of the structure constant of temperature, the fluctuations of the buoyancy force and the vertical shear of the horizontal wind speed. We show that these quantities, computed over a large scale (100 m), are correlated up to the midstratosphere. A model is adjusted to estimate the optical turbulence strength from the macroscopic meteorological parameters. The model performances, to estimate and forecast the strength and the altitude of the optical turbulent layers, are quantified and compared with other already defined models. This model was shown to have the best performances and put into evidence a new relation to describe the turbulence on a large scale.     

Associations of Forest Cover,Fragment Area,and Connectivity with Neotropical Understory Bird Species Richness and Abundance

Theoretical and empirical studies demonstrate that the total amount of forest and the size and connectivity of fragments have nonlinear effects on species survival. We tested how habitat amount and configuration affect understory bird species richness and abundance. We used mist nets (almost 34,000 net hours) to sample birds in 53 Atlantic Forest fragments in southeastern Brazil. Fragments were distributed among 3 10,800‐ha landscapes. The remaining forest in these landscapes was below (10% forest cover), similar to (30%), and above (50%) the theoretical fragmentation threshold (approximately 30%) below which the effects of fragmentation should be intensified. Species‐richness estimates were significantly higher (F= 3715, p = 0.00) where 50% of the forest remained, which suggests a species occurrence threshold of 30–50% forest, which is higher than usually occurs (<30%). Relations between forest cover and species richness differed depending on species sensitivity to forest conversion and fragmentation. For less sensitive species, species richness decreased as forest cover increased, whereas for highly sensitive species the opposite occurred. For sensitive species, species richness and the amount of forest cover were positively related, particularly when forest cover was 30–50%. Fragment size and connectivity were related to species richness and abundance in all landscapes, not just below the 30% threshold. Where 10% of the forest remained, fragment size was more related to species richness and abundance than connectivity. However, the relation between connectivity and species richness and abundance was stronger where 30% of the landscape was forested. Where 50% of the landscape was forested, fragment size and connectivity were both related to species richness and abundance. Our results demonstrated a rapid loss of species at relatively high levels of forest cover (30–50%). Highly sensitive species were 3‐4 times more common above the 30–50% threshold than below it; however, our results do not support a unique fragmentation threshold. Asociaciones de la Cobertura Forestal, Superficie del Fragmento y Conectividad con la Riqueza y Abundancia de Aves Neotropicales de Sotobosque     

Transport of the insecticides chlorpyrifos,chlorfenvinphos, carbofuran,carbosulfan, and furathiocarb from soil into the foliage of cauliflower and Brussels sprouts plants grown in the field

In several field assays made in different locations in 1988 and 1989, cauliflower and Brussels sprouts plants were treated some days after plantation by pouring onto soil around the stem of the plant one of the insecticides chlorpyrifos, chlorfenvinphos, carbofuran, carbosulfan, or furathiocarb, for protection against the root fly. During plant growth, each of the insecticides (and their soil metabolites) was transported from soil into the plant foliage, where it could give—during a certain period of time—a secondary plant protection against the foliage insects. The foliage concentrations of the non systemic chlorpyrifos and chlorfenvinphos were equal or greater than 1 mg/kg fresh weight during a period of about 44 days after soil treatment in Brussels sprouts crops, and 35 days in cauliflower crops. Comparison of 1988 and 1989 however showed that these periods of time changed according to the weather conditions, especially rainfall. These periods of time were greater when the insecticide soil concentrations were greater—and thus when the rates of insecticide soil metabolism were smaller— and when the rainfall were greater—water transporting the insecticides from soil to the foliage. Similar relationships were observed with the systemic insecticides carbofuran, carbosulfan and furathiocarb; the weights per plant of insecticide compounds transported from soil into the foliage however were greater with these systemic insecticides than they were with the non systemic chlorpyrifos and chlorfenvinphos. The extreme values observed for the periods of time of insecticide foliage concentrations equal or greater than 1 mg/kg fresh weight thus were: 1. in cauliflower crops: 21 to 36 days for chlorpyrifos, and 23 to 39 days for chlorpyrifos + oxon; 24 to 37 days for chlorfenvinphos; 20 to 48 days for carbofuran; 2. in Brussels sprouts crops: 43 to 49 days for chlorpyrifos; 47 to 53 days for chlorpyrifos + oxon; 41 to 45 days for chlorfenvinphos; between 2 to 3 months for carbofuran, carbofuran + carbosulfan, and carbofuran + furathiocarb in the fields treated respectively with either carbofuran, carbosulfan, or furathiocarb. Moreover, in the spring and summer cauliflower crops made on fields onto which continuous cauliflower crops—with their soil insecticide treatments—had been made since a greater number of years (greater soil “history”), the insecticide compounds soil and foliage concentrations generally were lower.     

