Gender impact on first trimester markers in Down syndrome screening

The influence of fetal gender on the level in the first trimester of the serological markers alpha-fetoprotein (AFP), pregnancy-associated plasma protein-A (PAPP-A) and free beta human chorionic gonadotropin (βhCG) and on nuchal translucency is described for 2637 singleton pregnancies with normal outcome. Mean log MoM values for pregnancies with female and male fetuses were calculated using regression of log marker values on gestational age expressed as crown rump length and on maternal weight. A pronounced gender impact was found for free βhCG, being 16% higher for female than for male fetuses. Copyright © 2002 John Wiley & Sons, Ltd.     

Great cormorants (<Emphasis Type="Italic">Phalacrocorax carbo</Emphasis>) can detect auditory cues while diving

In-air hearing in birds has been thoroughly investigated. Sound provides birds with auditory information for species and individual recognition from their complex vocalizations, as well as cues while foraging and for avoiding predators. Some 10% of existing species of birds obtain their food under the water surface. Whether some of these birds make use of acoustic cues while underwater is unknown. An interesting species in this respect is the great cormorant (Phalacrocorax carbo), being one of the most effective marine predators and relying on the aquatic environment for food year round. Here, its underwater hearing abilities were investigated using psychophysics, where the bird learned to detect the presence or absence of a tone while submerged. The greatest sensitivity was found at 2 kHz, with an underwater hearing threshold of 71 dB re 1 μPa rms. The great cormorant is better at hearing underwater than expected, and the hearing thresholds are comparable to seals and toothed whales in the frequency band 1–4 kHz. This opens up the possibility of cormorants and other aquatic birds having special adaptations for underwater hearing and making use of underwater acoustic cues from, e.g., conspecifics, their surroundings, as well as prey and predators.     

The role of sample surveys for monitoring the condition of the nation's lakes

In order to meet a growing need to determine the condition of the nation's ecosystems and how their condition is changing, the U.S. Environmental Protection Agency (EPA) developed EMAP, the Environmental Monitoring and Assessment Program. A common survey design serves as the foundation on which to base monitoring of status and trends among diverse ecosystem types. In this paper, we describe the need for a statistically based survey design, briefly summarize the basic EMAP design, describe how that design is tailored for the selection of a probability sample of lakes on which to make measurements of lake condition, and illustrate the process for selecting a sample of lakes in the northeastern United States. Finally, we illustrate how measurements taken on the sample of lakes can be summarized, with known uncertainty, to describe the condition of a population of lakes.The U.S. Government right to retain a non-exclusive, royalty free licence in and to any copyright is acknowledged.     

Travelling Distances,Modal Split and Transportation Energy in Thirty Residential Areas in Oslo

A study of the use of car and public transport among residents in 30 residential areas in Greater Oslo indicates that urban planning variables have a significant influence on the energy use per capita for local transport. Residents in local communities with a high density and a short distance to downtown Oslo travel considerably shorter distances and use considerably less energy per capita than those who live in low-density, outer areas. This is true also when the effects of other variables are neutralized. The influence of urban planning variables on the modal split is lower than on energy use. The distribution between public and private transport is influenced most of all by car ownership.     

Comprehensive prenatal diagnostics: Exome versus genome sequencing

Objective

This study aimed to assess the diagnostic yield of prenatal genetic testing using trio whole exome sequencing (WES) and trio whole genome sequencing (WGS) in pregnancies with fetal anomalies by comparing the results with conventional chromosomal microarray (CMA) analysis.

Methods

A total of 40 pregnancies with fetal anomalies or increased nuchal translucency (NT ≥ 5 mm) were included between the 12th and 21st week of gestation. Trio WES/WGS and CMA were performed in all cases.

Results

The trio WES/WGS analysis increased the diagnostic yield by 25% in cases with negative CMA results. Furthermore, all six chromosomal aberrations identified by CMA were independently detected by WES/WGS analysis. In total, 16 out of 40 cases obtained a genetic sequence variant, copy number variant, or aneuploidy explaining the phenotype, resulting in an overall WES/WGS diagnostic yield of 40%. WES analysis provided a more reliable identification of mosaic sequence variants than WGS because of its higher sequencing depth.

Conclusions

Prenatal WES/WGS proved to be powerful diagnostic tools for fetal anomalies, surpassing the diagnostic yield of CMA. They have the potential to serve as standalone methods for prenatal diagnosis. The study highlighted the limitations of WGS in accurately detecting mosaic variants, which is particularly relevant when analyzing chorionic villus samples.     

