A theoretical and methodological framework for studying and modelling drivers’ mental representations

This article provides a synthetic overview of the research programme carried out at INRETS-LESCOT over the last 10 years, in view to studying and modelling the mental representations of car drivers. Theoretically, this research is in line with two complementary scientific traditions: Human Information Processing theories on the one hand, and theories of Operative Activity on the other. As discussed in Section 1 of the article, attention is given to the functional representations of drivers, constructed “by” and “for” the action, such as they are implemented in a driving situation, and taking into account both implicit and explicit dimensions. This aim directly impacts on the methodological approach implemented, in so far as it entails defining an “experimental continuum” ranging from naturalistic observations of the driving activity (on the open road), to setting up more controlled experimental protocols in order to permit in-depth, systematic and reproducible scientific investigations of drivers’ cognition. Section 2 of the article presents a synthetic view of these methods, while Section 3 presents several significant results obtained with them. Lastly, the final part of the article focuses on the computational formalism defined at INRETS-LESCOT (i.e. the driving schemas) designed to model driver knowledge and mental representations, and developed in a COgnitive Simulation MOdel of the DRIVEr called COSMODRIVE.     

Comparative study of different exposure routes on the biotransformation and genotoxicity of PAHs in the flatfish species, Scophthalmus maximus

In this study, laboratory experiments were carried out in order to come to a better understanding of the fate of polycyclic aromatic hydrocarbons (PAHs) in the marine environment and especially on their bioaccumulation, biotransformation and genotoxic effects in fish. Juveniles of turbot (Scophthalmus maximus) were exposed to PAHs through different routes via (1) a mixture of dissolved PAHs, (2) a PAH-polluted sediment and (3) an oil fuel elutriate. Fish were exposed 4 days followed by a 6-day depuration period. In each experiment, PAH concentrations in the seawater of the tanks were analysed regularly by gas chromatography coupled with mass spectrometry. Muscle and liver samples were also analysed for parent PAH levels and PAH bioconcentration factors were calculated. Biotransformation was evaluated by measuring the levels of PAH metabolites in fish bile. Genotoxicity was assessed by the alkaline comet assay. Regardless of exposure route, the parent PAH concentrations in the liver and muscle showed a peak level 1 day after the beginning of the exposure, followed by a decrease up to the background level towards the end of the experiment, except for the exposure to dissolved PAHs for which levels were relatively low throughout the study. As a consequence, no bioaccumulation was observed in fish tissues at the end of the experiment. In contrast, regardless of exposure routes, a rapid production of biliary metabolites was observed throughout the whole exposure experiment. This was especially true for 1-hydroxypyrene, the major metabolite of pyrene. After 6 days of recovery in clean water, a significant decrease in the total metabolite concentrations occurred in bile. Fish exposed through either route displayed a significant increase in DNA strand breaks after 4 days of exposure, and significant correlations were observed between the level of biliary PAH metabolites and the level of DNA lesions in fish erythrocytes. Overall results indicate that exposure to either a mixture of dissolved PAHs, a PAH-contaminated sediment or a dispersed oil fuel elutriate leads to biotransformation and increase in DNA damage in fish. The quantification of PAH metabolites in bile and DNA damage in erythrocytes appear to be suitable for environmental monitoring of marine pollution either in the case of accidental oil spills or sediment contamination.     

Concomitant Zn-Cd and Pb retention in a carbonated fluvio-glacial deposit under both static and dynamic conditions

The chemical and physical processes involved in the retention of 10(-2)M Zn, Pb and Cd in a calcareous medium were studied under saturated dynamic (column) and static (batch) conditions. Retention in columns decreased in order: Pb>Cd approximately Zn. In the batch experiments, the same order was observed for a contact time of less than 40h and over, Pb>Cd>Zn. Stronger Pb retention is in accordance with the lower solubility of Pb carbonates. However, the equality of retained Zn and Cd does not fit the solubility constants of carbonated solids. SEM analysis revealed that heavy metals and calcareous particles are associated. Pb precipitated as individualized Zn-Cd-Ca- free carbonated crystallites. All the heavy metals were also found to be associated with calcareous particles, without any change in their porosity, pointing to a surface/lattice diffusion-controlled substitution process. Zn and Cd were always found in concomitancy, though Pb fixed separately at the particle circumferences. The Phreeqc 2.12 interactive code was used to model experimental data on the following basis: flow fractionation in the columns, precipitation of Pb as cerrusite linked to kinetically controlled calcite dissolution, and heavy metal sorption onto proton exchanging sites (presumably surface complexation onto a calcite surface). This model simulates exchanges of metals with surface protons, pH buffering and the prevention of early Zn and Cd precipitation. Both modeling and SEM analysis show a probable significant decrease of calcite dissolution along with its contamination with metals.     

Use of ambiguous detections to improve estimates from species distribution models

As large carnivores recover throughout Europe, their distribution needs to be studied to determine their conservation status and assess the potential for human-carnivore conflicts. However, efficient monitoring of many large carnivore species is challenging due to their rarity, elusive behavior, and large home ranges. Their monitoring can include opportunistic sightings from citizens in addition to designed surveys. Two types of detection errors may occur in such monitoring schemes: false negatives and false positives. False-negative detections can be accounted for in species distribution models (SDMs) that deal with imperfect detection. False-positive detections, due to species misidentification, have rarely been accounted for in SDMs. Generally, researchers use ad hoc data-filtering methods to discard ambiguous observations prior to analysis. These practices may discard valuable ecological information on the distribution of a species. We investigated the costs and benefits of including data types that may include false positives rather than discarding them for SDMs of large carnivores. We used a dynamic occupancy model that simultaneously accounts for false negatives and positives to jointly analyze data that included both unambiguous detections and ambiguous detections. We used simulations to compare the performances of our model with a model fitted on unambiguous data only. We tested the 2 models in 4 scenarios in which parameters that control false-positive detections and true detections varied. We applied our model to data from the monitoring of the Eurasian lynx (Lynx lynx) in the European Alps. The addition of ambiguous detections increased the precision of parameter estimates. For the Eurasian lynx, incorporating ambiguous detections produced more precise estimates of the ecological parameters and revealed additional occupied sites in areas where the species is likely expanding. Overall, we found that ambiguous data should be considered when studying the distribution of large carnivores through the use of dynamic occupancy models that account for misidentification.     