Soil microbial diversity and C turnover modified by tillage and cropping in Laos tropical grassland

Agricultural practices should modify the diversity of soil microbes. However, the precise relationships between soil properties and microbial diversity are poorly known. Here, we study the effect of agricultural management on soil microbial diversity and C turnover in tropical grassland of north-eastern Laos. Three years after native grassland conversion into agricultural land, we compared soils from five land use management systems: one till versus two no-till rotational cropping systems, one no-till improved pasture and the natural grassland. Soils were incubated in microcosms during 64 days at optimum temperature and humidity. Bacterial and fungal diversity were evaluated by metagenomic 454-pyrosequencing of 16S and 18SrRNA genes, respectively. Changes in soil respiration patterns were evaluated by monitoring ¹²C- and ¹³C-CO₂ release after soil amendment with 13C-labelled wheat residues. Results show that residue mineralization increased with bacterial richness and diversity in the tilled treatment 7 days after soil amendment. Native soil organic C mineralization and priming effect increased with fungal richness and diversity in improved pasture and natural grassland. No-till cropping systems represented intermediate situations between tillage and pasture systems. Our findings evidence the potential of controlling soil microbial diversity by agricultural practices to improve soil biological properties. We suggest the promotion of no-till systems as a fair compromise between the need for agriculture intensification and soil ecological processes preservation.     

Lead availability and phytoextraction in the rhizosphere of Pelargonium species

Environmental Science and Pollution Research - Availability of lead (Pb) in soil is a major factor controlling the phytoremediation efficiency of plants. This study was focused on investigating the...     

Pedogenesis and nickel biogeochemistry in a typical Albanian ultramafic toposequence

This study aimed at relating the variability of Ni biogeochemistry along the ultramafic toposequence to pedogenesis and soil mineralogy. Hypereutric Cambisols dominate upslope; Cambic Vertisols and Fluvic Cambisols occur downslope. The soil mineralogy showed abundance of primary serpentine all over the sequence. It is predominant upslope but secondary smectites dominate in the Vertisols. Free Fe-oxides are abundant in all soils but slightly more abundant in the upslope soils. Whereas serpentines hold Ni in a similar and restricted range in every soil (approx. 0.3 %), Ni contents in smectites may vary a lot and Mg-rich and Al-poor smectites in the Vertisol could hold up to 4.9 % Ni. Ni was probably adsorbed onto amorphous Fe-oxides and was also exchangeable in secondary smectites. High availability of Ni in soils was confirmed by DTPA extractions. However, it varied significantly along the toposequence, being higher in upslope soils, where Ni-bearing amorphous Fe-oxides were abundant and total organic carbon higher and sensibly lower downslope on the Vertisols: Ni_DTPA varied from 285 mg kg^?1 in the surface of soil I (upslope) to 95.9 mg kg^?1 in the surface of Fluvic Cambisols. Concentration of Ni in Alyssum murale shoots varied from 0.7 % (Hypereutric Cambisols) to 1.4 % (Hypereutric Vertisol). Amazingly, Ni uptake by A. murale was not correlated to Ni_DTPA, suggesting the existence of specific edaphic conditions that affect the ecophysiology of A. murale upslope.     