Participatory Forest Management in Ethiopia: Learning from Pilot Projects

Different arrangements of decentralized forest management have been promoted as alternatives to centralized and top down approaches to halt tropical deforestation and forest degradation. Ethiopia is one of the countries piloting one of these approaches. To inform future programs and projects it is essential to learn from existing pilots and experiences. This paper analyses five of the pilot participatory forest management (PFM) programs undertaken in Ethiopia. The study is based on the Forest User Group (FUG) members’ analyses of the programs using selected outcome variables: forest income, change in forest conditions, forest ownership feelings and effectiveness of FUGs as forest managing institutions. These variables were assessed at three points in time—before the introduction of PFM, during the project implementation and after the projects ended. Data were collected using group discussions, key informant interviews and transect walks through the PFM forests. The results show that in all of the five cases the state of the forest is perceived to have improved with the introduction of PFM, and in four of the cases the improvement was maintained after projects ended. Regulated access to the forests following introduction of PFM was not perceived to have affected forest income negatively. There are, however, serious concerns about the institutional effectiveness of the FUGs after projects ended, and this may affect the success of the PFM approach in the longer term.     

Risk as a challenge in practice: investigating climate change in water management

Climate change is one of the risks that society faces today. Among other things, it has the potential to interfere with the water environment, and thus it can be a relevant factor in current work with river basin management plans (RBMPs) in Denmark. At the same time, climate change in theory has characteristics that can pose challenges, if included in such a planning process. In this article, it is investigated what the attitudes towards climate change are among actors in the planning process, and what the main drivers, barriers and challenges related to including climate change in the RBMPs are, compared to the theoretical challenges. The investigation consists of a document study of hearing responses, interviews, and a survey among Danish municipalities. The overall results are that there are many attitudes towards the inclusion of climate change as a factor in RBMPs and that this diversity theoretically can be a challenge in the planning process. The main theoretical and practical barriers and challenges in connection with inclusion of climate change in RBMPs relate to lacking knowledge and uncertainty.     

Importance of timely metadata curation to the global surveillance of genetic diversity

Genetic diversity within species represents a fundamental yet underappreciated level of biodiversity. Because genetic diversity can indicate species resilience to changing climate, its measurement is relevant to many national and global conservation policy targets. Many studies produce large amounts of genome-scale genetic diversity data for wild populations, but most (87%) do not include the associated spatial and temporal metadata necessary for them to be reused in monitoring programs or for acknowledging the sovereignty of nations or Indigenous peoples. We undertook a distributed datathon to quantify the availability of these missing metadata and to test the hypothesis that their availability decays with time. We also worked to remediate missing metadata by extracting them from associated published papers, online repositories, and direct communication with authors. Starting with 848 candidate genomic data sets (reduced representation and whole genome) from the International Nucleotide Sequence Database Collaboration, we determined that 561 contained mostly samples from wild populations. We successfully restored spatiotemporal metadata for 78% of these 561 data sets (n = 440 data sets with data on 45,105 individuals from 762 species in 17 phyla). Examining papers and online repositories was much more fruitful than contacting 351 authors, who replied to our email requests 45% of the time. Overall, 23% of our email queries to authors unearthed useful metadata. The probability of retrieving spatiotemporal metadata declined significantly as age of the data set increased. There was a 13.5% yearly decrease in metadata associated with published papers or online repositories and up to a 22% yearly decrease in metadata that were only available from authors. This rapid decay in metadata availability, mirrored in studies of other types of biological data, should motivate swift updates to data-sharing policies and researcher practices to ensure that the valuable context provided by metadata is not lost to conservation science forever.     

Air-to-vegetation transfer rates of natural submicron aerosols

Submicron aerosol deposition to outdoor vegetation was evaluated by measuring vegetation and air concentrations of ²¹²Pb, ²¹⁴Pb, and ⁷Be attached to atmospheric aerosols. A biomass-normalized deposition velocity (V_D), with units of m³ kg^?1 s^?1, was used to compare species and isotopes with respect to air-to-vegetation transfer rates. For ²¹²Pb ($\text{t}{}_{\mathrm{<mtext>1</mtext><mtext>2</mtext>}}\text{= 10·64 h}$), higher night-time air concebtrations dominate deposition, while for ²¹⁴Pb ($\text{t}{}_{\mathrm{<mtext>1</mtext><mtext>2</mtext>}}\text{= 26·8}\text{min}$), deposition measurements over shorter time periods relative to changing atmospheric conditions were possible. Calculated V_D values were usually higher for ²¹⁴Pb, possibly reflecting wind-enhanced deposition during the afternoon period of sampling. Evergreen species, including pines, were not appreciably different from deciduous species. Most striking was the narrow range of results (factor of 6 for 34 ²¹²Pb measurements of 20 species). Beryllium-7 ($\text{t}{}_{\mathrm{<mtext>1</mtext><mtext>2</mtext>}}\text{= 53·3 d}$) was used to evaluate time-integrated deposition by sampling vegetation in California near the end of dry summers. Similar deposition rates were found for this isotope. The results of the study indicated that naturally radioactive atmospheric aerosols can be used to understand the dynamics of submicron aerosol deposition to ecosystems.