Horizon scanning for South African biodiversity: A need for social engagement as well as science

Ambio - A horizon scan was conducted to identify emerging and intensifying issues for biodiversity conservation in South Africa over the next 5–10 years. South African biodiversity...     

Polybrominated diphenyl ethers (PBDE) in serum: findings from a US cohort of consumers of sport-caught fish

Polybrominated diphenyl ethers (PBDEs) have been used as flame retardants in foams, fabrics and plastics, and are common contaminants of household air and dust and bioaccumulate in wildlife, and are detectable in human tissues and in fish and animal food products. In the Great Lakes Basin sport fish consumption has been demonstrated to be an important source of PCB and DDE exposure. PBDEs are present in the same sport fish but prior to our study the contribution to human PBDE body burdens from Great Lakes sport fish consumption had not been investigated. This study was designed to assess PBDE, PCB and 1,1-bis(4-chlorophenyl)-2,2-dichloroethene (DDE) serum concentrations in an existing cohort of 508 frequent and infrequent consumers of sport-caught fish living in five Great Lake states. BDE congeners 47 and 99 were identified in the majority of blood samples, 98% and 62% respectively. summation operatorPBDE levels were positively associated with age, hours spent outdoors, DDE, summation operatorPCB, years of sportfish consumption, and catfish and shellfish intake, and negatively associated with income and recent weight loss. Other dietary components collected were not predictive of measured summation operatorPBDE levels. In multivariate models, summation operatorPBDE levels were positively associated with age, years consuming sport fish, shellfish meals, and computer use and negatively associated with recent weight loss. Having summation operatorPBDE levels in the highest quintile was independently associated with older age, male gender, consumption of catfish and shellfish, computer use and spending less time indoors. summation operatorPCB and DDE were strongly associated suggesting common exposure routes. The association between summation operatorPBDE and summation operatorPCB or DDE was much weaker and modeling suggested more diverse PBDE sources with few identified multi-contaminant-shared exposure routes. In our cohort Great Lakes sport fish consumption does not contribute strongly to PBDE exposure.     

Sources of dioxins in the United Kingdom: the steel industry and other sources

Several countries have compiled national inventories of dioxin (polychlorinated dibenzo-p-dioxin [PCDD] and polychlorinated dibenzofuran [PCDF]) releases that detail annual mass emission estimates for regulated sources. High temperature processes, such as commercial waste incineration and iron ore sintering used in the production of iron and steel, have been identified as point sources of dioxins. Other important releases of dioxins are from various diffuse sources such as bonfire burning and domestic heating. The PCDD/F inventory for emissions to air in the UK has decreased significantly from 1995 to 1998 because of reduced emissions from waste incinerators which now generally operate at waste gas stack emissions of 1 ng I-TEQ/Nm3 or below. The iron ore sintering process is the only noteworthy source of PCDD/Fs at integrated iron and steelworks operated by Corus (formerly British Steel plc) in the UK. The mean waste gas stack PCDD/F concentration for this process is 1,2 ng I-TEQ/Nm3 based on 94 measurements and it has been estimated that this results in an annual mass release of approximately 38 g I-TEQ per annum. Diffuse sources now form a major contribution to the UK inventory as PCDD/Fs from regulated sources have decreased, for example, the annual celebration of Bonfire Night on 5th November in the UK causes an estimated release of 30 g I-TEQ, similar to that emitted by five sinter plants in the UK.     

Gladius and its derivatives as potential biosorbents for marine diesel oil

The demand for low cost and effective materials to remove contaminants such as residues of oil spills has encouraged studies on new biosorbents produced from wastes. Considering the overgeneration of fishing residues and the necessity to provide an alternative purpose for such materials, this study aimed to evaluate squid gladius and its derivatives (β-chitin and chitosan) as sorbents to remove marine diesel oil (MDO) from fresh and artificial seawater. It was also executed an attempted to improve their performances through a high-intensity ultrasound treatment (UT-gladius and UT-β-chitin). All sorbents removed MDO at both salinities. Contact surface area, salinity, and water retention seemed to play a key role in the outcomes. UT-β-chitin’s performance was significantly superior to β-chitin’s and chitosan’s in MDO removal at salinity 0, as well as at salinity 30, where gladius and UT-gladius also excelled. Ultrasound treatment improved the oil removal performance of UT-β-chitin by increasing its contact surface area. This is the first report on the efficiency of gladius and UT-β-chitin for such purpose, and brought up huge possibilities and new questions that can lead to the achievement of biosorbents of great efficiency.     

