Metallic and organic contaminants in sediments of Sydney Harbour, Australia and vicinity-- a chemical dataset for evaluating sediment quality guidelines

An internally consistent dataset comprising 103 surficial estuarine sediment samples were collected from Sydney Harbour, Australia and locations south of Sydney. This paper describes the chemical characteristics of the dataset and evaluates its suitability for use in evaluating biological effects-based sediment quality guidelines (SQGs). The sediments contained mixtures of chemicals, the most prevalent chemical classes being metals and polycyclic aromatic hydrocarbons, whereas sediments from coastal lakes/estuaries south of Sydney had low concentrations of contaminants. Maximum concentrations of the prevalent contaminants zinc, lead, copper and pyrene were 11,300, 1,420, 1,060 mg kg(-1) and 23,300 microg kg(-1), respectively. For the majority of samples, concentrations of individual chemicals exceeded most effects-based SQGs that have been adopted for use in Australia, implying occasional or frequent adverse biological effects are expected. Comparing mixtures of contaminants to ranges in numbers of SQGs exceeded and mean SQG quotients showed that most samples (57% to 68%) had contamination characteristics associated with moderate probabilities (30% to 52%) of acute toxicity, based on North American data. A smaller proportion of samples (15% to 17%) had contamination characteristics associated with high probabilities (74% to 85%) of toxicity. The wide range of chemicals and concentrations, associated with low, medium and high probabilities of toxicity, indicated that the dataset was suitable for future use in evaluating predictive abilities of SQGs. This is relevant, given the recent introduction of North American-derived SQGs for Australia.     

Differences in sensitivity to the fungal pathogen Batrachochytrium dendrobatidis among amphibian populations

Contributing to the worldwide biodiversity crisis are emerging infectious diseases, which can lead to extirpations and extinctions of hosts. For example, the infectious fungal pathogen Batrachochytrium dendrobatidis (Bd) is associated with worldwide amphibian population declines and extinctions. Sensitivity to Bd varies with species, season, and life stage. However, there is little information on whether sensitivity to Bd differs among populations, which is essential for understanding Bd‐infection dynamics and for formulating conservation strategies. We experimentally investigated intraspecific differences in host sensitivity to Bd across 10 populations of wood frogs (Lithobates sylvaticus) raised from eggs to metamorphosis. We exposed the post‐metamorphic wood frogs to Bd and monitored survival for 30 days under controlled laboratory conditions. Populations differed in overall survival and mortality rate. Infection load also differed among populations but was not correlated with population differences in risk of mortality. Such population‐level variation in sensitivity to Bd may result in reservoir populations that may be a source for the transmission of Bd to other sensitive populations or species. Alternatively, remnant populations that are less sensitive to Bd could serve as sources for recolonization after epidemic events.     

An experimental set up of a PAH vapour generator and its use to test an annular denuder

The aim of this work is to develop and test a dynamic gas generator for semi-volatile organic compounds (SVOC). A single compound, naphthalene, is used as a surrogate PAH to test the system. The dynamic generation of PAH is based on the permeation technique [Analyst 106 (1981) 817; Am. Ind. Hyg. Assoc. J. 38 (1977) 712]. Monitoring the temperature and measuring the mass of PAH present in the permeation chamber every 48 h gives a direct measurement of the sublimation rate of the PAH. Knowing the flow rate, gives an accurate value of the concentration of PAH from the generator. It was found stable over a period of time under constant operating conditions. This concentration is diluted down to between 0.3 and 30 ppbv by a controlled flow of pure air. The diluting airflow is a mixture of dry and wet air, making it possible to control the relative humidity of the flow from the generator as well as its concentration in PAH. We used this generator to calibrate an annular denuder tube, based on the study by Gundel et al. [Atmos. Environ. 29 (1995) 1719]. Although this technique has been shown to be artefact-free for sampling gaseous PAH [Polycyclic Aromatic Compounds 9 (1996) 67; Atmos. Environ. 28 (1994) 3083], its trapping efficiency still depends on environmental parameters (temperature, relative humidity and sampling duration). Accordingly, we used our generator to calibrate a single annular denuder under controlled conditions (T degrees C, HR%, CPAH, sampling duration). The trapping efficiency of the denuder was calculated by two independent methods. Firstly, by comparing the amount trapped on a denuder with the measured mass sublimated in the generator. Secondly, by putting two denuders in series and comparing the mass collected on the first and the second tube. These two methods gave similar results, within the 10% relative uncertainties of both methods. The first results obtained show that, in environmental conditions, the efficiency ranges between 90 and 100%.     

Detection of Cryptosporidium parvum oocysts in sediment and biosolids by immunomagnetic separation.

