Application of Genetic Bottleneck Testing to the Investigation of Amphibian Declines: a Case Study with Natterjack Toads

Abstract: Declines of amphibians are causing widespread concern and in some cases have been explained by factors such as climate change and the spread of microbial pathogens. A problem remains, however, in the unequivocal demonstration of decline in situations where populations may be undergoing natural fluctuations in abundance. We describe the application of a genetic test for bottlenecks ( Cornuet & Luikart 1996 ) that should distinguish between natural oscillations and true population declines. British natterjack toads (   Bufo calamita  ) provide examples of populations that have not declined in recent decades, populations that have declined, and populations in which trends are unclear. Microsatellite allele frequency data from these populations were tested for heterozygote excess and shifts in allele frequency distributions, and inferences from these computations about bottlenecks (i.e., persistently smaller population sizes than the recent means) were compared with demographic information. The genetic test correctly identified bottlenecks and should therefore prove useful in demonstrating whether amphibian declines have occurred where long-term demographic time series are not available.     

Application of the probability-based Maryland Biological Stream Survey to the state’s assessment of water quality standards

The Clean Water Act presents a daunting task for states by requiring them to assess and restore all their waters. Traditional monitoring has led to two beliefs: (1) ad hoc sampling (i.e., non-random) is adequate if enough sites are sampled and (2) more intensive sampling (e.g., collecting more organisms) at each site is always better. We analyzed the 1,500 Maryland Biological Stream Survey (MBSS) random sites sampled in 2000–2004 to describe the variability of Index of Biotic Integrity (IBI) scores at the site, reach, and watershed scales. Average variability for fish and benthic IBI scores increased with increasing spatial scale, demonstrating that single site IBI scores are not representative at watershed scales and therefore at best 25% of a state’s stream length can be representatively sampled with non-random designs. We evaluated the effects on total taxa captured and IBI precision of sampling for twice as many benthic macroinvertebrates at 73 MBSS sites with replicate samples. When sampling costs were fixed, the precision of the IBI decreased as the number of sites had to be reduced by 15%. Only 1% more taxa were found overall when the 73 sites where combined. We concluded that (1) comprehensive assessment of a state’s waters should be done using probability-based sampling that allows the condition across all reaches to be inferred statistically and (2) additional site sampling effort should not be incorporated into state biomonitoring when it will reduce the number of sites sampled to the point where overall assessment precision is lower.     

A Rapid Method to Score Stream Reaches Based on the Overall Performance of Their Main Ecological Functions

A method was developed to score the ecological condition of first- to third-order stream reaches in the Auckland region of New Zealand based on the performance of their key ecological functions. Such a method is required by consultants and resource managers to quantify the reduction in ecological condition of a modified stream reach relative to its unmodified state. This is a fundamental precursor for the determination of fair environmental compensation for achieving no-net-loss in overall stream ecological value. Field testing and subsequent use of the method indicated that it provides a useful measure of ecological condition related to the performance of stream ecological functions. It is relatively simple to apply compared to a full ecological study, is quick to use, and allows identification of the degree of impairment of each of the key ecological functions. The scoring system was designed so that future improvements in the measurement of stream functions can be incorporated into it. Although the methodology was specifically designed for Auckland streams, the principles can be readily adapted to other regions and stream types.     

Differential toxicity of silver and titanium dioxide nanoparticles on Drosophila melanogaster development, reproductive effort, and viability: size, coatings and antioxidants matter

Silver and titanium dioxide nanoparticles are known to induce oxidative stress in vitro and in vivo. Here we test if they impact development, mating success, and survivorship in Drosophila melanogaster, and if so, if these effects are reversible by antioxidants. Ingestion of nanotitanium dioxide during the larval stage of the life cycle showed no effects on development or survivorship, up to doses of 200 μg mL⁻¹. Conversely, ingestion of nanosilver had major dose, size, and coating-dependent effects on each of these aspects of life history. Each of these effects was partially or fully reversible by vitamin C. Larvae growing on nanosilver supplemented with vitamin C showed a greater than twofold increase in survivorship compared to flies reared on nanosilver alone, and a threefold increase in mating success. Vitamin C also rescued cuticular and pigmentation defects in nanosilver fed flies. Biochemical assays of superoxide dismutase and glutathione show these markers respond to nanotitanium dioxide and nanosilver induced oxidative stress, and this response is reduced by vitamin C. These results indicate that life history effects of nanosilver ingestion result from oxidative stress, and suggest antioxidants as a potential remediation for nanosilver toxicity. Conversely, the lack of nanotitanium dioxide life history toxicity shows that oxidative stress does not necessarily result in whole organism effects, and argues that nanoparticle toxicity needs to be examined at different levels of biological organization.     