Effects of suspended and sedimented clays on juvenile hard clams,<Emphasis Type="Italic"> Mercenaria mercenaria</Emphasis>, within the context of harmful algal bloom mitigation

Increased interest in using ecologically inert clays to flocculate, sediment, and thus mitigate harmful algal blooms at nearshore mariculture sites has prompted studies on the effectiveness of this method on prolific blooms, such as those caused by the neurotoxic dinoflagellate Karenia brevis in the Gulf of Mexico. Potential repercussions of this control strategy revolve around the increased flux of suspended particles to the benthos. Juvenile suspension-feeding bivalves are potentially vulnerable as they could suffer burial, a decrease in clearance rates, and/or an increase in pseudofeces production in response to suspended clay, leading to reduced growth and delay in attaining size refuge from predators. Here we assess lethal and sublethal effects on juvenile hard clams, Mercenaria mercenaria, in a 2-week flume application of phosphatic clay to simulated blooms of the nontoxic dinoflagellates Heterocapsa triquetra and Prorocentrum micans. Flow regimes simulated two contrasting, worst-case field conditions where (1) low flow allowed complete sedimentation and formation of a benthic sediment layer, and (2) high flow allowed complete particle suspension. No clam mortalities occurred in either treatment. The sedimentation treatment showed variable growth inhibition in shell and/or tissue, but effects were not apparent compared to controls (no sediment layer), and clams rapidly resumed siphon contact with the overlying water column. In contrast, a strong growth effect (~90% reduction in shell and tissue growth) occurred in particle-suspension trials compared to no-clay controls. These results suggest that repeated clay applications in the field are likely more detrimental to clams in a high-energy environment leading to prolonged in situ resuspension of clay than in an environment favoring sedimentation.Communicated by R.J. Thompson, St. Johns     

Maximum entropy modeling of species geographic distributions

The availability of detailed environmental data, together with inexpensive and powerful computers, has fueled a rapid increase in predictive modeling of species environmental requirements and geographic distributions. For some species, detailed presence/absence occurrence data are available, allowing the use of a variety of standard statistical techniques. However, absence data are not available for most species. In this paper, we introduce the use of the maximum entropy method (Maxent) for modeling species geographic distributions with presence-only data. Maxent is a general-purpose machine learning method with a simple and precise mathematical formulation, and it has a number of aspects that make it well-suited for species distribution modeling. In order to investigate the efficacy of the method, here we perform a continental-scale case study using two Neotropical mammals: a lowland species of sloth, Bradypus variegatus, and a small montane murid rodent, Microryzomys minutus. We compared Maxent predictions with those of a commonly used presence-only modeling method, the Genetic Algorithm for Rule-Set Prediction (GARP). We made predictions on 10 random subsets of the occurrence records for both species, and then used the remaining localities for testing. Both algorithms provided reasonable estimates of the species’ range, far superior to the shaded outline maps available in field guides. All models were significantly better than random in both binomial tests of omission and receiver operating characteristic (ROC) analyses. The area under the ROC curve (AUC) was almost always higher for Maxent, indicating better discrimination of suitable versus unsuitable areas for the species. The Maxent modeling approach can be used in its present form for many applications with presence-only datasets, and merits further research and development.     

Migration and habitat of white sharks (<Emphasis Type="Italic">Carcharodon carcharias</Emphasis>) in the eastern Pacific Ocean

Satellite telemetry studies of 20 adult and sub-adult white sharks (360–530 cm estimated total length (TL)) in the eastern North Pacific during 1999–2005 revealed long distance seasonal migrations from the coast of California to an offshore focal area 2,500 km west of the Baja Peninsula, as well as the Hawaii Islands. Three tags were recovered allowing detailed behavioral analyses, including one shark’s migration cycle from the coast to the offshore focal area and back. While near pinniped rookeries in autumn and winter, sharks avoided the surface and used water to 50 m depth, consistent with a silhouette-based hunting strategy. Offshore migrations were initiated during November–March and followed periods of decreasing pinniped abundance. Migrations were highly directed, taking 23 ± 5 days to reach the offshore focal area along similar paths among sharks and years, defining a migration corridor. Sharks exhibited a broad depth distribution (0–644 m) in the offshore focal area, and remained there for up to 167 days during spring and summer, though primary productivity and fishery data suggest that forage resources are scarcer there than in other regions of the eastern North Pacific. Archival data from one shark revealed intensive oscillatory movements while in the offshore focal area, a behavior that may be related to foraging or mating. Sharks traveling to Hawaii remained near the islands up to 122 days, potentially feeding on pelagic fishes and marine mammals that concentrate around the islands. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Concurrent Exposure Assessments of Atrazine and Metolachlor in the Mainstem, Major Tributaries and Small Streams of the Chesapeake Bay Watershed: Indicators of Ecological Risk

