Methane emissions from grazing cattle using point-source dispersion

The ability to accurately measure greenhouse gas (GHG) emissions is essential to gauge our ability to reduce these emissions. Enteric methane from ruminants is an important but often difficult source to quantify since it depends on the amount and type of feed intake. Unfortunately, many of the available measurement techniques for estimating enteric methane emissions can impose a change in feed intake. Our study evaluates a nonintrusive technique that uses a novel approach (point-source dispersion with multiple open-path concentrations) to calculate enteric methane emissions from grazing cattle, reported as the major source of GHG in many countries, particularly Australia. A scanner with a mounted open-path laser was used to measure methane concentration across five paths above a paddock containing 18 grazing cattle over 16 d. These data were used along with wind statistics in a dispersion model (WindTrax) to estimate an average herd methane emission rate over 10-mm intervals. Enteric methane emissions from the herd grazing a combination of Rhodes grass (Chlotis gayana Kunth) and Leucaena [Leucaena leucocephala (Lam.)] averaged (+/- SD) 141 (+/- 147) g animal(-1) d(-1). In a release-recovery experiment, the technique accounted for 77% of the released methane at a single point. Our study shows the technique generates more reliable methane emissions during daytime (unstable stratification).     

In situ bioremediation of an underground diesel fuel spill: A case history

In the winter months of 1983, approximately 1000 gallons of diesel fuel had flowed along an asphalt parking lot of a commercial establishment towards a surface drain near an open creek. Investigations led to the discovery of an underground storage tank leaking diesel fuel. Exploratory borings showed that contamination was near the surface horizon and the capillary zone of the water table. Hydrocarbon quantities ranged up to 1500 mg/kg of soil. The plume continued to move in an eastward direction toward the surface water of the creek. A laboratory study indicated relatively high numbers of hydrocarbon-oxidizing organisms relative to glucose-utilizing microorganisms in the unsaturated vadose zone. Bioreclamation was initiated in April 1984 by injecting nutrients (nitrogen and phosphorus) and hydrogen peroxide and terminated in October 1984 upon no detection (<1 mg/kg) of hydrocarbons. A verification boring within the vicinity of the contaminated plume confirmed that residual contamination had attained background levels. The monitoring program was terminated in January 1987.     

A Sampler for Measuring Deposited Fine Sediments in Streams1

Turner, Andy W., Jeff J. Hillis, and Charles F. Rabeni, 2012. A Sampler for Measuring Deposited Fine Sediments in Streams. Journal of the American Water Resources Association (JAWRA) 48(2): 366‐378. DOI: 10.1111/j.1752‐1688.2011.00618.x Abstract: Improvements and standardization of methodologies to quickly and accurately quantify deposited sediment in streams will allow advances in our understanding of biological effects of sedimentation. Most methods used to evaluate streambed conditions as part of biological monitoring or assessment programs are selected for ease of use, but can be subjective, inappropriate, and often of unknown accuracy. We developed a portable, light‐weight device to quantify deposited unconsolidated sediment (particles <2 mm) in wadeable streams. This deposited sediment sampler is a hand‐held unit that circumscribes an area of the streambed and through suction creates a force that suspends unconsolidated materials into a collector. Laboratory evaluations determined the efficiency (percent of available deposited sediment recovered) of the sampler to collect different sizes and concentrations of deposited sediment under differing streambed conditions, which allowed appropriate correction factors to be applied to each of four categories of streambed particle size. Field trials comparing our sampler to other methods commonly used by many state and federal agencies showed high comparability. The sampler can be constructed in just a few hours from inexpensive, easily obtained materials.     

“Tinni” Rice (Oryza rufipogon Griff.) Production: An Integrated Sociocultural Agroecosystem in Eastern Uttar Pradesh of India