A Simple Technique for Stack Design in Complex Terrain

The main objective of this study is to apply neutral electrolyzed water (NEW) spraying to inactivate bioaerosols. We evaluated the inactivation efficiency of NEW applied to inactivate two airborne bacterial Escherichia coli and Bacillus subtilis aerosols inside an environmental-controlled chamber in the study. Generated with electrolyzing 6.15 M sodium chloride brine, the NEW with free available chlorine (FAC) concentration 50, 100, and 200 ppm was pumped with an air pressure of 70 kg/cm² through nozzle into the chamber to inactive E. coli and B. subtilis aerosols precontaminated air (initial counts of 3?×?10⁴ colony-forming units [CFU]/m³). Bacterial aerosols were collected and cultured from chamber before and after NEW spray. The air exchange rate (ACH, hr^?1) of the chamber was set to simulate fresh air ventilating dilution of indoor environment. First-order concentration decaying coefficients (Ka, min^?1) of both bacterial aerosols were measured as an index of NEW inactivation efficiency. The result shows that higher FAC concentration of NEW spray caused better inactivation efficiency. The Ka values under ACH 1.0 hr^?1 were 0.537 and 0.598 for E. coli of FAC 50 and 100 ppm spraying, respectively. The Ka values of FAC 100 ppm and 200 ppm spraying for B. subtilis were 0.063 and 0.085 under ACH 1.0 hr^?1, respectively. The results indicated that NEW spray is likely to be effective in inactivation of bacterial airborne contamination. Moreover, it is observed in the study that the increase of ventilation rate and the use of a larger orifice-size nozzle may facilitate the inactivation efficiency.

Implications: Bacterial aerosols have been implicated in deterioration of air quality and occupational health. Effective, safe, and economic control technology is highly demanded, especially for agricultural and food industries. In the study, NEW mist spraying performed effectively in controlling E. coli and B. subtilis modeling bioaerosols contamination. The NEW revealed its potential as an alternative airborne disinfectant worth being discovered for improving the environmental quality in the future.     

Lay perceptions of carbon capture and storage technology

The extent of social acceptance of carbon capture and storage (CCS) is likely to significantly influence the sustainable development of CO₂ storage projects. Acceptance of CCS by the key stakeholders (policy makers, the general public, the media and the local community), linked to specific projects, as well as how the technology is communicated about and perceived by the public, have become matters of interest for the social sciences. This article reports on an investigation of the public perception of CCS technology in Spain. Individuals’ views on CCS are analysed through focus groups with lay citizens using “stimulus materials”. As the analysis shows, lay views of CCS differ significantly from the views of decision-makers and experts. Public concerns and reactions to CCS technology and potential projects, as well as the degree of consensus on its acceptance or rejection are detailed. Implications for the future use of CCS are discussed.     

Rain Water Harvesting in Bermuda1

Rowe, Mark P., 2011. Rain Water Harvesting in Bermuda. Journal of the American Water Resources Association (JAWRA) 47(6):1219–1227. DOI: 10.1111/j.1752‐1688.2011.00563.x Abstract: Roof‐top rain water harvesting is mandated by law for all buildings in Bermuda and is the primary source of water for domestic supply. The average rate at which rain water is harvested at the typical house with four occupants is, however, insufficient to meet average demand. While just over one‐third of households have access to supplementary water either from mains pipelines or private wells, the majority rely on deliveries from water “truckers” (tankers) to augment their rain water supply. Assuming a reasonably constant daily demand, there is a linear relationship between the “maximum optimum capacity” of a water storage tank and the size of the rain water catchment area, which depends on the characteristics of the rainfall at a given geographic location. A simple spreadsheet model was developed to simulate tank storage levels for various combinations of catchment area, tank capacity, and demand, with an input of actual daily rainfall data for a study period of nearly three years. It was found that for typical cycles of rainfall surpluses and deficits in Bermuda, the tank capacity which there is no benefit in exceeding — the “optimum maximum capacity”— is 0.37 m³ of storage capacity per 1 m² of catchment area. Furthermore, it was concluded that many domestic water storage tanks in Bermuda are larger than necessary, especially so where there is a significant imbalance between rain water supply and demand.     

Environmental change and declining resource availability for small-mammal communities in the Great Basin

Changes in climate and land use can impact natural systems across all levels of ecological organization. Most documented and anticipated effects consider species' properties, including phenologies, geographic distributions, and abundances. Responses of higher-level aggregate community or ecosystem properties have not been considered as they are assumed to be relatively stable due to compensatory dynamics and diversity-stability relationships. However, this assumption may not be as fundamental as previously thought. Here we assess stability in the aggregate properties of total abundance, biomass, and energy consumption for small-mammal communities in the Great Basin, using paired historical and modern survey data spanning nearly a century of environmental change. Results show marked declines in each aggregate property independent of spatial scale, elevation, or habitat type, and a reallocation of available biomass and energy favoring diet and habitat generalists. Because aggregate properties directly reflect resource availability, our findings indicate a regionwide decline in resources of 50% over the past century, which may signal a resource crisis. This work illustrates the power of using aggregate properties as indicators of ecological conditions and environmental change at broad spatial and temporal scales.     

Explicitness of consequence information in warnings

Four experiments were carried out to assess effects of product warning explicitness on purchase preferences and caution in use. Explicitness was defined as the specificity or detail with which potential injury consequences were described. All experiments employed a paradigm in which warnings varying in explicitness were described for familiar products. Subjects rated various perceptions of the products, purchase preferences, and intent to act cautiously in using the product. Results indicated that more explicit warnings were associated with greater levels of perceived dangerousness, hazard understanding, injury severity, and manufacturers' concern. While explicit warnings were also associated with an increased intent to act cautiously in using products, no clear relationship was found between explicitness and purchase preferences. It is recommended that product warnings should be explicit regarding injury consequences, especially where injuries may be severe. Given such information, product users, particularly those less familiar with a product, are more likely to exercise greater caution during use. Further, manufacturers' concern that explicit warnings may negatively impact sales appears to be unwarranted.