Comparison of DNA extraction methodologies used for assessing fungal diversity via ITS sequencing

Traditional methods of assessing fungal exposure have been confounded by a number of limiting variables. The recent utilization of molecular methods such as internal transcribed spacer (ITS) sequencing of ribosomal RNA genes has provided improved insight into the diversity of fungal bioaerosols in indoor, outdoor and occupational environments. However, ITS analyses may also be confounded by a number of methodological limitations. In this study, we have optimized this technology for use in occupational or environmental studies. Three commonly used DNA extraction methodologies (UltraClean Soil kit, High Pure PCR Template kit, and EluQuik/DNeasy kit) were compared in terms of sensitivity and susceptibility to PCR inhibitors in dust for three common fungal bioaerosols, Aspergillus versicolor, Rhizopus microsporus and Wallemia sebi. Environmental dust samples were then studied using each extraction methodology and results were compared to viable culture data. The extraction methods differed in terms of their ability to efficiently extract DNA from particular species of fungi (e.g. Aspergillus versicolor). In addition, the ability to remove PCR inhibitors from dust samples was most effective using the soil DNA extraction kit. The species composition varied greatly between ITS clone libraries generated with the different DNA extraction kits. However, compared to viable culture data, ITS clone libraries included additional fungal species that are incapable of growth on solid culture medium. Collectively, our data indicated that DNA extraction methodologies used in ITS sequencing studies of occupational or environmental dust samples can greatly influence the fungal species that are detected.     

Environmental evaluation of transfer and treatment of excess pig slurry by life cycle assessment

Slurry management is a central topic in the agronomic and environmental analysis of intensive livestock production systems. The objective of this study is to compare the environmental performance of two scenarios of collective slurry management for the disposal of excess nitrogen from animal manure. The scenarios are the transfer of slurry and its injection to crop land, and the treatment of slurry in a collective biological treatment station. The study is based on a real case in the West of France, where a group of farmers is developing a collective plan for the disposal of almost 7000 m(3) of excess pig slurry. The evaluation is carried out by Life Cycle Assessment, where emissions and resource consumption are quantified and aggregated into four environmental impact categories: eutrophication, acidification, climate change, and non-renewable energy use. Ammonia emitted is the most important contributor to acidification and eutrophication, while methane contributes most to climate change. Both ammonia and methane are mostly emitted during the storage of slurry and, in the case of the treatment scenario, also during composting the solid fraction of the slurry. The two management strategies are similar with respect to climate change, whereas eutrophication and acidification are twice as large for treatment relative to transfer. Electricity needed for the treatment process is the main contributor to non-renewable energy use for the treatment scenario, while the transfer scenario represents a net energy saving, as energy saved by the reduction of mineral fertiliser use more than compensates for the energy needed for transport and injection of slurry. The overall environmental performance of transfer is better than that of treatment, as it involves less acidification, eutrophication and non-renewable energy use. The method employed and the results obtained in this study can provide elements for a transparent discussion of the advantages and disadvantages of contrasting excess slurry management scenarios as well as the identification of the main aspects determining their environmental performance.     

Comparison of several maturity indicators for estimating phytotoxicity in compost-amended soil

Compost can provide a rich organic nutrient source and soil conditioner for agricultural and horticultural applications. Ideal compost amendment rates, however, vary based on starting material and compost maturity or their interaction, and there is little consensus on appropriate methods to gauge maturity. In this study, electrical conductivity, carbon-to-nitrogen ratio, and carbon mineralization measurements were made on compost-amended soils and compared to phytotoxicity measured as cress (Lepidium sativum) germination. Cress germination in soil and compost mixtures incubated for 8-10 days significantly decreased with increasing electrical conductivity and carbon mineralization rate of the mixture and with carbon mineralization rate and mineralizable carbon associated with the compost. Cress germination was not related to carbon-to-nitrogen ratio or pH of soil and compost mixtures. The electrical conductivity of the soil and compost mixtures significantly decreased with decreasing mineralizable carbon suggesting that compounds contributing to electrical conductivity were present in the compost and decomposed upon soil amendment. The results of this study indicate that measurements of mineralizable carbon and mineralization rate of composts in soil, and electrical conductivity and mineralization rate of soil and compost mixtures, can be used as indicators of compost maturity.