Determining the community structure of the coral Seriatopora hystrix from hydrodynamic and genetic networks

The exchange of genetic information between coral reefs through the transport of larvae can be described in terms of networks that capture the linkages between distant populations. A key question arising from these networks is the determination of the highly connected modules (communities). Communities can be defined using genetic similarity or distance statistics between multiple samples but due to limited specimen sampling capacity the boundaries of the communities for the known coral reefs in the seascape remain unresolved. In this study we use the microsatellite composition of individual corals to compare sample populations using a genetic dissimilarity measure (F_ST) which is then used to create a complex network. This network involved sampling 1025 colonies from 22 collection sites and examining 10 microsatellites loci. The links between each sampling site were given a strength that was created from the pair wise F_ST values. The result is an undirected weighted network describing the genetic dissimilarity between each sampled population. From this network we then determined the community structure using a leading eigenvector algorithm within graph theory. However, given the relatively limited sampling conducted, the representation of the regional genetic structure was incomplete. To assist with defining the boundaries of the genetically based communities we also integrated the communities derived from a hydrodynamic and distance based networks. The hydrodynamic network, though more comprehensive, was of smaller spatial extent than our genetic sampling. A Bayesian Belief network was developed to integrate the overlapping communities. The results indicate the genetic population structure of the Great Barrier Reef and provide guidance on where future genetic sampling should take place to complete the genetic diversity mapping.     

Manipulation of density and viscosity for the optimization of DNAPL recovery by alcohol flooding

Laboratory experiments demonstrate that in situ recovery of pooled tetrachloroethene (PCE) from porous media may be accomplished more efficiently using multiple-step alcohol floods than with single alcohol floods. To optimize flooding efficiency while maintaining a low risk of downward DNAPL mobilization, a three-step flooding process is developed employing an isobutanol preflood, a composite alcohol mainflood, and a polymer solution postflood. The density and viscosity of these solutions are manipulated to prevent the onset and propagation of viscous and gravitational fingers, while maintaining phase behavior critical for efficient miscible NAPL displacement. An aqueous partitioning preflood solution of 10% by volume (10% v) isobutanol reduces the NAPL density in situ to approximately 1.00 g/ml by swelling the NAPL prior to miscible displacement induced by the mainflood. The composite alcohol mainflood, containing 65% v ethylene glycol and 35% v 1-propanol maintains miscibility while achieving neutral buoyancy and near stable displacement of the NAPL. Aqueous solutions of xanthan gum polymer efficiently displace the mainflood, reducing viscous fingering associated with waterfloods. Two-dimensional experiments using the multiple-step technique achieve 99.8% DNAPL mass recovery using a total of 0.45 pore volumes of alcohol, illustrating greater recovery efficiency than previous alcohol flooding formulations under comparable conditions.     

Constrained Choice and Climate Change Mitigation in US Agriculture: Structural Barriers to a Climate Change Ethic

This paper examines structural barriers to the adoption of climate change mitigation practices and the evolution of a climate change ethic among American farmers. It examines how seed corn contracts in Michigan constrain the choices of farmers and allow farmers to rationalize the over-application of fertilizer and associated water pollution and greenhouse gas emissions. Seed corn contracts use a competitive “tournament” system where farmers are rewarded for maximizing yields. Interviews and a focus group were used to understand fertilizer over-application and barriers to participating in a climate change mitigation program. Results indicate that farmers agree that they over-apply fertilizer but would be unlikely to participate in a mitigation program due to their contracts and lack of support from seed corn companies. Because only a few companies control access to the seed corn market, farmers feel they have few choices. Farmers rationalized their practices as their only option given the competitive nature of their contracts and blamed other sources of pollution. Despite increasing efforts to educate farmers about climate change, structural barriers will continue to constrain participation in mitigation efforts and the development of a climate change ethic.     