This study reports how Traditional Ecological Knowledge (TEK) and informal cultural institutions have conserved key varieties of the wildgrowing rice, ‘tinni’ (red rice, or brownbeard rice, Oriza rufipogon Griff.), within the Bhar community of eastern Uttar Pradesh, India. The study was conducted, using conventional and participatory methods, in 10 purposively selected Bhar villages. Two distinct varieties of tinni (‘tinni patali’ and ‘tinni moti’) with differing habitats and phenotypic characters were identified. Seven microecosystems (Kari, Badaila, Chammo, Karmol, Bhainsiki, Bhainsala and Khodailia) were found to support these varieties in differing proportions. Tinni rice can withstand more extreme weather conditions (the highest as well as lowest temperatures and rainfall regimes) than the ‘genetically improved’ varieties of rice (Oriza sativa L.) grown in the region. Both tinni varieties are important bioresources for the Bhar’s subsistence livelihoods, and they use distinctive conservation approaches in their maintenance. Bhar women are the main custodians of tinni rice agrobiodiversity, conserving tinni through an institution called Sajha. Democratic decision-making at meetings organized by village elders determines the market price of the tinni varieties. Overall, the indigenous institutions and women’s participation seem to have provided safeguards from excessive exploitation of tinni rice varieties. The maintenance of tinni through cultural knowledge and institutions serves as an example of the importance of locally maintained crop varieties in contributing to people’s resilience and food security in times of rapid social and environmental change.     

Influence of phytase addition to poultry diets on phosphorus forms and solubility in litters and amended soils

Diet modification to decrease phosphorus (P) concentration in animal feeds and manures can reduce surpluses of manure P in areas of intensive animal production. We generated turkey and broiler litters from two and three flock trials, respectively, using diets that ranged from "high" to "low" in non-phytate phosphorus (NPP) and some of which contained feed additives such as phytase. Phosphorus forms in selected litters were analyzed by sequential chemical fractionation and solution (31)P nuclear magnetic resonance (NMR) spectroscopy. Selected litters were also incubated with four contrasting soils. Reducing dietary NPP and using phytase decreased total P in litters by up to 38%. Water-soluble phosphorus (WSP) in litters was decreased 21 to 44% by feeding NPP closer to animal requirement, but was not affected by phytase addition. Solution (31)P NMR spectroscopy showed that feeding NPP closer to requirement decreased orthophosphate in litters by an average of 38% and that adding phytase to feed did not increase the concentration of orthophosphate in litters. Phytase also decreased phytate P in litters by 25 to 38%, demonstrating that it increases phytate P hydrolysis. Incorporation of litters with soils at the same total P rate increased WSP in soils relative to the control; this increase was correlated to soluble P added with litters at 5 d, but not by 29 d. Changes in soil Mehlich-3 phosphorus (M3-P) were related to total P added in litter, rather than soluble P. We conclude that feeding NPP closer to requirement and using feed additives such as phytase decrease total P concentrations in litters, while having little effect on P solubility in litters and amended soils.     

Relating soil phosphorus to dissolved phosphorus in runoff: a single extraction coefficient for water quality modeling

Phosphorus transport from agricultural soils contributes to eutrophication of fresh waters. Computer modeling can help identify agricultural areas with high potential P transport. Most models use a constant extraction coefficient (i.e., the slope of the linear regression between filterable reactive phosphorus [FRP] in runoff and soil P) to predict dissolved P release from soil to runoff, yet it is unclear how variations in soil properties, management practices, or hydrology affect extraction coefficients. We investigated published data from 17 studies that determined extraction coefficients using Mehlich-3 or Bray-1 soil P (mg kg(-1)), water-extractable soil P (mg kg(-1)), or soil P sorption saturation (%) as determined by ammonium oxalate extraction. Studies represented 31 soils with a variety of management conditions. Extraction coefficients from Mehlich-3 or Bray-1 soil P were not significantly different for 26 of 31 soils, with values ranging from 1.2 to 3.0. Extraction coefficients from water-extractable soil P were not significantly different for 17 of 20 soils, with values ranging from 6.0 to 18.3. The relationship between soil P sorption saturation and runoff FRP (microg L(-1)) was the same for all 10 soils investigated, exhibiting a split-line relationship where runoff FRP rapidly increased at P sorption saturation values greater than 12.5%. Overall, a single extraction coefficient (2.0 for Mehlich-3 P data, 11.2 for water-extractable P data, and a split-line relationship for P sorption saturation data) could be used in water quality models to approximate dissolved P release from soil to runoff for the majority of soil, hydrologic, or management conditions. A test for soil P sorption saturation may provide the most universal approximation, but only for noncalcareous soils.     