A method for the detection of Cryptosporidium parvum oocysts in sediment and wastewater biosolids has been developed using immunomagnetic separation kits that were designed for use with water. This method requires no pretreatment of the sediment or biosolids samples before the commercial kit application. Oocyst recovery efficiencies from sediment and biosolids using the modified Dynal (Lake Success, New York) and Crypto-Scan commercial methods (Immucell Corporation, Portland, Maine) ranged from 20 to 60%. While the sensitivity of the method is dependent on the amount of sediment processed and the equivalent volume examined under the microscope, it was able to detect 0.48 oocysts per gram dry weight sediment. Using this method, Cryptosporidium parvum oocysts were found at levels as high as 97 oocysts/g of primary biosolids and at levels up to 4 oocysts/g in polluted sediment.     

Restoring habitat corridors in fragmented landscapes using optimization and percolation models

Landscape fragmentation and habitat loss are significant threats to the conservation of biological diversity. Creating and restoring corridors between isolated habitat patches can help mitigate or reverse the impacts of fragmentation. It is important that restoration and protection efforts be undertaken in the most efficient and effective way possible because conservation budgets are often severely limited. We address the question of where restoration should take place to efficiently reconnect habitat with a landscape-spanning corridor. Building upon findings in percolation theory, we develop a shortest-path optimization methodology for assessing the minimum amount of restoration needed to establish such corridors. This methodology is applied to large numbers of simulated fragmented landscapes to generate mean and variance statistics for the amount of restoration needed. The results provide new information about the expected level of resources needed to realize different corridor configurations under different degrees of fragmentation and different characterizations of habitat connectivity (“neighbor rules”). These results are expected to be of interest to conservation planners and managers in the allocation of conservation resources to restoration projects.     

Auditing the Accuracy of a Volunteer-Based Surveillance Program for an Aquatic Invader Bythotrephes

We tested the sampling methods of a volunteer-based monitoring program designed to detect the non-indigenous spiny water flea, Bythotrephes longimanus, and found that the program could detect the majority of Bythotrephes invasions. Volunteers take two vertical hauls with a 30 cm diameter net at each of three pelagic stations. To determine if the volunteers were using a large enough net at their three stations, we performed a 17-lake comparison of the volunteer's net with a 75 cm diameter, research-grade net. We found no difference in the number of stations at which Bythotrephes was detected (paired t-test, p = 0.155) with the two nets, because Bythotrephes densities were above the detection limits for both nets. To determine if three stations were sufficient to detect the invader with the volunteer's net, we deployed it at 30 stations in two lakes with average (Harp Lake, 4.17 Bythotrephes m(-3)) vs. low Bythotrephes densities (Sugar Lake, 0.92 m(-3)). In Harp Lake, repeated randomized sampling of the 30 sets of data indicated that only three stations were needed for 100% capture success. In Sugar Lake, seven stations were needed for 100% capture success, but three stations, the current program design, failed to detect the invasion only 14% of the time.     

Impact of the increased adoption of prenatal cfDNA screening on non-profit patient advocacy organizations in the United States

The ‘Stakeholder Perspectives on Noninvasive Prenatal Genetic Screening’ Symposium was held in conjunction with the 2015 annual meeting of the International Society for Prenatal Diagnosis. During the day-long meeting, a panel of patient advocacy group (PAG) representatives discussed concerns and challenges raised by prenatal cell-free DNA (cfDNA) screening, which has resulted in larger demands upon PAGs from concerned patients receiving prenatal cfDNA screening results. Prominent concerns included confusion about the accuracy of cfDNA screening and a lack of patient education resources about genetic conditions included in cfDNA screens. Some of the challenges faced by PAGs included funding limitations, lack of consistently implemented standards of care and oversight, diverse perspectives among PAGs and questions about neutrality, and lack of access to training and genetic counselors. PAG representatives also put forward suggestions for addressing these challenges, including improving educational and PAG funding and increasing collaboration between PAGs and the medical community. © 2016 John Wiley & Sons, Ltd.     

Recruitment to food by the German yellowjacket, Vespula germanica

The hypothesis that Vespula germanica foragers can recruit nestmates to food resources was tested using a protocol that controlled for the biasing effects of social factors at the resource, including local enhancement and food-site marking substances. Foragers from an observation colony in the field were trained to visit a dish of scented corn syrup solution 15?m east of the nest. A second feeding station, 22?m northeast of the nest, offered incoming foragers a choice between food with the training scent and food with a control scent. Significantly more naive foragers arriving at that station chose the food with the training scent. We conclude that the German yellowjacket is able to recruit nestmates to carbohydrate food sources, and that recruits use food odor to locate the source of food being brought into the nest.