Bioremediation of halogenated compounds: comparison of dehalogenating bacteria and improvement of catalyst stability

Five bacterial strains were compared for halogenated compounds conversion in aqueous media. Depending on the strain, the optimal temperature for dehalogenase activity of resting cells varied from 30 to 45 degrees C, while optimal pH raised from 8.4 to 9.0. The most effective dehalogenase activity for 1-chlorobutane conversion was detected with Rhodococcus erythropolis NCIMB13064 and Escherichia coli BL21 (DE3) (DhaA). The presence of 2-chlorobutane or propanal in the aqueous media could inhibit the 1-chlorobutane transformation.     

Socio-environmental implications of process-based restoration strategies in large rivers: should we remove novel ecosystems along the Rhône (France)?

River restoration efforts require interdisciplinary approaches involving fluvial geomorphology, hydraulic engineering, ecology, sedimentology, chemistry, social geography, and sociology. We investigated the functioning of artificial structures called “Casiers Girardon” (groyne fields) in the Rhône River. We assessed potential benefits and risks linked to removing the Rhône groyne fields in a restoration context, with particular focus on the potential for increased bank erosion. Hydraulic, morphological, chemical, ecological, and social issues resulting from dismantlement were studied for terrestrialized and aquatic Casiers Girardon. Only 10% of Casiers Girardon have maintained their aquatic features, whereas most of the Casiers are terrestrialized. Our results help to confirm the effectiveness of restoration actions; however, they also indicate uncertainties and additional knowledge needs, especially in regard to potential incompatibilities between Casier restoration and conservation. Then, an interdisciplinary conceptual model was developed to identify interventions to be considered in Casiers Girardon, according to their terrestrialization rate and physiochemical characteristics (connectivity, amount of gravel vs. fine sediment, contamination level). This model synthetizes scientific results and expert judgment and provides management recommendations based on ecological and sociological expectations about the restoration of Casiers Girardon. The model highlights high heterogeneity in functioning and ecological potential between terrestrialized and aquatic Casiers. Dismantling of terrestrialized Casiers has strong potential to provide multiple benefits, whereas aquatic Casiers could be maintained as valuable backwaters. The managing guidelines for the Casiers Girardon of the Rhône River should be adapted according to local conditions, as well as expected benefits and needs, and conducted in co-ordination with all actors involved in and affected by the restoration.     

Pacific oyster (Crassostrea gigas) hemocyte are not affected by a mixture of pesticides in short-term in vitro assays

Pesticides are frequently detected in estuaries among the pollutants found in estuarine and coastal areas and may have major ecological consequences. They could endanger organism growth, reproduction, or survival. In the context of high-mortality outbreaks affecting Pacific oysters, Crassostrea gigas, in France since 2008, it appears of importance to determine the putative effects of pesticides on oyster susceptibility to infectious agents. Massive mortality outbreaks reported in this species, mainly in spring and summer, may suggest an important role played by the seasonal use of pesticides and freshwater input in estuarine areas where oyster farms are frequently located. To understand the impact of some pesticides detected in French waters, their effects on Pacific oyster hemocytes were studied through short-term in vitro experiments. Bivalve immunity is mainly supported by hemocytes eliminating pathogens by phagocytosis and producing compounds including lysosomal enzymes and antimicrobial molecules. In this study, oyster hemocytes were incubated with a mixture of 14 pesticides and metaldehyde alone, a molecule used to eliminate land mollusks. Hemocyte parameters including dead/alive cells, nonspecific esterase activities, intracytoplasmic calcium, lysosome number and activity, and phagocytosis were monitored by flow cytometry. No significant effect of pesticides tested at different concentrations was reported on oyster hemocytes maintained in vitro for short-term periods in the present study. It could be assumed that these oyster cells were resistant to pesticide exposure in tested conditions and developing in vivo assays appears as necessary to better understand the effects of pollutants on immune system in mollusks.     

Parentage analyses suggest female promiscuity and a disadvantage for athletic males in the colour-polymorphic lizard Podarcis melisellensis

Although laboratory measurements of whole-animal performance have become a standard tool in evolutionary biology, if and how interindividual variation in performance translates into differential fitness remains poorly understood. Particularly rare are studies that have connected performance to mating and reproductive success in the field. In this study, we use DNA microsatellite parentage analyses to study the fitness gradient in a colour-polymorphic lizard, Podarcis melisellensis. We report on two surprising findings. First, contrary to our expectations, individual sprint speed and bite force capacity correlated negatively, not positively, with male mating and reproductive success. Second, we found an unexpected degree of promiscuity in females. Also, contrary to traditional parental investment theory, the variation in mating success and reproductive success was as high in females as in males. Our results call for a better integration of whole-animal performance and life history traits, and for a reconsideration of the ideas on the likeliness of sexual selection acting on female phenotypes.