The goals of this study were to: (1) measure atrazine and metolachlor concentrations during both high and low use periods in the Chesapeake Bay's mainstem/major tributaries, smaller tributaries and representative small agricultural streams during 1995 and 1996; (2) compare these exposure data with toxicity benchmarks for each herbicide to predict ecological risk and (3) use in-stream fish community data collected in the streams to provide supportive data for ecological risk characterization. Spatially, atrazine (<0.10–98 g/L) and metolachlor (<0.10–68 g/L) concentrations were highest in the streams, followed by the small tributaries (<0.10–11 g/L atrazine; <0.10–8.6 g/L metolachlor) with the lowest concentration in the mainstem Bay/larger tributaries (<0.10–0.22 g/L atrazine; <0.10–0.24 g/L metolachlor). Temporally, concentrations of both herbicides were greatest in all three types of habitats in the late spring and early summer. Concentrations of atrazine and metolachlor were very low or non-detectable in all habitats sampled from early August to mid-April. Toxicity benchmarks of 20 g/L for atrazine based on an ecological No Observed Effect Concentration (NOEC) for microcosm/mesocosm studies and an acute 10th percentile of 53 g/L for metolachlor (protection of ninety % of the species) based on laboratory toxicity data were selected to assess annual and seasonal ecological risk. Both of these toxicity benchmarks were conservative estimates of ecological risk designed to protect the trophic group (plants) most sensitive to these herbicides. Based on a comparison of these toxicity benchmarks with two years of exposure data, the ecological risk from both atrazine and metolachlor exposure in the mainstem Chesapeake Bay/large tributaries, small tributaries and representative agriculturally dominated streams was generally judged to be low. During one 72-h stream rain event in 1995, the atrazine toxicity benchmark (20 g/L) was exceeded during part of the event. However, long-term permanent ecological effects are not expected based on the documented recovery potential of the most sensitive trophic group (plant communities) to the concentrations of atrazine reported and the transient nature of the atrazine pulses. Fish communities at the stream sites receiving the highest concentrations of both herbicides were judged to be healthy based on an Index of Biotic Integrity (IBI) developed for Maryland's coastal plain.     

Is bird song a reliable signal of aggressive intent? A reply

We advocate assessing the reliability of signals of aggressive intent by eliciting aggressive signaling from a subject, giving the subject an opportunity to attack a model, and testing whether the subject’s displays predict a subsequent attack. Using this design, we found that most singing behaviors are poor predictors of attack in song sparrows (Melospiza melodia). Laidre and Vehrencamp (Behav Ecol Sociobiol, DOI 10.1007/s00265-007-0539-3, 2008) suggested altering our experimental design to make the model more realistic; it remains to be seen whether such design changes would change the association between display and attack. Laidre and Vehrencamp (Behav Ecol Sociobiol, DOI 10.1007/s00265-007-0539-3, 2008) also suggested that the reliability of soft song, the one display that predicts attack in song sparrows, can be explained by a vulnerability cost. We question the rationale for a vulnerability cost for this display and suggest instead that soft song has a competing functions cost, in that, by using soft song to counter an intruder, a male sacrifices other possible functions of vocal signaling.     

Resources from another place and time: responses to pulses in a spatially subsidized system

As the theoretical bases for the dynamics of spatially subsidized communities emerge, ecologists question whether spatially subsidized communities exhibit similar structure or dynamics to communities that receive strongly pulsed resources. In both cases, communities may be structured by responses to resources that are potentially absent at any given point in time (pulsed communities) or space (subsidized communities), even if pulsed resources are part of the in situ productivity of the system or the subsidies arrive as a relatively constant input from a nearby system. The potential for significant spatial or temporal resource limitation, therefore, may be a key factor influencing in similar ways the persistence of populations, the structure and dynamics of communities, and the evolution of specific life history traits. In most complex systems, however, multiple resources may arrive for various trophic entities at various points in time and from various points in space, and thus it may be difficult to separate or compare the dynamics of spatially subsidized and pulsed systems. In this paper, we explore the effects of interactions between pulses and subsidies in plant and animal populations and communities on highly pulsed and variably subsidized islands in the Gulf of California. While many of the plant and animal communities on the unsubsidized islands in this system respond to pulses of rain in classic ways, responses to these rain pulses on islands subsidized by seabird guano or other marine resources are quite different and variable, and depend on a combination of life history characteristics, physiology, competitive interactions, and trophic relationships. These variable responses to rain pulses then translate into large differences in dynamics and community structure of subsidized vs. unsubsidized islands. Indeed, most systems experience both temporal pulses and spatial subsidies. When considered in tandem, complementary or synergistic effects of the multiple, temporally and spatially variable resources may emerge that help explain complex food web structure and dynamics.