Philippine protected areas are not meeting the biodiversity coverage and management effectiveness requirements of Aichi Target 11

Aichi Target 11 of the Convention on Biological Diversity urges, inter alia, that nations protect at least 17 % of their land, and that protection is effective and targets areas of importance for biodiversity. Five years before reporting on Aichi targets is due, we assessed the Philippines’ current protected area system for biodiversity coverage, appropriateness of management regimes and capacity to deliver protection. Although protected estate already covers 11 % of the Philippines’ land area, 64 % of its key biodiversity areas (KBAs) remain unprotected. Few protected areas have appropriate management and governance infrastructures, funding streams, management plans and capacity, and a serious mismatch exists between protected area land zonation regimes and conservation needs of key species. For the Philippines to meet the biodiversity coverage and management effectiveness elements of Aichi Target 11, protected area and KBA boundaries should be aligned, management systems reformed to pursue biodiversity-led targets and effective management capacity created.     

Mapping species distributions: A comparison of skilled naturalist and lay citizen science recording

To assess the ability of traditional biological recording schemes and lay citizen science approaches to gather data on species distributions and changes therein, we examined bumblebee records from the UK’s national repository (National Biodiversity Network) and from BeeWatch. The two recording approaches revealed similar relative abundances of bumblebee species but different geographical distributions. For the widespread common carder (Bombus pascuorum), traditional recording scheme data were patchy, both spatially and temporally, reflecting active record centre rather than species distribution. Lay citizen science records displayed more extensive geographic coverage, reflecting human population density, thus offering better opportunities to account for recording effort. For the rapidly spreading tree bumblebee (Bombus hypnorum), both recording approaches revealed similar distributions due to a dedicated mapping project which overcame the patchy nature of naturalist records. We recommend, where possible, complementing skilled naturalist recording with lay citizen science programmes to obtain a nation-wide capability, and stress the need for timely uploading of data to the national repository.     

Characteristics of columnar aerosol optical and microphysical properties retrieved from the sun photometer and its impact on radiative forcing over Skukuza (South Africa) during 1999–2010

Environmental Science and Pollution Research - The detailed analysis of columnar optical and microphysical properties of aerosols obtained from the AErosol RObotic NETwork (AERONET) Cimel sun...     

Personal exposure to HBCDs and its degradation products via ingestion of indoor dust

Personal exposures via ingestion of indoor dust to α-, β-, and γ-hexabromocyclododecanes (HBCDs) and the degradation products (pentabromocyclododecenes (PBCDs) and tetrabromocyclododecadienes (TBCDs)) were estimated for 21 UK adults. Under an average dust ingestion scenario, personal exposures ranged from 4.5 to 1851 ng ΣHBCDs day^? 1; while the range under a high dust ingestion scenario was 11 to 4630 ng ΣHBCDs day^? 1. On average, personal exposure to ΣHBCDs via dust ingestion in this study was 35% α-, 11% β-, and 54% γ-HBCD. However, while exposure to β-HBCD (4–18% of ΣHBCDs) was relatively consistent with the proportion of this diastereomer in the HBCD commercial formulation; exposures to α- and γ-isomers (11–58% and 29–82% of ΣHBCDs respectively) showed substantial variation from the commercial formulation pattern. Personal exposures to ΣTBCDs (median = 0.2 ng day^? 1 under an average dust ingestion scenario) and ΣPBCDs (1.4 ng day^? 1) were significantly lower (p < 0.05) than for ΣHBCDs (48 ng day^? 1). Despite this, the exposure of one participant to ΣPBCDs exceeded the exposure to ΣHBCDs received by 85% of the other participants. On average, house dust provided the major contribution to personal exposure via dust ingestion to all target compounds due to the large time fraction spent in houses. In contrast, although participants spent less time in cars than in offices, car dust makes a higher average contribution (17%) to ΣHBCDs exposure than office dust (13%).     