A Century of Plant Species Loss from an Isolated Fragment of Lowland Tropical Rain Forest

An isolated 4-ha fragment of lowland tropical rain forest has been preserved in the Singapore Botanic Gardens since their founding in 1859. The Botanic Gardens'Jungle has recently had enumerated all woody stems 5 cm diameter at breast height (dbh) and larger and the complete vascular plant flora inventoried. This inventory can be compared with the historic record of the flora of the Gardens'Jungle obtained from the extensive collection of herbarium specimens dating back to the 1890s. Of the 448 historically recorded native species, 220 are still present. Ninety-four native species for which there were no historic records and 80 introduced species were also recorded in the recent inventory. The 50.9% loss of plant species richness over approximately the last century has not been distributed uniformly across plant life-form groups. Tree species have been less likely to go extinct than shrubs, climbers, or epiphytes. But half of the tree species present in 1994 were represented by only one or two individuals ≥ 5 cm dbh and larger. Individual longevity may be the major correlate with persistence of plant species in isolated forest fragments. Shade-tolerant understory shrubs (mostly Rubiaceae ) and rattans ( Palmae ) have been particularly prone to extinction. Some species have probably proliferated during the period of isolation. The tree Calophyllum ferrugineum currently constitutes one quarter of all woody stems. A group of climbers has become very common and covers large areas, probably inhibiting tree regeneration. We conclude that tiny fragments will act as refuges for tropical rain-forest plant species for decades, possibly even centuries after isolation but on their own they will not provide a permanent guarantee of the conservation of tropical biodiversity.     

Temporal stability and spatial divergence of mitochondrial DNA haplotype frequencies in red drum (Sciaenops ocellatus) from coastal regions of the western Atlantic Ocean and Gulf of Mexico

Restriction-site variation in mitochondrial (mt) DNA was assayed among 1675 red drum (Sciaenops ocellatus Linnaeus) sampled from 20 localities along the southeastern coast of the USA (western Atlantic) and the Gulf of Mexico (Gulf). Up to four consecutive year-classes (cohorts) were sampled at most localities. Nucleotide-sequence divergence among 170 mtDNA haplotypes identified ranged (in percentage) from 0.184 to 1.913, with a mean (±SD) of 0.887 ± 0.300. Comparisons of mtDNA haplotype frequencies across year-classes within localities were non-significant, indicating temporal stability of breeding components within localities. Significant heterogeneity in mtDNA haplotype frequencies was found across all localities, between (pooled) samples from the western Atlantic and the Gulf, and among geographically spaced, regional groupings in the Gulf. Genetic divergence between subpopulations of red drum in the western Atlantic and Gulf follows a pattern exhibited in other marine fishes, and probably stems from physical (historical environmental heterogeneity, absence of suitable habitat, and current patterns) and, perhaps, behavioral factors. Genetic differences among red drum in the Gulf appear to be due largely to an isolation-by-distance effect that is attributable to behavioral factors. The latter may include female philopatry to natal bays or estuaries, limited offshore (coastwise) movement of females relative to their natal bay or estuary, or both. Genetic divergence among red drum in the Gulf occurs despite high gene flow (estimated as the number of genetic effective migrants in an island mode). Conservation and management of red drum should be based on the premise that strategies for a given bay or estuary will impact geographically proximal bays or estuaries more than distal ones. Trajectories of correlograms in spatial autocorrelation analysis suggest a geographic neighborhood size, relative to genetic migration of red drum from a bay or estuary, of roughly 500 to 600 km. Received: 22 July 1998 / Accepted: 19 November 1998     

Interactions between macroparasites and microparasites drive infection patterns in free-ranging African buffalo

Epidemiological studies typically focus on single-parasite systems, although most hosts harbor multiple parasite species; thus, the potential impacts of co-infection on disease dynamics are only beginning to be recognized. Interactions between macroparasites, such as gastrointestinal nematodes, and microparasites causing diseases like TB, AIDS, and malaria are particularly interesting because co-infection may favor transmission and progression of these important diseases. Here we present evidence for strong interactions between gastrointestinal worms and bovine tuberculosis (TB) in free-ranging African buffalo (Syncerus caffer). TB and worms are negatively associated at the population, among-herd, and within-herd scales, and this association is not solely the result of demographic heterogeneities in infection. Combining data from 1362 buffalo with simple mechanistic models, we find that both accelerated mortality of co-infected individuals and TB transmission heterogeneity caused by trade-offs in immunity to the two types of parasites likely contribute to observed infection patterns. This study is one of the first to examine the relevance of within-host immunological trade-offs for understanding parasite distribution patterns in natural populations.