Causes of variability in concentrations and diastereomer patterns of hexabromocyclododecanes in indoor dust

The temporal evolution of concentrations of α-, β-, and γ-hexabromocyclododecanes (HBCDs), and pentabromocyclododecenes (PBCDs — degradation products of HBCDs) was studied in separate aliquots of a well-homogenized indoor dust sample. These were: (a) exposed to natural light, and (b) kept in the dark. Results revealed a rapid photolytically-mediated shift from γ-HBCD to α-HBCD that was complete after 1 week of exposure, and a slower degradative loss of HBCDs via elimination of HBr. Under the specific conditions studied in this experiment, calculated half-lives (t_1/2) showed the decay in ΣHBCDs concentration was faster in light-exposed samples (t_1/2 = 12 weeks), than in light-shielded dust (t_1/2 = 26 weeks). Within-room spatial and temporal variability in concentrations and diastereomer patterns were studied in six and three rooms respectively. While in some rooms, little variability was detected, in others it was substantial. In one room, concentrations of ΣHBCDs and the relative abundance of γ-HBCD declined dramatically with increasing distance from a TV. The same TV appears to have influenced strongly the temporal variation in that room; with higher concentrations observed in its presence and when the TV was moved closer to the area sampled. Significant negative correlation was observed in one room between concentrations of ΣHBCDs and dust loading (g dust m^? 2 floor), implying “dilution” occurs at higher dust loadings.     

Laboratory and field investigations of particulate and carbon monoxide emissions from traditional and improved cookstoves

We implemented a program in which emission characterization is enabled through collaborations between academic, US and international non-governmental entities that focus on evaluation, dissemination, and in-use testing, of improved cookstoves. This effort resulted in a study of field and laboratory emissions from traditional and improved biofuel cookstoves. We found that field measured particulate emissions of actual cooking average three times those measured during simulated cooking in the laboratory. Emission factors are highly dependent on the care and skill of the operator and the resulting combustion; these do not appear to be accurately reproduced in laboratory settings. The single scattering albedo (SSA) of the emissions was very low in both lab and field measurements, averaging about 0.3 for lab tests and around 0.5 for field tests, indicating that the primary particles are climate warming. Over the course of three summers in Honduras, we measured field emissions from traditional cookstoves, relatively new improved cookstoves, and “broken-in” improved cookstoves. We found that well-designed improved cookstoves can significantly reduce PM and CO emission factors below traditional cookstoves. For improved stoves, the presence of a chimney generally resulted in lower emission factors but left the SSA unaffected. Traditional cookstoves had an average PM emission factor of 8.2 g kg^?1 – significantly larger than previous studies. Particulate emission factors for improved cookstoves without and with chimneys averaged about 6.6 g kg^?1 and 4.5 g kg^?1, respectively. The elemental carbon (EC) fraction of PM varied significantly between individual tests, but averaged about 25% for each of the categories.     

Ethnicity,housing and personal factors as determinants of VOC exposures

Previous studies investigating effects of personal, demographic, housing and other factors on exposures to volatile organic compounds (VOC) have focused on mean or median exposures, and generally not the high exposures that are of great interest. This paper identifies determinants of personal VOC exposures on a quantile-specific basis using a nationally representative sample. The NHANES 1999–2000 VOC dataset was merged with personal, demographic, housing, smoking and occupation variables. Bivariate analyses tested for differences in geometric means and quantiles across levels of potential exposure determinants. Multivariate sample-weighted ordinary least-squares (OLS) and quantile regression (QR) models were then used to adjust for covariates. We identify a number of exposure determinants, most of which varied by exposure quantile. The most striking finding was the much higher exposures experienced by Hispanics and Blacks for aromatic VOCs (BTEX: benzene, toluene, ethylbenzene and xylenes), methyl tert-butyl ether (MTBE), and 1,4-dichlorobenzene (DCB). Exposure to gasoline, paints or glues, and having a machine-related occupation also were associated with extremely high BTEX and MTBE exposures. Additional determinants included the presence of attached garages and open windows, which affected exposures of BTEX (especially at lower quantiles) and MTBE (especially at higher quantiles). Smoking also increased BTEX exposures. DCB was associated with air freshener use, and PERC with dry-cleaned clothing. After adjusting for demographic, personal and housing factors, age and gender were not significant predictors of exposure. The use of QR in conjunction with OLS yields a more complete picture of exposure determinants, and identifies subpopulations and heterogeneous exposure groups in which some individuals experience very elevated exposures and which are not well represented by changes in the mean. The high exposures of Hispanics and Blacks are perplexing and disturbing, and they warrant further investigation.